RNA–Protein interactions for RNA: YIL030C

SSM4, Transcript of Ubiquitin-protein ligase involved in ER-associated protein degradation, yeastyeast

Gene SSM4, Length 3,960 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSM4YIL030C HXT4P32467 576 aa3.29□□□□□ -1.88
SSM4YIL030C ADD66P36040 267 aa3.29□□□□□ -1.88
SSM4YIL030C COS8P38723 381 aa3.29□□□□□ -1.88
SSM4YIL030C HSP10P38910 106 aa3.29□□□□□ -1.88
SSM4YIL030C TES1P41903 349 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C RRN9P53437 365 aa3.29□□□□□ -1.88
SSM4YIL030C TGL2P54857 326 aa3.29□□□□□ -1.88
SSM4YIL030C RIM13Q03792 727 aa3.29□□□□□ -1.88
SSM4YIL030C MED7Q08278 222 aa3.29□□□□□ -1.88
SSM4YIL030C HRK1Q08732 759 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C YLR046CQ12253 270 aa3.29□□□□□ -1.88
SSM4YIL030C YLR126CQ12288 251 aa3.29□□□□□ -1.88
SSM4YIL030C RKM5Q12367 367 aa3.29□□□□□ -1.88
SSM4YIL030C PEX11Q12462 236 aa3.29□□□□□ -1.88
SSM4YIL030C SUS1Q6WNK7 96 aa3.29□□□□□ -1.88
SSM4YIL030C FSH3Q99369 266 aa3.29□□□□□ -1.88
SSM4YIL030C HRP1Q99383 534 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C LEU4P06208 619 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C SSA3P09435 649 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C MNE1P24720 663 aa3.29□□□□□ -1.88
SSM4YIL030C VMA3P25515 160 aa3.29□□□□□ -1.88
SSM4YIL030C ASK1P35734 292 aa3.29□□□□□ -1.88
SSM4YIL030C YBR013CP38215 129 aa3.29□□□□□ -1.88
SSM4YIL030C SHU2P38957 223 aa3.29□□□□□ -1.88
SSM4YIL030C SUR2P38992 349 aa3.29□□□□□ -1.88
SSM4YIL030C MIT1P40002 666 aa3.29□□□□□ -1.88
SSM4YIL030C SMB1P40018 196 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C VPS25P47142 202 aa3.29□□□□□ -1.88
SSM4YIL030C CCC1P47818 322 aa3.29□□□□□ -1.88
SSM4YIL030C FMP41P53889 259 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C TRM44Q02648 567 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C YLL007CQ07799 665 aa3.29□□□□□ -1.88
SSM4YIL030C NOP56Q12460 504 aaKnown RBP RIP-Chip data3.29□□□□□ -1.88not detected
SSM4YIL030C HAA1Q12753 694 aaKnown RBP3.29□□□□□ -1.88
SSM4YIL030C CBS1P14066 229 aa3.28□□□□□ -1.88
SSM4YIL030C MIR1P23641 311 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C FUN19P28003 413 aaPredicted RBP3.28□□□□□ -1.88
SSM4YIL030C CDC5P32562 705 aa3.28□□□□□ -1.88
SSM4YIL030C TIM21P53220 239 aa3.28□□□□□ -1.88
SSM4YIL030C ACS1Q01574 713 aa3.28□□□□□ -1.88
SSM4YIL030C MAK3Q03503 176 aa3.28□□□□□ -1.88
SSM4YIL030C IPK1Q06667 281 aa3.28□□□□□ -1.88
SSM4YIL030C YFR010W-AP0C5N0 62 aa3.28□□□□□ -1.88
SSM4YIL030C SCH9P11792 824 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C MAS2P11914 482 aa3.28□□□□□ -1.88
SSM4YIL030C SST2P11972 698 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C AAC3P18238 307 aa3.28□□□□□ -1.88
SSM4YIL030C ART10P18634 518 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C GPI12P23797 304 aa3.28□□□□□ -1.88
SSM4YIL030C GEX1P25596 615 aa3.28□□□□□ -1.88
SSM4YIL030C ASH1P34233 588 aa3.28□□□□□ -1.88
SSM4YIL030C GEX2P36173 615 aa3.28□□□□□ -1.88
SSM4YIL030C SDS24P38314 527 aa3.28□□□□□ -1.88
SSM4YIL030C YPT31P38555 223 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C RTT105P40063 208 aa3.28□□□□□ -1.88
SSM4YIL030C YJL068CP40363 299 aa3.28□□□□□ -1.88
SSM4YIL030C MNT3P40549 630 aa3.28□□□□□ -1.88
SSM4YIL030C ART5P53244 586 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C DMA2P53924 522 aa3.28□□□□□ -1.88
SSM4YIL030C PNG1Q02890 363 aa3.28□□□□□ -1.88
SSM4YIL030C HAS1Q03532 505 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C ERP1Q05359 219 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C YDR344CQ05510 147 aa3.28□□□□□ -1.88
SSM4YIL030C CIA1Q05583 330 aa3.28□□□□□ -1.88
SSM4YIL030C RDR1Q08904 546 aa3.28□□□□□ -1.88
SSM4YIL030C YOR387CQ08910 206 aa3.28□□□□□ -1.88
SSM4YIL030C SRO7Q12038 1033 aa3.28□□□□□ -1.88
SSM4YIL030C MIH1P23748 554 aa3.28□□□□□ -1.88
SSM4YIL030C SCO1P23833 295 aa3.28□□□□□ -1.88
SSM4YIL030C RPL24BP24000 155 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C SPS18P32572 300 aa3.28□□□□□ -1.88
SSM4YIL030C HTD2P38790 280 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C ASP1P38986 381 aaPredicted RBP3.28□□□□□ -1.88
SSM4YIL030C NEO1P40527 1151 aa3.28□□□□□ -1.88
SSM4YIL030C LSB3P43603 459 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C NUP57P48837 541 aa3.28□□□□□ -1.88
SSM4YIL030C RNH70P53331 553 aa3.28□□□□□ -1.88
SSM4YIL030C RCR2Q03446 210 aaKnown RBP3.28□□□□□ -1.88
SSM4YIL030C DDC1Q08949 612 aa3.28□□□□□ -1.88
SSM4YIL030C MTR10Q99189 972 aa3.28□□□□□ -1.88
SSM4YIL030C RPS21AP0C0V8 87 aaKnown RBP3.27□□□□□ -1.89
SSM4YIL030C TY1A-LR4P0C2I8 440 aaKnown RBP3.27□□□□□ -1.89
SSM4YIL030C TY1A-DR6P0CX70 440 aa3.27□□□□□ -1.89
SSM4YIL030C TY1A-ER1P0CX71 440 aa3.27□□□□□ -1.89
SSM4YIL030C TY1A-LR2P0CX72 440 aa3.27□□□□□ -1.89
SSM4YIL030C TY1A-PLP0CX73 440 aa3.27□□□□□ -1.89
SSM4YIL030C TY1A-JR1P0CX74 440 aa3.27□□□□□ -1.89
SSM4YIL030C TY1A-LR3P0CX75 440 aa3.27□□□□□ -1.89
SSM4YIL030C TY1A-ML2P0CX76 440 aa3.27□□□□□ -1.89
SSM4YIL030C SEC17P32602 292 aa3.27□□□□□ -1.89
SSM4YIL030C SRX1P36077 127 aa3.27□□□□□ -1.89
SSM4YIL030C TAT2P38967 592 aa3.27□□□□□ -1.89
SSM4YIL030C SSN3P39073 555 aa3.27□□□□□ -1.89
SSM4YIL030C RGI2P40188 164 aa3.27□□□□□ -1.89
SSM4YIL030C YIL060WP40519 144 aa3.27□□□□□ -1.89
SSM4YIL030C ATG18P43601 500 aa3.27□□□□□ -1.89
SSM4YIL030C DUG1P43616 481 aaKnown RBP3.27□□□□□ -1.89
SSM4YIL030C PYK2P52489 506 aaKnown RBP3.27□□□□□ -1.89
SSM4YIL030C YGL101WP53144 215 aa3.27□□□□□ -1.89
SSM4YIL030C NPY1P53164 384 aa3.27□□□□□ -1.89
Retrieved 100 of 5,963 RNA–protein pairs in 80.6 ms