RNA–Protein interactions for RNA: YDR364C

CDC40, Transcript of Pre-mRNA splicing factor, yeastyeast

Gene CDC40, Length 1,368 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC40YDR364C CDC21P06785 304 aa3.06□□□□□ -1.92
CDC40YDR364C CPA1P07258 411 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C MSF1P08425 469 aa3.06□□□□□ -1.92
CDC40YDR364C NFT1P0CE68 1218 aa3.06□□□□□ -1.92
CDC40YDR364C RSR1P13856 272 aa3.06□□□□□ -1.92
CDC40YDR364C SAG1P20840 650 aa3.06□□□□□ -1.92
CDC40YDR364C EPT1P22140 391 aa3.06□□□□□ -1.92
CDC40YDR364C RPI1P23250 407 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C FUN19P28003 413 aaPredicted RBP3.06□□□□□ -1.92
CDC40YDR364C ZIP1P31111 875 aa3.06□□□□□ -1.92
CDC40YDR364C ATP11P32453 318 aa3.06□□□□□ -1.92
CDC40YDR364C PRP21P32524 280 aaPredicted RBP3.06□□□□□ -1.92
CDC40YDR364C SPS19P32573 292 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C NRP1P32770 719 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
CDC40YDR364C YKL097CP34245 136 aa3.06□□□□□ -1.92
CDC40YDR364C PTC1P35182 281 aa3.06□□□□□ -1.92
CDC40YDR364C SOR1P35497 357 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C ARN1P38731 627 aa3.06□□□□□ -1.92
CDC40YDR364C YHR045WP38775 560 aa3.06□□□□□ -1.92
CDC40YDR364C UBA4P38820 440 aa3.06□□□□□ -1.92
CDC40YDR364C GPI16P38875 610 aa3.06□□□□□ -1.92
CDC40YDR364C MNN9P39107 395 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C RPS14BP39516 138 aaKnown RBP3.06□□□□□ -1.92
CDC40YDR364C UTP18P40362 594 aaPredicted RBP3.06□□□□□ -1.92
CDC40YDR364C SYG1P40528 902 aa3.06□□□□□ -1.92
CDC40YDR364C TIS11P47977 285 aa3.06□□□□□ -1.92
CDC40YDR364C MIG2P53035 382 aa3.06□□□□□ -1.92
CDC40YDR364C COG7P53195 279 aa3.06□□□□□ -1.92
CDC40YDR364C RPN14P53196 417 aa3.06□□□□□ -1.92
CDC40YDR364C NOP19P53317 196 aaPredicted RBP3.06□□□□□ -1.92
CDC40YDR364C DSL1P53847 754 aa3.06□□□□□ -1.92
CDC40YDR364C ASI1P54074 624 aa3.06□□□□□ -1.92
CDC40YDR364C SMA1Q02651 245 aa3.06□□□□□ -1.92
CDC40YDR364C TLG1Q03322 224 aa3.06□□□□□ -1.92
CDC40YDR364C CCE1Q03702 353 aa3.06□□□□□ -1.92
CDC40YDR364C GRX3Q03835 250 aa3.06□□□□□ -1.92
CDC40YDR364C TRM12Q04235 462 aa3.06□□□□□ -1.92
CDC40YDR364C SCW10Q04951 389 aa3.06□□□□□ -1.92
CDC40YDR364C BCH1Q05029 724 aa3.06□□□□□ -1.92
CDC40YDR364C NDL1Q06568 189 aa3.06□□□□□ -1.92
CDC40YDR364C YDL218WQ07629 317 aa3.06□□□□□ -1.92
CDC40YDR364C SOR2Q07786 357 aa3.06□□□□□ -1.92
CDC40YDR364C YEH2Q07950 538 aa3.06□□□□□ -1.92
CDC40YDR364C GSH2Q08220 491 aa3.06□□□□□ -1.92
CDC40YDR364C ESA1Q08649 445 aa3.06□□□□□ -1.92
CDC40YDR364C RKM1Q08961 583 aaPredicted RBP3.06□□□□□ -1.92
CDC40YDR364C FAB1P34756 2278 aa3.06□□□□□ -1.92
CDC40YDR364C COX3P00420 269 aa3.05□□□□□ -1.92
CDC40YDR364C YAR066WP0CX18 203 aa3.05□□□□□ -1.92
CDC40YDR364C YHR214WP0CX19 203 aa3.05□□□□□ -1.92
CDC40YDR364C POL30P15873 258 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C YAP1P19880 650 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C FPR1P20081 114 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C DBR1P24309 405 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C PPZ1P26570 692 aa3.05□□□□□ -1.92
CDC40YDR364C RPS1AP33442 255 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C YPT52P36018 234 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C TAE1P38340 232 aa3.05□□□□□ -1.92
CDC40YDR364C CYC2P38909 366 aa3.05□□□□□ -1.92
CDC40YDR364C NPT1P39683 429 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C MAM33P40513 266 aa3.05□□□□□ -1.92
CDC40YDR364C GCD10P41814 478 aa3.05□□□□□ -1.92
CDC40YDR364C AGX1P43567 385 aa3.05□□□□□ -1.92
CDC40YDR364C UBP8P50102 471 aa3.05□□□□□ -1.92
CDC40YDR364C YGL114WP53134 725 aa3.05□□□□□ -1.92
CDC40YDR364C YNL260CP53846 198 aa3.05□□□□□ -1.92
CDC40YDR364C PRP38Q00723 242 aaPredicted RBP3.05□□□□□ -1.92
CDC40YDR364C GAS3Q03655 524 aa3.05□□□□□ -1.92
CDC40YDR364C YDR387CQ04162 555 aa3.05□□□□□ -1.92
CDC40YDR364C HSP31Q04432 237 aa3.05□□□□□ -1.92
CDC40YDR364C YMR310CQ04867 317 aaPredicted RBP3.05□□□□□ -1.92
CDC40YDR364C GLO2Q05584 274 aa3.05□□□□□ -1.92
CDC40YDR364C MSC3Q05812 728 aa3.05□□□□□ -1.92
CDC40YDR364C MDM30Q05930 598 aa3.05□□□□□ -1.92
CDC40YDR364C IPK1Q06667 281 aa3.05□□□□□ -1.92
CDC40YDR364C SGT1Q08446 395 aa3.05□□□□□ -1.92
CDC40YDR364C SRL1Q08673 210 aa3.05□□□□□ -1.92
CDC40YDR364C SNX3Q08826 162 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C YOR365CQ08844 703 aa3.05□□□□□ -1.92
CDC40YDR364C SLF1Q12034 447 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C NSL1Q12143 216 aa3.05□□□□□ -1.92
CDC40YDR364C RDL1Q12305 139 aaKnown RBP3.05□□□□□ -1.92
CDC40YDR364C GLE1Q12315 538 aa3.05□□□□□ -1.92
CDC40YDR364C YOR012WQ12351 137 aa3.05□□□□□ -1.92
CDC40YDR364C SFG1Q12507 346 aa3.05□□□□□ -1.92
CDC40YDR364C ADF1Q2V2Q1 113 aa3.05□□□□□ -1.92
CDC40YDR364C RPL24AP04449 155 aaKnown RBP3.04□□□□□ -1.92
CDC40YDR364C YER190C-BP0CX94 160 aa3.04□□□□□ -1.92
CDC40YDR364C YEL077W-AP0CX95 160 aa3.04□□□□□ -1.92
CDC40YDR364C YGR296C-BP0CX96 160 aa3.04□□□□□ -1.92
CDC40YDR364C YPL283W-BP0CX97 160 aa3.04□□□□□ -1.92
CDC40YDR364C YPR204C-AP0CX98 160 aa3.04□□□□□ -1.92
CDC40YDR364C BAR1P12630 587 aa3.04□□□□□ -1.92
CDC40YDR364C CCA1P21269 546 aa3.04□□□□□ -1.92
CDC40YDR364C MAK32P23060 363 aa3.04□□□□□ -1.92
CDC40YDR364C CNA1P23287 553 aa3.04□□□□□ -1.92
CDC40YDR364C CSM1P25651 190 aa3.04□□□□□ -1.92
CDC40YDR364C ATP7P30902 174 aa3.04□□□□□ -1.92
CDC40YDR364C CYS4P32582 507 aaKnown RBP3.04□□□□□ -1.92
CDC40YDR364C CSE1P33307 960 aa3.04□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 19.1 ms