RNA–Protein interactions for RNA: YDR054C

CDC34, Transcript of Ubiquitin-conjugating enzyme (E2), yeast

Gene CDC34, Length 888 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDC34	YDR054C	TOM22	P49334	152 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	CDH1	P53197	566 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	YGR079W	P53249	370 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	RHO5	P53879	331 aa	Known RBP	5.7	□□□□□ -1.5
CDC34	YDR054C	RHO4	Q00246	291 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	NRG1	Q03125	231 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	BNA5	Q05979	453 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	PUS9	Q12069	462 aa		5.7	□□□□□ -1.5
CDC34	YDR054C	MF(ALPHA)1	P01149	165 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	COR1	P07256	457 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	FBA1	P14540	359 aa	Known RBP	5.69	□□□□□ -1.5
CDC34	YDR054C	PRP2	P20095	876 aa	Predicted RBP	5.69	□□□□□ -1.5
CDC34	YDR054C	MSB1	P21339	1137 aa	Known RBP	5.69	□□□□□ -1.5
CDC34	YDR054C	CTR86	P25355	563 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	TAH1	P25638	111 aa	Predicted RBP	5.69	□□□□□ -1.5
CDC34	YDR054C	YCR061W	P25639	631 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	YUH1	P35127	236 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	TUL1	P36096	758 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	SCO2	P38072	301 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	ZTA1	P38230	334 aa	Known RBP	5.69	□□□□□ -1.5
CDC34	YDR054C	PTC7	P38797	343 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	MSS4	P38994	779 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	YRB2	P40517	327 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	STE24	P47154	453 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	IBA57	P47158	497 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	MRPL1	Q04599	285 aa		5.69	□□□□□ -1.5
CDC34	YDR054C	PUT2	P07275	575 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	TAL1	P15019	335 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	PDA1	P16387	420 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	SAC1	P32368	623 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	CYS4	P32582	507 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	SEC66	P33754	206 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	WBP1	P33767	430 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	DOA1	P36037	715 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	GET2	P40056	285 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	PDS1	P40316	373 aa	Predicted RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	YIL077C	P40508	320 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	URM1	P40554	99 aa	Predicted RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	VMA10	P48836	114 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	SED5	Q01590	340 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	YMR099C	Q03161	297 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	RSM28	Q03430	361 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	YMR226C	Q05016	267 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	SPO77	Q06134	477 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	IRC13	Q08630	104 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	VIK1	Q12045	647 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	BSC1	Q12140	328 aa		5.68	□□□□□ -1.5
CDC34	YDR054C	LEU9	Q12166	604 aa	Known RBP	5.68	□□□□□ -1.5
CDC34	YDR054C	GCD1	P09032	578 aa	Predicted RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	YML003W	P0CF16	290 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	ZWF1	P11412	505 aa	Known RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	CBS2	P14905	389 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	URE2	P23202	354 aa	Known RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	RPS1B	P23248	255 aa	Known RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	BUD5	P25300	642 aa	Predicted RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	MXR2	P25566	168 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	APE2	P32454	952 aa	Known RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	OAR1	P35731	278 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	THI2	P38141	450 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	YBR285W	P38354	144 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	LNP1	P38878	278 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	PEX7	P39108	375 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	FMP52	P40008	231 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	THO1	P40040	218 aa	Known RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	RIO2	P40160	425 aa	Known RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	SYF2	P53277	215 aa	Predicted RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	YGR266W	P53326	701 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	YMR310C	Q04867	317 aa	Predicted RBP	5.67	□□□□□ -1.5
CDC34	YDR054C	NDL1	Q06568	189 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	RRT8	Q08219	342 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	FRE5	Q08908	694 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	RSA1	Q08932	381 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	YPL272C	Q08984	517 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	YLR126C	Q12288	251 aa		5.67	□□□□□ -1.5
CDC34	YDR054C	AI1	P03875	834 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	YCR006C	P25350	157 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	RAD51	P25454	400 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	AFG1	P32317	509 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	YMC1	P32331	307 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	PTR2	P32901	601 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	TIF3	P34167	436 aa	Known RBP	5.66	□□□□□ -1.5
CDC34	YDR054C	COG3	P40094	801 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	HOC1	P47124	396 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	YGR149W	P48236	432 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	IMD4	P50094	524 aa	Known RBP	5.66	□□□□□ -1.5
CDC34	YDR054C	TEX1	P53851	422 aa	Known RBP	5.66	□□□□□ -1.5
CDC34	YDR054C	RSC9	Q03124	581 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	FIN1	Q03898	291 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	ARV1	Q06541	321 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	ARR3	Q06598	404 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	RLM1	Q12224	676 aa		5.66	□□□□□ -1.5
CDC34	YDR054C	SIR3	P06701	978 aa		5.65	□□□□□ -1.5
CDC34	YDR054C	GPH1	P06738	902 aa	Known RBP	5.65	□□□□□ -1.5
CDC34	YDR054C	FEN2	P25621	512 aa	Known RBP	5.65	□□□□□ -1.5
CDC34	YDR054C	IMG1	P25626	169 aa		5.65	□□□□□ -1.5
CDC34	YDR054C	MRPL6	P32904	214 aa		5.65	□□□□□ -1.5
CDC34	YDR054C	ECM8	P38246	354 aa		5.65	□□□□□ -1.5
CDC34	YDR054C	NTC20	P38302	140 aa	Predicted RBP	5.65	□□□□□ -1.5
CDC34	YDR054C	TDA11	P38854	504 aa		5.65	□□□□□ -1.5
CDC34	YDR054C	PIG2	P40187	538 aa		5.65	□□□□□ -1.5

Retrieved 100 of 5,963 RNA–protein pairs in 26.1 ms