RNA–Protein interactions for RNA: YBR109C

CMD1, Transcript of Calmodulin, yeast

Gene CMD1, Length 444 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CMD1	YBR109C	ERP4	Q12450	207 aa		3.13	□□□□□ -1.91
CMD1	YBR109C	AFI1	Q99222	893 aa		3.13	□□□□□ -1.91
CMD1	YBR109C	RIB3	Q99258	208 aa		3.13	□□□□□ -1.91
CMD1	YBR109C	ECM29	P38737	1868 aa		3.13	□□□□□ -1.91
CMD1	YBR109C	RAS2	P01120	322 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	COX4	P04037	155 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	POL30	P15873	258 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	HSP26	P15992	214 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
CMD1	YBR109C	UGA1	P17649	471 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	PPH22	P23595	377 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	GRR1	P24814	1151 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	ADK2	P26364	225 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	PPZ1	P26570	692 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	CIN8	P27895	1000 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	BEM1	P29366	551 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	CRM1	P30822	1084 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	ERG1	P32476	496 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	IMP3	P32899	183 aa	Predicted RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	HCS1	P34243	683 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	PTC1	P35182	281 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	ECM15	P35195	104 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	YKL063C	P35725	167 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	MRPL17	P36528	281 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	MRPL40	P36534	297 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	SRP72	P38688	640 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	EFM1	P38732	585 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	YHR045W	P38775	560 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	YHR131C	P38835	850 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	FAD1	P38913	306 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	MET30	P39014	640 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	DHH1	P39517	506 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	SEO1	P39709	593 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	FCY21	P40039	528 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	YIL169C	P40442	995 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	BUD13	P46947	266 aa	Predicted RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	ASG7	P46993	209 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	SAM50	P53969	484 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	YPL107W	Q02873	248 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	ARX1	Q03862	593 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	YDR415C	Q04033	374 aa	Predicted RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	YMR087W	Q04299	284 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	GLO2	Q05584	274 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	YLR281C	Q05863	155 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	GPI11	Q06636	219 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	SWC7	Q06707	132 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	MFG1	Q07684	458 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	RPN8	Q08723	338 aa	Known RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	SMF3	Q12078	473 aa	Predicted RBP	3.12	□□□□□ -1.91
CMD1	YBR109C	TRM10	Q12400	293 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	ISN1	Q99312	450 aa		3.12	□□□□□ -1.91
CMD1	YBR109C	ADE4	P04046	510 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	RHO1	P06780	209 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	ATP1	P07251	545 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	DBP3	P20447	523 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	YCR007C	P25354	239 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	UBC8	P28263	218 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	ASF2	P32448	525 aa	Predicted RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	ATP11	P32453	318 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	MEI5	P32489	222 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	MRPL6	P32904	214 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	VPS17	P32913	551 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	RCN1	P36054	211 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	PIM1	P36775	1133 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	ECM13	P38195	257 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	YHL026C	P38740	315 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	YND1	P40009	630 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	RGI1	P40043	161 aa	Predicted RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	SER3	P40054	469 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	ALG8	P40351	577 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	YGR149W	P48236	432 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	PRP24	P49960	444 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	OCA1	P50946	238 aa	Predicted RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	ARO8	P53090	500 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	MRPL50	P53724	139 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	MPS1	P54199	764 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	CCE1	Q03702	353 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	TAF12	Q03761	539 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	GPI17	Q04080	534 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	APC4	Q04601	652 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	DTD1	Q07648	150 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	YLL032C	Q07834	825 aa	Known RBP RIP-Chip data	3.11	□□□□□ -1.91	not detected
CMD1	YBR109C	YLR012C	Q07927	99 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	RPN5	Q12250	445 aa	Known RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	SFM1	Q12314	213 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	YOR012W	Q12351	137 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	GTT2	Q12390	233 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	DCP1	Q12517	231 aa	Predicted RBP	3.11	□□□□□ -1.91
CMD1	YBR109C	LAG2	Q92325	660 aa		3.11	□□□□□ -1.91
CMD1	YBR109C	COX5A	P00424	153 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	SCH9	P11792	824 aa	Known RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	CAP2	P13517	287 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	CLN1	P20437	546 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	SEC62	P21825	274 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	IDP1	P21954	428 aa	Known RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	CTR86	P25355	563 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	DCC1	P25559	380 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	YIM1	P28625	365 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	AFG1	P32317	509 aa		3.1	□□□□□ -1.91
CMD1	YBR109C	VMA8	P32610	256 aa	Known RBP	3.1	□□□□□ -1.91
CMD1	YBR109C	RML2	P32611	393 aa		3.1	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms