RNA–Protein interactions for RNA: YDL165W

CDC36, Transcript of Component of the CCR4-NOT core complex, yeastyeast

Gene CDC36, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC36YDL165W DAL81P21657 970 aa1.24□□□□□ -2.21
CDC36YDL165W APA2P22108 325 aa1.24□□□□□ -2.21
CDC36YDL165W HXT2P23585 541 aa1.24□□□□□ -2.21
CDC36YDL165W CSM1P25651 190 aa1.24□□□□□ -2.21
CDC36YDL165W PHO91P27514 894 aa1.24□□□□□ -2.21
CDC36YDL165W POT1P27796 417 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
CDC36YDL165W PEX3P28795 441 aa1.24□□□□□ -2.21
CDC36YDL165W SPT14P32363 452 aa1.24□□□□□ -2.21
CDC36YDL165W TFC1P32367 649 aa1.24□□□□□ -2.21
CDC36YDL165W COT1P32798 439 aa1.24□□□□□ -2.21
CDC36YDL165W GSP1P32835 219 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W GSP2P32836 220 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W RPT5P33297 434 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W RPS1AP33442 255 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W SPO23P33757 523 aa1.24□□□□□ -2.21
CDC36YDL165W SRB2P34162 210 aa1.24□□□□□ -2.21
CDC36YDL165W TAF14P35189 244 aa1.24□□□□□ -2.21
CDC36YDL165W JEN1P36035 616 aa1.24□□□□□ -2.21
CDC36YDL165W STB6P36085 766 aa1.24□□□□□ -2.21
CDC36YDL165W SKG1P36169 355 aa1.24□□□□□ -2.21
CDC36YDL165W ETR1P38071 380 aa1.24□□□□□ -2.21
CDC36YDL165W ARA1P38115 344 aa1.24□□□□□ -2.21
CDC36YDL165W PCH2P38126 564 aa1.24□□□□□ -2.21
CDC36YDL165W RIB5P38145 238 aa1.24□□□□□ -2.21
CDC36YDL165W RFT1P38206 574 aaPredicted RBP1.24□□□□□ -2.21
CDC36YDL165W FIG1P38224 298 aa1.24□□□□□ -2.21
CDC36YDL165W AME1P38313 324 aa1.24□□□□□ -2.21
CDC36YDL165W SHG1P38337 142 aa1.24□□□□□ -2.21
CDC36YDL165W TSC10P38342 320 aa1.24□□□□□ -2.21
CDC36YDL165W COS8P38723 381 aa1.24□□□□□ -2.21
CDC36YDL165W NVJ1P38881 321 aa1.24□□□□□ -2.21
CDC36YDL165W AIM18P38884 321 aa1.24□□□□□ -2.21
CDC36YDL165W MNN9P39107 395 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W NPT1P39683 429 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W YER085CP40058 173 aa1.24□□□□□ -2.21
CDC36YDL165W OSW5P40219 148 aa1.24□□□□□ -2.21
CDC36YDL165W FMC1P40491 155 aa1.24□□□□□ -2.21
CDC36YDL165W NAS2P40555 220 aa1.24□□□□□ -2.21
CDC36YDL165W OTU1P43558 301 aa1.24□□□□□ -2.21
CDC36YDL165W YFR018CP43599 363 aa1.24□□□□□ -2.21
CDC36YDL165W FMP33P46998 180 aa1.24□□□□□ -2.21
CDC36YDL165W YJL016WP47072 561 aa1.24□□□□□ -2.21
CDC36YDL165W BIR1P47134 954 aa1.24□□□□□ -2.21
CDC36YDL165W IBA57P47158 497 aa1.24□□□□□ -2.21
CDC36YDL165W YPT32P51996 222 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W SEH1P53011 349 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W TAF6P53040 516 aa1.24□□□□□ -2.21
CDC36YDL165W UFD1P53044 361 aa1.24□□□□□ -2.21
CDC36YDL165W CUE3P53137 624 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W YGR017WP53210 297 aa1.24□□□□□ -2.21
CDC36YDL165W TWF1P53250 332 aa1.24□□□□□ -2.21
CDC36YDL165W YGR127WP53275 312 aa1.24□□□□□ -2.21
CDC36YDL165W DBP6P53734 629 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W YNR062CP53748 327 aa1.24□□□□□ -2.21
CDC36YDL165W PRM1P53835 661 aa1.24□□□□□ -2.21
CDC36YDL165W VPS75P53853 264 aa1.24□□□□□ -2.21
CDC36YDL165W NOP13P53883 403 aaKnown RBP RIP-Chip data1.24□□□□□ -2.21not detected
CDC36YDL165W YCL001W-AP87012 153 aa1.24□□□□□ -2.21
CDC36YDL165W UTP6Q02354 440 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W ARL3Q02804 198 aa1.24□□□□□ -2.21
CDC36YDL165W YDC1Q02896 317 aa1.24□□□□□ -2.21
CDC36YDL165W SLD5Q03406 294 aa1.24□□□□□ -2.21
CDC36YDL165W ENT5Q03769 411 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W YDR239CQ03780 787 aa1.24□□□□□ -2.21
CDC36YDL165W YDR249CQ03787 373 aa1.24□□□□□ -2.21
CDC36YDL165W GPI17Q04080 534 aa1.24□□□□□ -2.21
CDC36YDL165W MFB1Q04922 465 aa1.24□□□□□ -2.21
CDC36YDL165W BUR2Q05949 395 aa1.24□□□□□ -2.21
CDC36YDL165W SPH1Q06160 661 aa1.24□□□□□ -2.21
CDC36YDL165W YPR147CQ06522 304 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W GPN3Q06543 272 aa1.24□□□□□ -2.21
CDC36YDL165W IMA2Q08295 589 aa1.24□□□□□ -2.21
CDC36YDL165W IES4Q08561 116 aa1.24□□□□□ -2.21
CDC36YDL165W RAX1Q08760 435 aa1.24□□□□□ -2.21
CDC36YDL165W CSM4Q08955 156 aa1.24□□□□□ -2.21
CDC36YDL165W YPL257WQ08974 193 aa1.24□□□□□ -2.21
CDC36YDL165W YLR053CQ12026 108 aa1.24□□□□□ -2.21
CDC36YDL165W SPE3Q12074 293 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W LEU9Q12166 604 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W TY3A-GQ12173 290 aa1.24□□□□□ -2.21
CDC36YDL165W RFM1Q12192 310 aa1.24□□□□□ -2.21
CDC36YDL165W RLM1Q12224 676 aa1.24□□□□□ -2.21
CDC36YDL165W VAM3Q12241 283 aa1.24□□□□□ -2.21
CDC36YDL165W RRP42Q12277 265 aaPredicted RBP1.24□□□□□ -2.21
CDC36YDL165W RKM5Q12367 367 aa1.24□□□□□ -2.21
CDC36YDL165W GIS3Q12418 502 aa1.24□□□□□ -2.21
CDC36YDL165W ATG31Q12421 196 aa1.24□□□□□ -2.21
CDC36YDL165W ISA2Q12425 185 aa1.24□□□□□ -2.21
CDC36YDL165W FRE6Q12473 712 aa1.24□□□□□ -2.21
CDC36YDL165W YHR213W-AQ8TGT4 77 aa1.24□□□□□ -2.21
CDC36YDL165W TY3A-IQ99219 290 aa1.24□□□□□ -2.21
CDC36YDL165W YPT6Q99260 215 aa1.24□□□□□ -2.21
CDC36YDL165W DDP1Q99321 188 aaKnown RBP1.24□□□□□ -2.21
CDC36YDL165W AI5_BETAQ9ZZX0 354 aa1.24□□□□□ -2.21
CDC36YDL165W TRM732Q03496 1420 aa1.23□□□□□ -2.21
CDC36YDL165W ADE6P38972 1358 aaKnown RBP1.23□□□□□ -2.21
CDC36YDL165W IRC20Q06554 1556 aa1.23□□□□□ -2.21
CDC36YDL165W QCR7P00128 127 aa1.23□□□□□ -2.21
CDC36YDL165W HTB1P02293 131 aaKnown RBP1.23□□□□□ -2.21
CDC36YDL165W HTB2P02294 131 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms