RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C SSO1P32867 290 aa1.83□□□□□ -2.12
RTT101YJL047C DBP7P36120 742 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C GPX2P38143 162 aa1.83□□□□□ -2.12
RTT101YJL047C FES1P38260 290 aa1.83□□□□□ -2.12
RTT101YJL047C AIM3P38266 947 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C ICE2P40499 491 aa1.83□□□□□ -2.12
RTT101YJL047C GDS1P41913 522 aa1.83□□□□□ -2.12
RTT101YJL047C IDP2P41939 412 aa1.83□□□□□ -2.12
RTT101YJL047C KEG1P43614 200 aa1.83□□□□□ -2.12
RTT101YJL047C IRC7P43623 340 aa1.83□□□□□ -2.12
RTT101YJL047C YJR079WP47126 109 aa1.83□□□□□ -2.12
RTT101YJL047C ADO1P47143 340 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C ALG13P53178 202 aa1.83□□□□□ -2.12
RTT101YJL047C CPD1P53314 239 aa1.83□□□□□ -2.12
RTT101YJL047C MTM1P53320 366 aa1.83□□□□□ -2.12
RTT101YJL047C FRE4P53746 719 aa1.83□□□□□ -2.12
RTT101YJL047C NUP100Q02629 959 aa1.83□□□□□ -2.12
RTT101YJL047C CTF19Q02732 369 aa1.83□□□□□ -2.12
RTT101YJL047C YDC1Q02896 317 aa1.83□□□□□ -2.12
RTT101YJL047C EBS1Q03466 884 aaKnown RBP1.83□□□□□ -2.12
RTT101YJL047C NNT1Q05874 261 aa1.83□□□□□ -2.12
RTT101YJL047C PFA4Q12006 378 aa1.83□□□□□ -2.12
RTT101YJL047C TMS1Q12116 473 aa1.83□□□□□ -2.12
RTT101YJL047C TUS1Q06412 1307 aa1.83□□□□□ -2.12
RTT101YJL047C RPL31AP0C2H8 113 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C ASP3-2P0CX77 362 aa1.82□□□□□ -2.12
RTT101YJL047C ASP3-3P0CX78 362 aa1.82□□□□□ -2.12
RTT101YJL047C ASP3-4P0CX79 362 aa1.82□□□□□ -2.12
RTT101YJL047C ASP3-1P0CZ17 362 aa1.82□□□□□ -2.12
RTT101YJL047C GIT1P25346 518 aa1.82□□□□□ -2.12
RTT101YJL047C LSB5P25369 354 aa1.82□□□□□ -2.12
RTT101YJL047C DCC1P25559 380 aa1.82□□□□□ -2.12
RTT101YJL047C COQ3P27680 312 aa1.82□□□□□ -2.12
RTT101YJL047C EHD3P28817 500 aa1.82□□□□□ -2.12
RTT101YJL047C DEP1P31385 405 aa1.82□□□□□ -2.12
RTT101YJL047C ACB1P31787 87 aa1.82□□□□□ -2.12
RTT101YJL047C LEU5P38702 357 aa1.82□□□□□ -2.12
RTT101YJL047C IKI1P38874 309 aa1.82□□□□□ -2.12
RTT101YJL047C SOP4P39543 234 aaPredicted RBP1.82□□□□□ -2.12
RTT101YJL047C NPT1P39683 429 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C GND2P53319 492 aa1.82□□□□□ -2.12
RTT101YJL047C CAF40P53829 373 aa1.82□□□□□ -2.12
RTT101YJL047C PRP38Q00723 242 aaPredicted RBP1.82□□□□□ -2.12
RTT101YJL047C STP1Q00947 519 aa1.82□□□□□ -2.12
RTT101YJL047C VPS60Q03390 229 aa1.82□□□□□ -2.12
RTT101YJL047C PEX10Q05568 337 aa1.82□□□□□ -2.12
RTT101YJL047C NCA2Q12374 616 aa1.82□□□□□ -2.12
RTT101YJL047C MTF1P14908 341 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C RNA15P25299 296 aaPredicted RBP1.82□□□□□ -2.12
RTT101YJL047C RBK1P25332 333 aa1.82□□□□□ -2.12
RTT101YJL047C CPR3P25719 182 aa1.82□□□□□ -2.12
RTT101YJL047C CDC13P32797 924 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C RAD5P32849 1169 aaPredicted RBP1.82□□□□□ -2.12
RTT101YJL047C LOS1P33418 1100 aaPredicted RBP1.82□□□□□ -2.12
RTT101YJL047C MCR1P36060 302 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C FIG1P38224 298 aa1.82□□□□□ -2.12
RTT101YJL047C YBR096WP38256 230 aa1.82□□□□□ -2.12
RTT101YJL047C YPC1P38298 316 aa1.82□□□□□ -2.12
RTT101YJL047C ATG12P38316 186 aa1.82□□□□□ -2.12
RTT101YJL047C SRP14P38985 146 aa1.82□□□□□ -2.12
RTT101YJL047C BDH2P39713 417 aa1.82□□□□□ -2.12
RTT101YJL047C RBG1P39729 369 aa1.82□□□□□ -2.12
RTT101YJL047C BMT5P40493 336 aa1.82□□□□□ -2.12
RTT101YJL047C SNZ3P43545 298 aa1.82□□□□□ -2.12
RTT101YJL047C WWM1P43582 211 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C CTK3P46963 296 aaPredicted RBP1.82□□□□□ -2.12
RTT101YJL047C LSM1P47017 172 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C TAD2P47058 250 aa1.82□□□□□ -2.12
RTT101YJL047C PHO23P50947 330 aa1.82□□□□□ -2.12
RTT101YJL047C YPT32P51996 222 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C LSG1P53145 640 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C SNZ2P53824 298 aa1.82□□□□□ -2.12
RTT101YJL047C YNL140CP53910 189 aa1.82□□□□□ -2.12
RTT101YJL047C YNL095CP53932 642 aa1.82□□□□□ -2.12
RTT101YJL047C ARK1P53974 638 aa1.82□□□□□ -2.12
RTT101YJL047C ERG13P54839 491 aaKnown RBP1.82□□□□□ -2.12
RTT101YJL047C SPR6Q01684 191 aa1.82□□□□□ -2.12
RTT101YJL047C IRC4Q03036 179 aa1.82□□□□□ -2.12
RTT101YJL047C YDR209CQ03480 137 aa1.82□□□□□ -2.12
RTT101YJL047C BET5Q03630 159 aa1.82□□□□□ -2.12
RTT101YJL047C SPC2Q04969 178 aa1.82□□□□□ -2.12
RTT101YJL047C SEC10Q06245 871 aa1.82□□□□□ -2.12
RTT101YJL047C SSK1Q07084 712 aa1.82□□□□□ -2.12
RTT101YJL047C ESA1Q08649 445 aa1.82□□□□□ -2.12
RTT101YJL047C CSM4Q08955 156 aa1.82□□□□□ -2.12
RTT101YJL047C YDL009CQ12210 107 aa1.82□□□□□ -2.12
RTT101YJL047C PNS1Q12412 539 aa1.82□□□□□ -2.12
RTT101YJL047C CAP2P13517 287 aa1.81□□□□□ -2.12
RTT101YJL047C SNA3P14359 133 aa1.81□□□□□ -2.12
RTT101YJL047C MRPL8P22353 238 aa1.81□□□□□ -2.12
RTT101YJL047C EXG1P23776 448 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C YCR007CP25354 239 aa1.81□□□□□ -2.12
RTT101YJL047C HRR25P29295 494 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C SNC1P31109 117 aa1.81□□□□□ -2.12
RTT101YJL047C QRI5P32344 111 aa1.81□□□□□ -2.12
RTT101YJL047C CSE1P33307 960 aa1.81□□□□□ -2.12
RTT101YJL047C TSA1P34760 196 aaKnown RBP1.81□□□□□ -2.12
RTT101YJL047C RIM2P38127 377 aa1.81□□□□□ -2.12
RTT101YJL047C ARN1P38731 627 aa1.81□□□□□ -2.12
RTT101YJL047C YPT35P38815 214 aaKnown RBP1.81□□□□□ -2.12
Retrieved 100 of 5,963 RNA–protein pairs in 59.2 ms