RNA–Protein interactions for RNA: YDR087C

RRP1, Transcript of Essential evolutionarily conserved nucleolar protein, yeast

Gene RRP1, Length 837 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RRP1	YDR087C	VHS1	Q03785	461 aa		4.26	□□□□□ -1.73
RRP1	YDR087C	FAR10	Q06001	478 aa		4.26	□□□□□ -1.73
RRP1	YDR087C	RTC5	Q12108	567 aa	Known RBP	4.26	□□□□□ -1.73
RRP1	YDR087C	TPI1	P00942	248 aa	Known RBP	4.25	□□□□□ -1.73
RRP1	YDR087C	YPS1	P32329	569 aa		4.25	□□□□□ -1.73
RRP1	YDR087C	PCH2	P38126	564 aa		4.25	□□□□□ -1.73
RRP1	YDR087C	YDR089W	P38966	869 aa		4.25	□□□□□ -1.73
RRP1	YDR087C	YDL012C	Q12489	107 aa		4.25	□□□□□ -1.73
RRP1	YDR087C	BNI1	P41832	1953 aa		4.24	□□□□□ -1.73
RRP1	YDR087C	STF1	P01098	86 aa		4.24	□□□□□ -1.73
RRP1	YDR087C	CBP2	P03874	630 aa	Predicted RBP	4.24	□□□□□ -1.73
RRP1	YDR087C	MID2	P36027	376 aa		4.24	□□□□□ -1.73
RRP1	YDR087C	SSO2	P39926	295 aa		4.24	□□□□□ -1.73
RRP1	YDR087C	TPC1	P53257	314 aa		4.24	□□□□□ -1.73
RRP1	YDR087C	HIR3	P47171	1648 aa		4.24	□□□□□ -1.73
RRP1	YDR087C	TAF2	P23255	1407 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	REP1	P03871	373 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	YKL162C	P36052	402 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	MRPS9	P38120	278 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	PES4	P39684	611 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	YFL040W	P43562	540 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	RVB1	Q03940	463 aa	Known RBP	4.23	□□□□□ -1.73
RRP1	YDR087C	BUR2	Q05949	395 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	TIR4	Q12218	487 aa	Predicted RBP	4.23	□□□□□ -1.73
RRP1	YDR087C	LDB17	Q12342	491 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	YBL111C	Q3E7Y5	667 aa		4.23	□□□□□ -1.73
RRP1	YDR087C	YCF1	P39109	1515 aa	Known RBP	4.22	□□□□□ -1.73
RRP1	YDR087C	ASP3-2	P0CX77	362 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	ASP3-3	P0CX78	362 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	ASP3-4	P0CX79	362 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	ASP3-1	P0CZ17	362 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	MSS116	P15424	664 aa	Known RBP	4.22	□□□□□ -1.73
RRP1	YDR087C	PET18	P25362	215 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	URA10	P30402	227 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	VMA5	P31412	392 aa	Known RBP	4.22	□□□□□ -1.73
RRP1	YDR087C	CAB5	Q03941	241 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	CUR1	Q06469	252 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	RPN8	Q08723	338 aa	Known RBP	4.22	□□□□□ -1.73
RRP1	YDR087C	PAA1	Q12447	191 aa	Known RBP	4.22	□□□□□ -1.73
RRP1	YDR087C	RAX2	Q12465	1220 aa		4.22	□□□□□ -1.73
RRP1	YDR087C	PUT4	P15380	627 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	DTR1	P38125	572 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	SWC5	P38326	303 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	INA22	P40576	216 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	VEL1	P53058	206 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	YGR168C	P53293	376 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	MCH1	Q07376	486 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	YDR018C	Q12185	396 aa		4.21	□□□□□ -1.74
RRP1	YDR087C	MYO2	P19524	1574 aa	Known RBP	4.21	□□□□□ -1.74
RRP1	YDR087C	BGL2	P15703	313 aa	Known RBP	4.2	□□□□□ -1.74
RRP1	YDR087C	EPT1	P22140	391 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	RBK1	P25332	333 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	ACB1	P31787	87 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	DED81	P38707	554 aa	Known RBP	4.2	□□□□□ -1.74
RRP1	YDR087C	RRT13	P40042	185 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	YFR018C	P43599	363 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	DBP6	P53734	629 aa	Known RBP	4.2	□□□□□ -1.74
RRP1	YDR087C	HCH1	P53834	153 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	SED5	Q01590	340 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	API2	Q04413	109 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	RDL2	Q08742	149 aa	Known RBP	4.2	□□□□□ -1.74
RRP1	YDR087C	MMT2	Q08970	484 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	YPQ1	Q12010	308 aa		4.2	□□□□□ -1.74
RRP1	YDR087C	SPS100	P13130	326 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	BUD2	P33314	1104 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	TIP20	P33891	701 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	RCK1	P38622	512 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	GGC1	P38988	300 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	END3	P39013	349 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	FHL1	P39521	936 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	UTP25	P40498	721 aa	Known RBP	4.19	□□□□□ -1.74
RRP1	YDR087C	RIB4	P50861	169 aa	Predicted RBP	4.19	□□□□□ -1.74
RRP1	YDR087C	YLR297W	Q05899	129 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	YLR012C	Q07927	99 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	MDY2	Q12285	212 aa		4.19	□□□□□ -1.74
RRP1	YDR087C	SPS19	P32573	292 aa	Known RBP	4.18	□□□□□ -1.74
RRP1	YDR087C	FET3	P38993	636 aa		4.18	□□□□□ -1.74
RRP1	YDR087C	LOC1	P43586	204 aa	Predicted RBP	4.18	□□□□□ -1.74
RRP1	YDR087C	PMT4	P46971	762 aa		4.18	□□□□□ -1.74
RRP1	YDR087C	LTE1	P07866	1435 aa		4.18	□□□□□ -1.74
RRP1	YDR087C	IRC20	Q06554	1556 aa		4.18	□□□□□ -1.74
RRP1	YDR087C	RPA190	P10964	1664 aa	Known RBP	4.17	□□□□□ -1.74
RRP1	YDR087C	CBF5	P33322	483 aa	Known RBP RIP-Chip data	4.17	□□□□□ -1.74	not detected
RRP1	YDR087C	YKL071W	P36086	256 aa		4.17	□□□□□ -1.74
RRP1	YDR087C	TAE1	P38340	232 aa		4.17	□□□□□ -1.74
RRP1	YDR087C	MNN9	P39107	395 aa	Known RBP	4.17	□□□□□ -1.74
RRP1	YDR087C	CDC40	P40968	455 aa	Predicted RBP	4.17	□□□□□ -1.74
RRP1	YDR087C	MIM1	Q08176	113 aa		4.17	□□□□□ -1.74
RRP1	YDR087C	YAL067W-A	Q8TGK6	75 aa		4.17	□□□□□ -1.74
RRP1	YDR087C	CDC25	P04821	1589 aa		4.17	□□□□□ -1.74
RRP1	YDR087C	GCD2	P12754	651 aa	Predicted RBP	4.16	□□□□□ -1.74
RRP1	YDR087C	DBP7	P36120	742 aa	Known RBP	4.16	□□□□□ -1.74
RRP1	YDR087C	ECM34	P38728	170 aa		4.16	□□□□□ -1.74
RRP1	YDR087C	OKP1	P53298	406 aa		4.16	□□□□□ -1.74
RRP1	YDR087C	UBX2	Q04228	584 aa		4.16	□□□□□ -1.74
RRP1	YDR087C	YMR111C	Q04461	462 aa	Predicted RBP	4.16	□□□□□ -1.74
RRP1	YDR087C	MRX9	Q07349	420 aa	Known RBP	4.16	□□□□□ -1.74
RRP1	YDR087C	APC2	Q12440	853 aa		4.16	□□□□□ -1.74
RRP1	YDR087C	DNF1	P32660	1571 aa		4.15	□□□□□ -1.74
RRP1	YDR087C	MMS1	Q06211	1407 aa		4.15	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 193.5 ms