RNA–Protein interactions for RNA: YDR227W

SIR4, Transcript of SIR protein involved in assembly of silent chromatin domains, yeastyeast

Gene SIR4, Length 4,077 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIR4YDR227W YMR31P19955 123 aa1.91□□□□□ -2.1
SIR4YDR227W CDC20P26309 610 aa1.91□□□□□ -2.1
SIR4YDR227W MOT1P32333 1867 aa1.91□□□□□ -2.1
SIR4YDR227W SSO1P32867 290 aa1.91□□□□□ -2.1
SIR4YDR227W CPR5P35176 225 aa1.91□□□□□ -2.1
SIR4YDR227W DOA1P36037 715 aa1.91□□□□□ -2.1
SIR4YDR227W VPS51P36116 164 aa1.91□□□□□ -2.1
SIR4YDR227W RFC5P38251 354 aa1.91□□□□□ -2.1
SIR4YDR227W PFS1P38872 237 aa1.91□□□□□ -2.1
SIR4YDR227W CYC2P38909 366 aa1.91□□□□□ -2.1
SIR4YDR227W BEM4P39011 633 aa1.91□□□□□ -2.1
SIR4YDR227W IDP2P41939 412 aa1.91□□□□□ -2.1
SIR4YDR227W PMT4P46971 762 aa1.91□□□□□ -2.1
SIR4YDR227W ASN2P49090 572 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W IMA1P53051 589 aa1.91□□□□□ -2.1
SIR4YDR227W HCH1P53834 153 aa1.91□□□□□ -2.1
SIR4YDR227W EBS1Q03466 884 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W YDR248CQ03786 193 aa1.91□□□□□ -2.1
SIR4YDR227W ARC18Q05933 178 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W ASA1Q06822 443 aa1.91□□□□□ -2.1
SIR4YDR227W YOL075CQ08234 1294 aa1.91□□□□□ -2.1
SIR4YDR227W ESA1Q08649 445 aa1.91□□□□□ -2.1
SIR4YDR227W DCP1Q12517 231 aaPredicted RBP1.91□□□□□ -2.1
SIR4YDR227W TDH3P00359 332 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SIR4YDR227W RPL31BP0C2H9 113 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W VPS33P20795 691 aa1.91□□□□□ -2.1
SIR4YDR227W MRPL9P31334 269 aa1.91□□□□□ -2.1
SIR4YDR227W MOH1P38191 138 aa1.91□□□□□ -2.1
SIR4YDR227W ECM13P38195 257 aa1.91□□□□□ -2.1
SIR4YDR227W EXO1P39875 702 aa1.91□□□□□ -2.1
SIR4YDR227W HEM14P40012 539 aa1.91□□□□□ -2.1
SIR4YDR227W UTP25P40498 721 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W DFG10P40526 253 aa1.91□□□□□ -2.1
SIR4YDR227W MND2P40577 368 aa1.91□□□□□ -2.1
SIR4YDR227W MAD2P40958 196 aa1.91□□□□□ -2.1
SIR4YDR227W FMP32P43557 207 aa1.91□□□□□ -2.1
SIR4YDR227W YJR012CP47087 207 aa1.91□□□□□ -2.1
SIR4YDR227W VPS73P53142 486 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W CTK1Q03957 528 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W KRE28Q04431 385 aa1.91□□□□□ -2.1
SIR4YDR227W MSH5Q12175 901 aa1.91□□□□□ -2.1
SIR4YDR227W YLL056CQ12177 298 aa1.91□□□□□ -2.1
SIR4YDR227W PUF2Q12221 1075 aaKnown RBP RIP-Chip data1.91□□□□□ -2.1not detected
SIR4YDR227W NOT5Q12514 560 aaPredicted RBP1.91□□□□□ -2.1
SIR4YDR227W PRP8P33334 2413 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W QCR6P00127 147 aa1.91□□□□□ -2.1
SIR4YDR227W MET2P08465 486 aa1.91□□□□□ -2.1
SIR4YDR227W YEF1P32622 495 aa1.91□□□□□ -2.1
SIR4YDR227W AME1P38313 324 aa1.91□□□□□ -2.1
SIR4YDR227W RRP3P38712 501 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W FMC1P40491 155 aa1.91□□□□□ -2.1
SIR4YDR227W TAX4P47030 604 aa1.91□□□□□ -2.1
SIR4YDR227W HMS2P47175 358 aa1.91□□□□□ -2.1
SIR4YDR227W SEH1P53011 349 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W CPD1P53314 239 aa1.91□□□□□ -2.1
SIR4YDR227W YIP3P53633 176 aa1.91□□□□□ -2.1
SIR4YDR227W YMR087WQ04299 284 aa1.91□□□□□ -2.1
SIR4YDR227W YML096WQ04489 525 aa1.91□□□□□ -2.1
SIR4YDR227W CSM3Q04659 317 aa1.91□□□□□ -2.1
SIR4YDR227W ULA1Q12059 462 aa1.91□□□□□ -2.1
SIR4YDR227W CAR1P00812 333 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W COQ2P32378 372 aa1.91□□□□□ -2.1
SIR4YDR227W CRG1P38892 291 aaRIP-Chip data1.91□□□□□ -2.1not detected
SIR4YDR227W CFD1P40558 293 aa1.91□□□□□ -2.1
SIR4YDR227W ECM27P47144 725 aa1.91□□□□□ -2.1
SIR4YDR227W JHD2P47156 728 aaPredicted RBP1.91□□□□□ -2.1
SIR4YDR227W USE1P53146 245 aa1.91□□□□□ -2.1
SIR4YDR227W PCP1P53259 346 aa1.91□□□□□ -2.1
SIR4YDR227W RTT103Q05543 409 aa1.91□□□□□ -2.1
SIR4YDR227W YOL029CQ08187 201 aa1.91□□□□□ -2.1
SIR4YDR227W YOR342CQ12182 319 aa1.91□□□□□ -2.1
SIR4YDR227W TPT1Q12272 230 aaKnown RBP1.91□□□□□ -2.1
SIR4YDR227W RRP42Q12277 265 aaPredicted RBP1.91□□□□□ -2.1
SIR4YDR227W PRP46Q12417 451 aaPredicted RBP1.91□□□□□ -2.1
SIR4YDR227W YDR157WA0A023PZE8 133 aa1.9□□□□□ -2.1
SIR4YDR227W ATP10P18496 279 aa1.9□□□□□ -2.1
SIR4YDR227W ACO1P19414 778 aaKnown RBP RIP-Chip data1.9□□□□□ -2.1not detected
SIR4YDR227W YAP1P19880 650 aaKnown RBP1.9□□□□□ -2.1
SIR4YDR227W YCR015CP25616 317 aa1.9□□□□□ -2.1
SIR4YDR227W YSC84P32793 468 aa1.9□□□□□ -2.1
SIR4YDR227W CAF4P36130 643 aa1.9□□□□□ -2.1
SIR4YDR227W CCT2P39076 527 aaKnown RBP1.9□□□□□ -2.1
SIR4YDR227W SAP1P39955 897 aaKnown RBP1.9□□□□□ -2.1
SIR4YDR227W MRPS17Q03246 237 aaPredicted RBP1.9□□□□□ -2.1
SIR4YDR227W MZM1Q03429 123 aaPredicted RBP1.9□□□□□ -2.1
SIR4YDR227W CRD1Q07560 283 aa1.9□□□□□ -2.1
SIR4YDR227W GSH2Q08220 491 aa1.9□□□□□ -2.1
SIR4YDR227W RAX2Q12465 1220 aa1.9□□□□□ -2.1
SIR4YDR227W SFG1Q12507 346 aa1.9□□□□□ -2.1
SIR4YDR227W IGO2Q9P305 131 aa1.9□□□□□ -2.1
SIR4YDR227W YKR104WP0CE69 306 aa1.9□□□□□ -2.11
SIR4YDR227W MEK1P24719 497 aaPredicted RBP1.9□□□□□ -2.11
SIR4YDR227W RBK1P25332 333 aa1.9□□□□□ -2.11
SIR4YDR227W RSA4P25382 515 aaKnown RBP1.9□□□□□ -2.11
SIR4YDR227W FRM2P37261 193 aa1.9□□□□□ -2.11
SIR4YDR227W RFX1P48743 811 aa1.9□□□□□ -2.11
SIR4YDR227W ALG13P53178 202 aa1.9□□□□□ -2.11
SIR4YDR227W BOP3P53958 396 aa1.9□□□□□ -2.11
SIR4YDR227W RRG8Q06109 277 aa1.9□□□□□ -2.11
SIR4YDR227W YFH1Q07540 174 aa1.9□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 150.1 ms