RNA–Protein interactions for RNA: YDR356W

SPC110, Transcript of Inner plaque spindle pole body (SPB) component, yeastyeast

Gene SPC110, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC110YDR356W TY1A-BLQ12266 440 aa1.4□□□□□ -2.18
SPC110YDR356W ORT1Q12375 292 aa1.4□□□□□ -2.18
SPC110YDR356W NUP192P47054 1683 aa1.4□□□□□ -2.19
SPC110YDR356W YBR085C-AO43137 85 aa1.4□□□□□ -2.19
SPC110YDR356W CDC7P06243 507 aa1.4□□□□□ -2.19
SPC110YDR356W COR1P07256 457 aa1.4□□□□□ -2.19
SPC110YDR356W GCR1P07261 785 aa1.4□□□□□ -2.19
SPC110YDR356W PUT2P07275 575 aa1.4□□□□□ -2.19
SPC110YDR356W BCY1P07278 416 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W ATP5P09457 212 aa1.4□□□□□ -2.19
SPC110YDR356W ASP3-2P0CX77 362 aa1.4□□□□□ -2.19
SPC110YDR356W ASP3-3P0CX78 362 aa1.4□□□□□ -2.19
SPC110YDR356W ASP3-4P0CX79 362 aa1.4□□□□□ -2.19
SPC110YDR356W ASP3-1P0CZ17 362 aa1.4□□□□□ -2.19
SPC110YDR356W GAL3P13045 520 aa1.4□□□□□ -2.19
SPC110YDR356W DPM1P14020 267 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W CKI1P20485 582 aa1.4□□□□□ -2.19
SPC110YDR356W MGR1P25573 417 aa1.4□□□□□ -2.19
SPC110YDR356W URK1P27515 501 aa1.4□□□□□ -2.19
SPC110YDR356W ERV1P27882 189 aa1.4□□□□□ -2.19
SPC110YDR356W DEG1P31115 442 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W ATS1P31386 333 aa1.4□□□□□ -2.19
SPC110YDR356W MRP49P32388 137 aa1.4□□□□□ -2.19
SPC110YDR356W HOG1P32485 435 aa1.4□□□□□ -2.19
SPC110YDR356W CDC5P32562 705 aa1.4□□□□□ -2.19
SPC110YDR356W ECT1P33412 323 aa1.4□□□□□ -2.19
SPC110YDR356W VPS21P36017 210 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W TUL1P36096 758 aa1.4□□□□□ -2.19
SPC110YDR356W HEL1P36113 551 aa1.4□□□□□ -2.19
SPC110YDR356W YKR041WP36134 250 aa1.4□□□□□ -2.19
SPC110YDR356W YKR078WP36158 585 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W SOL2P37262 315 aa1.4□□□□□ -2.19
SPC110YDR356W SLM4P38247 162 aa1.4□□□□□ -2.19
SPC110YDR356W MIC12P38341 106 aa1.4□□□□□ -2.19
SPC110YDR356W MIP6P38760 659 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W SMF1P38925 575 aa1.4□□□□□ -2.19
SPC110YDR356W RBG1P39729 369 aa1.4□□□□□ -2.19
SPC110YDR356W VPS52P39904 641 aa1.4□□□□□ -2.19
SPC110YDR356W AVT2P39981 480 aa1.4□□□□□ -2.19
SPC110YDR356W YER010CP40011 234 aa1.4□□□□□ -2.19
SPC110YDR356W NTA1P40354 457 aa1.4□□□□□ -2.19
SPC110YDR356W VHS2P40463 436 aa1.4□□□□□ -2.19
SPC110YDR356W POG1P40473 351 aa1.4□□□□□ -2.19
SPC110YDR356W HXT9P40885 567 aa1.4□□□□□ -2.19
SPC110YDR356W OPT1P40897 799 aa1.4□□□□□ -2.19
SPC110YDR356W RPL10P41805 221 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W OYE3P41816 400 aaPredicted RBP1.4□□□□□ -2.19
SPC110YDR356W GDS1P41913 522 aa1.4□□□□□ -2.19
SPC110YDR356W FAR3P46671 204 aa1.4□□□□□ -2.19
SPC110YDR356W JJJ3P47138 172 aa1.4□□□□□ -2.19
SPC110YDR356W YJR141WP47172 347 aaPredicted RBP1.4□□□□□ -2.19
SPC110YDR356W CTF18P49956 741 aa1.4□□□□□ -2.19
SPC110YDR356W RPA14P50106 137 aa1.4□□□□□ -2.19
SPC110YDR356W STR3P53101 465 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W ERV14P53173 138 aa1.4□□□□□ -2.19
SPC110YDR356W YNL143CP53908 130 aa1.4□□□□□ -2.19
SPC110YDR356W HXT11P54862 567 aa1.4□□□□□ -2.19
SPC110YDR356W HHT1P61830 136 aa1.4□□□□□ -2.19
SPC110YDR356W RSM23Q01163 450 aa1.4□□□□□ -2.19
SPC110YDR356W HLR1Q04429 423 aa1.4□□□□□ -2.19
SPC110YDR356W YMR114CQ04471 368 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W RQC1Q05468 723 aaKnown RBP1.4□□□□□ -2.19
SPC110YDR356W MSC3Q05812 728 aa1.4□□□□□ -2.19
SPC110YDR356W YLR407WQ06070 228 aa1.4□□□□□ -2.19
SPC110YDR356W YPR114WQ06107 315 aa1.4□□□□□ -2.19
SPC110YDR356W TPO1Q07824 586 aa1.4□□□□□ -2.19
SPC110YDR356W GPB1Q08886 897 aa1.4□□□□□ -2.19
SPC110YDR356W FEX1Q08913 375 aa1.4□□□□□ -2.19
SPC110YDR356W RTK1Q12100 620 aaPredicted RBP1.4□□□□□ -2.19
SPC110YDR356W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.4□□□□□ -2.19not detected
SPC110YDR356W TPO4Q12256 659 aa1.4□□□□□ -2.19
SPC110YDR356W SFM1Q12314 213 aa1.4□□□□□ -2.19
SPC110YDR356W SFG1Q12507 346 aa1.4□□□□□ -2.19
SPC110YDR356W YLR099W-AQ3E798 87 aa1.4□□□□□ -2.19
SPC110YDR356W MF(ALPHA)1P01149 165 aa1.39□□□□□ -2.19
SPC110YDR356W ADE4P04046 510 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W RAD52P06778 471 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W PHO2P07269 559 aa1.39□□□□□ -2.19
SPC110YDR356W RIP1P08067 215 aa1.39□□□□□ -2.19
SPC110YDR356W RPB5P20434 215 aa1.39□□□□□ -2.19
SPC110YDR356W EPT1P22140 391 aa1.39□□□□□ -2.19
SPC110YDR356W MEK1P24719 497 aaPredicted RBP1.39□□□□□ -2.19
SPC110YDR356W SCJ1P25303 377 aa1.39□□□□□ -2.19
SPC110YDR356W LSB5P25369 354 aa1.39□□□□□ -2.19
SPC110YDR356W RSA4P25382 515 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W PEX34P25584 144 aa1.39□□□□□ -2.19
SPC110YDR356W YIH1P25637 258 aa1.39□□□□□ -2.19
SPC110YDR356W PDC6P26263 563 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W POP5P28005 173 aa1.39□□□□□ -2.19
SPC110YDR356W ERG3P32353 365 aa1.39□□□□□ -2.19
SPC110YDR356W SPT14P32363 452 aa1.39□□□□□ -2.19
SPC110YDR356W APE2P32454 952 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W PTM1P32857 523 aa1.39□□□□□ -2.19
SPC110YDR356W TAF14P35189 244 aa1.39□□□□□ -2.19
SPC110YDR356W SRY1P36007 326 aa1.39□□□□□ -2.19
SPC110YDR356W OAF3P36023 863 aa1.39□□□□□ -2.19
SPC110YDR356W TCD2P36101 447 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W PET10P36139 283 aa1.39□□□□□ -2.19
SPC110YDR356W RPF2P36160 344 aaKnown RBP1.39□□□□□ -2.19
SPC110YDR356W LDB7P38210 180 aa1.39□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 31.3 ms