RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C YPR127WQ06494 345 aa11.75□□□□□ -0.53
SHU1YHL006C YPL191CQ08930 360 aa11.75□□□□□ -0.53
SHU1YHL006C YDL176WQ12027 708 aa11.75□□□□□ -0.53
SHU1YHL006C DBP10Q12389 995 aaKnown RBP11.75□□□□□ -0.53
SHU1YHL006C TRS65P32893 560 aa11.74□□□□□ -0.53
SHU1YHL006C SOF1P33750 489 aaKnown RBP11.74□□□□□ -0.53
SHU1YHL006C AIM3P38266 947 aaKnown RBP11.74□□□□□ -0.53
SHU1YHL006C RPP1P38786 293 aa11.74□□□□□ -0.53
SHU1YHL006C KRE29P40026 464 aa11.74□□□□□ -0.53
SHU1YHL006C IDP2P41939 412 aa11.74□□□□□ -0.53
SHU1YHL006C BAT2P47176 376 aaKnown RBP11.74□□□□□ -0.53
SHU1YHL006C PCP1P53259 346 aa11.74□□□□□ -0.53
SHU1YHL006C SEC13Q04491 297 aaKnown RBP11.74□□□□□ -0.53
SHU1YHL006C YPR147CQ06522 304 aaKnown RBP11.74□□□□□ -0.53
SHU1YHL006C PEP4P07267 405 aaKnown RBP11.73□□□□□ -0.53
SHU1YHL006C PDB1P32473 366 aaKnown RBP11.73□□□□□ -0.53
SHU1YHL006C HCS1P34243 683 aa11.73□□□□□ -0.53
SHU1YHL006C IRC7P43623 340 aa11.73□□□□□ -0.53
SHU1YHL006C GPI8P49018 411 aa11.73□□□□□ -0.53
SHU1YHL006C SET6Q12529 373 aa11.73□□□□□ -0.53
SHU1YHL006C PDA1P16387 420 aaKnown RBP11.72□□□□□ -0.53
SHU1YHL006C NUP1P20676 1076 aa11.72□□□□□ -0.53
SHU1YHL006C YKL077WP36081 392 aa11.72□□□□□ -0.53
SHU1YHL006C ARN2P38724 620 aa11.72□□□□□ -0.53
SHU1YHL006C GAT2P40209 560 aa11.72□□□□□ -0.53
SHU1YHL006C MRP51Q02950 344 aa11.72□□□□□ -0.53
SHU1YHL006C MRPL1Q04599 285 aa11.72□□□□□ -0.53
SHU1YHL006C NIP7Q08962 181 aaKnown RBP11.72□□□□□ -0.53
SHU1YHL006C YPR015CQ12531 247 aa11.72□□□□□ -0.53
SHU1YHL006C CDC4P07834 779 aa11.71□□□□□ -0.53
SHU1YHL006C YOL162WP0CF19 215 aa11.71□□□□□ -0.53
SHU1YHL006C PMR1P13586 950 aa11.71□□□□□ -0.53
SHU1YHL006C AVT7P40501 490 aa11.71□□□□□ -0.53
SHU1YHL006C DAM1P53267 343 aa11.71□□□□□ -0.53
SHU1YHL006C MRPL19P53875 158 aa11.71□□□□□ -0.53
SHU1YHL006C YMR102CQ03177 834 aa11.71□□□□□ -0.53
SHU1YHL006C HFD1Q04458 532 aa11.71□□□□□ -0.53
SHU1YHL006C MCM10P32354 571 aa11.7□□□□□ -0.54
SHU1YHL006C PUP2P32379 260 aa11.7□□□□□ -0.54
SHU1YHL006C MSN4P33749 630 aa11.7□□□□□ -0.54
SHU1YHL006C FET3P38993 636 aa11.7□□□□□ -0.54
SHU1YHL006C YIL165CP40446 119 aa11.7□□□□□ -0.54
SHU1YHL006C BRR6P53062 197 aa11.7□□□□□ -0.54
SHU1YHL006C HRT1Q08273 121 aa11.7□□□□□ -0.54
SHU1YHL006C NFI1Q12216 726 aa11.7□□□□□ -0.54
SHU1YHL006C YOR097CQ12274 175 aaPredicted RBP11.7□□□□□ -0.54
SHU1YHL006C APC2Q12440 853 aa11.7□□□□□ -0.54
SHU1YHL006C MHF1Q3E835 90 aa11.7□□□□□ -0.54
SHU1YHL006C PRE2P30656 287 aaKnown RBP11.69□□□□□ -0.54
SHU1YHL006C THI4P32318 326 aa11.69□□□□□ -0.54
SHU1YHL006C ASF2P32448 525 aaPredicted RBP11.69□□□□□ -0.54
SHU1YHL006C NAB2P32505 525 aaKnown RBP RIP-Chip data11.69□□□□□ -0.54not detected
SHU1YHL006C YKL071WP36086 256 aa11.69□□□□□ -0.54
SHU1YHL006C MAL32P38158 584 aa11.69□□□□□ -0.54
SHU1YHL006C ELA1P53861 379 aaPredicted RBP11.69□□□□□ -0.54
SHU1YHL006C HAS1Q03532 505 aaKnown RBP11.69□□□□□ -0.54
SHU1YHL006C RSM24Q03976 319 aa11.69□□□□□ -0.54
SHU1YHL006C SNT309Q06091 175 aaPredicted RBP11.69□□□□□ -0.54
SHU1YHL006C MED2Q12124 431 aa11.69□□□□□ -0.54
SHU1YHL006C YOL159C-AQ3E769 90 aa11.69□□□□□ -0.54
SHU1YHL006C CLB4P24871 460 aa11.68□□□□□ -0.54
SHU1YHL006C NAB3P38996 802 aaKnown RBP RIP-Chip data11.68□□□□□ -0.54not detected
SHU1YHL006C GDI1P39958 451 aaKnown RBP11.68□□□□□ -0.54
SHU1YHL006C NAS2P40555 220 aa11.68□□□□□ -0.54
SHU1YHL006C YJR098CP47139 656 aa11.68□□□□□ -0.54
SHU1YHL006C YGR168CP53293 376 aa11.68□□□□□ -0.54
SHU1YHL006C DML1Q03652 475 aa11.68□□□□□ -0.54
SHU1YHL006C HMS1Q12398 434 aa11.68□□□□□ -0.54
SHU1YHL006C YHR214C-EQ8TGK0 99 aa11.68□□□□□ -0.54
SHU1YHL006C RPC40P07703 335 aaKnown RBP11.67□□□□□ -0.54
SHU1YHL006C HAP4P14064 554 aa11.67□□□□□ -0.54
SHU1YHL006C MRPL16P38064 232 aa11.67□□□□□ -0.54
SHU1YHL006C RMR1P53060 241 aa11.67□□□□□ -0.54
SHU1YHL006C SNO4Q04902 237 aa11.67□□□□□ -0.54
SHU1YHL006C HSP33Q08914 237 aaKnown RBP11.67□□□□□ -0.54
SHU1YHL006C HSP32Q08992 237 aa11.67□□□□□ -0.54
SHU1YHL006C SPC3Q12133 184 aa11.67□□□□□ -0.54
SHU1YHL006C YBL029C-AQ3E756 94 aa11.67□□□□□ -0.54
SHU1YHL006C RPL24AP04449 155 aaKnown RBP11.66□□□□□ -0.54
SHU1YHL006C SEC12P11655 471 aa11.66□□□□□ -0.54
SHU1YHL006C PRP28P23394 588 aa11.66□□□□□ -0.54
SHU1YHL006C PPG1P32838 368 aa11.66□□□□□ -0.54
SHU1YHL006C YKL187CP34231 750 aa11.66□□□□□ -0.54
SHU1YHL006C SPC34P36131 295 aa11.66□□□□□ -0.54
SHU1YHL006C PRS3P38689 320 aaKnown RBP11.66□□□□□ -0.54
SHU1YHL006C ACS2P52910 683 aaKnown RBP11.66□□□□□ -0.54
SHU1YHL006C DMA2P53924 522 aa11.66□□□□□ -0.54
SHU1YHL006C TIM10P87108 93 aa11.66□□□□□ -0.54
SHU1YHL006C YAP6Q03935 383 aa11.66□□□□□ -0.54
SHU1YHL006C HMO1Q03973 246 aaKnown RBP11.66□□□□□ -0.54
SHU1YHL006C AGE1Q04412 482 aa11.66□□□□□ -0.54
SHU1YHL006C YLR126CQ12288 251 aa11.66□□□□□ -0.54
SHU1YHL006C ITR1P30605 584 aa11.65□□□□□ -0.54
SHU1YHL006C NIC96P34077 839 aa11.65□□□□□ -0.54
SHU1YHL006C RSM22P36056 628 aa11.65□□□□□ -0.54
SHU1YHL006C CTF8P38877 133 aa11.65□□□□□ -0.54
SHU1YHL006C VHR1P40522 640 aa11.65□□□□□ -0.54
SHU1YHL006C DIM1P41819 318 aaKnown RBP11.65□□□□□ -0.54
SHU1YHL006C MOB2P43563 287 aa11.65□□□□□ -0.54
SHU1YHL006C YDR102CQ03864 110 aa11.65□□□□□ -0.54
Retrieved 100 of 5,963 RNA–protein pairs in 44.8 ms