RNA–Protein interactions for RNA: YDR080W

VPS41, Transcript of Subunit of the HOPS endocytic tethering complex, yeastyeast

Gene VPS41, Length 2,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS41YDR080W MRPL10P36520 322 aa2.24□□□□□ -2.05
VPS41YDR080W CCT4P39078 528 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W IES5P40060 125 aa2.24□□□□□ -2.05
VPS41YDR080W YFL012WP43580 148 aa2.24□□□□□ -2.05
VPS41YDR080W IRC15Q02733 499 aa2.24□□□□□ -2.05
VPS41YDR080W ERB1Q04660 807 aaKnown RBP2.24□□□□□ -2.05
VPS41YDR080W YMR310CQ04867 317 aaPredicted RBP2.24□□□□□ -2.05
VPS41YDR080W SKS1Q12505 502 aa2.24□□□□□ -2.05
VPS41YDR080W CCW14O13547 238 aa2.23□□□□□ -2.05
VPS41YDR080W MRS3P10566 314 aa2.23□□□□□ -2.05
VPS41YDR080W AAC3P18238 307 aa2.23□□□□□ -2.05
VPS41YDR080W RPB5P20434 215 aa2.23□□□□□ -2.05
VPS41YDR080W UTR1P21373 530 aa2.23□□□□□ -2.05
VPS41YDR080W PTM1P32857 523 aa2.23□□□□□ -2.05
VPS41YDR080W VPS21P36017 210 aaKnown RBP2.23□□□□□ -2.05
VPS41YDR080W YOR062CP36025 268 aa2.23□□□□□ -2.05
VPS41YDR080W MRPL39P36533 70 aa2.23□□□□□ -2.05
VPS41YDR080W PTH1P38876 190 aaKnown RBP2.23□□□□□ -2.05
VPS41YDR080W GAT2P40209 560 aa2.23□□□□□ -2.05
VPS41YDR080W GCD10P41814 478 aa2.23□□□□□ -2.05
VPS41YDR080W NAS6P50086 228 aa2.23□□□□□ -2.05
VPS41YDR080W MRPL19P53875 158 aa2.23□□□□□ -2.05
VPS41YDR080W UBX4P54730 416 aa2.23□□□□□ -2.05
VPS41YDR080W FMP42Q04991 504 aa2.23□□□□□ -2.05
VPS41YDR080W RTT103Q05543 409 aa2.23□□□□□ -2.05
VPS41YDR080W YPR064WQ12492 139 aa2.23□□□□□ -2.05
VPS41YDR080W YCR090CP25654 182 aaKnown RBP2.23□□□□□ -2.05
VPS41YDR080W SPO23P33757 523 aa2.23□□□□□ -2.05
VPS41YDR080W YHL044WP38727 235 aa2.23□□□□□ -2.05
VPS41YDR080W SEC31P38968 1273 aaKnown RBP2.23□□□□□ -2.05
VPS41YDR080W ABM1P47146 123 aa2.23□□□□□ -2.05
VPS41YDR080W TIM10P87108 93 aa2.23□□□□□ -2.05
VPS41YDR080W HPT1Q04178 221 aaKnown RBP2.23□□□□□ -2.05
VPS41YDR080W TAF11Q04226 346 aa2.23□□□□□ -2.05
VPS41YDR080W YLR036CQ07986 203 aa2.23□□□□□ -2.05
VPS41YDR080W MDY2Q12285 212 aa2.23□□□□□ -2.05
VPS41YDR080W REP1P03871 373 aa2.22□□□□□ -2.05
VPS41YDR080W RPL20AP0CX23 172 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W RPL20BP0CX24 172 aaPredicted RBP2.22□□□□□ -2.05
VPS41YDR080W RPS8AP0CX39 200 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W RPS8BP0CX40 200 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W PDX1P16451 410 aa2.22□□□□□ -2.05
VPS41YDR080W SGV1P23293 657 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W GPI12P23797 304 aa2.22□□□□□ -2.05
VPS41YDR080W RPB9P27999 122 aa2.22□□□□□ -2.05
VPS41YDR080W SAC1P32368 623 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W GCG1P32656 232 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W COX13P32799 129 aa2.22□□□□□ -2.05
VPS41YDR080W RPT5P33297 434 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W YCR087C-AP37263 153 aa2.22□□□□□ -2.05
VPS41YDR080W FES1P38260 290 aa2.22□□□□□ -2.05
VPS41YDR080W KRE9P39005 276 aa2.22□□□□□ -2.05
VPS41YDR080W RPS12P48589 143 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W UTP6Q02354 440 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W SDC1Q03323 175 aa2.22□□□□□ -2.05
VPS41YDR080W MIX14Q04341 121 aa2.22□□□□□ -2.05
VPS41YDR080W SEI1Q06058 285 aa2.22□□□□□ -2.05
VPS41YDR080W RRG7Q08774 242 aaPredicted RBP2.22□□□□□ -2.05
VPS41YDR080W MHT1Q12525 324 aa2.22□□□□□ -2.05
VPS41YDR080W YPR096CO13587 100 aa2.22□□□□□ -2.05
VPS41YDR080W MGT1P26188 188 aa2.22□□□□□ -2.05
VPS41YDR080W YER188WP40103 239 aa2.22□□□□□ -2.05
VPS41YDR080W YIL012WP40551 113 aa2.22□□□□□ -2.05
VPS41YDR080W STE24P47154 453 aa2.22□□□□□ -2.05
VPS41YDR080W SBH2P52871 88 aa2.22□□□□□ -2.05
VPS41YDR080W RCF2P53721 224 aa2.22□□□□□ -2.05
VPS41YDR080W YNL140CP53910 189 aa2.22□□□□□ -2.05
VPS41YDR080W LAP3Q01532 483 aaKnown RBP RIP-Chip data2.22□□□□□ -2.05not detected
VPS41YDR080W PRM15Q03262 622 aa2.22□□□□□ -2.05
VPS41YDR080W TAF12Q03761 539 aa2.22□□□□□ -2.05
VPS41YDR080W ECM11Q04110 302 aa2.22□□□□□ -2.05
VPS41YDR080W MDN1Q12019 4910 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W CAR1P00812 333 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W GPH1P06738 902 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W PTR2P32901 601 aa2.22□□□□□ -2.05
VPS41YDR080W SDH3P33421 198 aa2.22□□□□□ -2.05
VPS41YDR080W CBP4P37267 147 aa2.22□□□□□ -2.05
VPS41YDR080W RKM3P38222 552 aa2.22□□□□□ -2.05
VPS41YDR080W COA1P40452 197 aa2.22□□□□□ -2.05
VPS41YDR080W AZF1P41696 914 aa2.22□□□□□ -2.05
VPS41YDR080W MIC19P43594 170 aa2.22□□□□□ -2.05
VPS41YDR080W TOM22P49334 152 aa2.22□□□□□ -2.05
VPS41YDR080W EFM5P53200 248 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W GOR1P53839 350 aa2.22□□□□□ -2.05
VPS41YDR080W RHO4Q00246 291 aa2.22□□□□□ -2.05
VPS41YDR080W YPL107WQ02873 248 aa2.22□□□□□ -2.05
VPS41YDR080W YML131WQ03102 365 aa2.22□□□□□ -2.05
VPS41YDR080W YMR114CQ04471 368 aaKnown RBP2.22□□□□□ -2.05
VPS41YDR080W UTP21Q06078 939 aaPredicted RBP2.22□□□□□ -2.05
VPS41YDR080W FDH1Q08911 376 aa2.22□□□□□ -2.05
VPS41YDR080W RAP1P11938 827 aa2.21□□□□□ -2.06
VPS41YDR080W KSS1P14681 368 aa2.21□□□□□ -2.06
VPS41YDR080W RPS2P25443 254 aaKnown RBP2.21□□□□□ -2.06
VPS41YDR080W EHD3P28817 500 aa2.21□□□□□ -2.06
VPS41YDR080W NUP120P35729 1037 aa2.21□□□□□ -2.06
VPS41YDR080W YPK3P38070 525 aa2.21□□□□□ -2.06
VPS41YDR080W YER010CP40011 234 aa2.21□□□□□ -2.06
VPS41YDR080W RTS2P40962 232 aa2.21□□□□□ -2.06
VPS41YDR080W CWC22P53333 577 aaKnown RBP2.21□□□□□ -2.06
VPS41YDR080W OGG1P53397 376 aaPredicted RBP2.21□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms