RNA–Protein interactions for RNA: YBR029C

CDS1, Transcript of Phosphatidate cytidylyltransferase (CDP-diglyceride synthetase), yeast

Gene CDS1, Length 1,374 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CDS1	YBR029C	PRR1	P28708	518 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	ITR2	P30606	609 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	ACB1	P31787	87 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	RIB7	P33312	244 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	YNL320W	P42840	284 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	YGR210C	P42942	411 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	LOC1	P43586	204 aa	Predicted RBP	4.87	□□□□□ -1.63
CDS1	YBR029C	CTK3	P46963	296 aa	Predicted RBP	4.87	□□□□□ -1.63
CDS1	YBR029C	YMR111C	Q04461	462 aa	Predicted RBP	4.87	□□□□□ -1.63
CDS1	YBR029C	CSM3	Q04659	317 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	YDL109C	Q12103	647 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	IZH2	Q12442	317 aa		4.87	□□□□□ -1.63
CDS1	YBR029C	HEM4	P06174	275 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	CAR2	P07991	424 aa	Known RBP	4.86	□□□□□ -1.63
CDS1	YBR029C	DCC1	P25559	380 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	ERG9	P29704	444 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	RFS1	P38234	210 aa	Known RBP	4.86	□□□□□ -1.63
CDS1	YBR029C	VPS45	P38932	577 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	DFG10	P40526	253 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	CIN2	P46670	268 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	CRH1	P53301	507 aa		4.86	□□□□□ -1.63
CDS1	YBR029C	DNL4	Q08387	944 aa	Predicted RBP	4.86	□□□□□ -1.63
CDS1	YBR029C	STE2	D6VTK4	431 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	YMR262W	P38430	313 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	MMS21	P38632	267 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	FET3	P38993	636 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	FHL1	P39521	936 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	EGT2	P42835	1041 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	YGL242C	P53066	181 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	SHY1	P53266	389 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	PXR1	P53335	271 aa	Predicted RBP	4.85	□□□□□ -1.63
CDS1	YBR029C	SPO19	Q03029	223 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	APC4	Q04601	652 aa		4.85	□□□□□ -1.63
CDS1	YBR029C	SAM4	Q08985	325 aa	Known RBP	4.85	□□□□□ -1.63
CDS1	YBR029C	MSS116	P15424	664 aa	Known RBP	4.84	□□□□□ -1.63
CDS1	YBR029C	RAD23	P32628	398 aa	Known RBP	4.84	□□□□□ -1.63
CDS1	YBR029C	YPI1	P43587	155 aa		4.84	□□□□□ -1.63
CDS1	YBR029C	HCH1	P53834	153 aa		4.84	□□□□□ -1.63
CDS1	YBR029C	YTH1	Q06102	208 aa	Predicted RBP	4.84	□□□□□ -1.63
CDS1	YBR029C	NAG1	Q8TGN9	163 aa		4.84	□□□□□ -1.63
CDS1	YBR029C	RPL23A	P0CX41	137 aa	Known RBP	4.83	□□□□□ -1.64
CDS1	YBR029C	RPL23B	P0CX42	137 aa	Known RBP	4.83	□□□□□ -1.64
CDS1	YBR029C	YUR1	P26725	428 aa		4.83	□□□□□ -1.64
CDS1	YBR029C	RPC25	P35718	212 aa		4.83	□□□□□ -1.64
CDS1	YBR029C	MRPL10	P36520	322 aa		4.83	□□□□□ -1.64
CDS1	YBR029C	LSM12	P38828	187 aa	Known RBP	4.83	□□□□□ -1.64
CDS1	YBR029C	YCH1	P42937	148 aa		4.83	□□□□□ -1.64
CDS1	YBR029C	GAS2	Q06135	555 aa		4.83	□□□□□ -1.64
CDS1	YBR029C	FDH1	Q08911	376 aa		4.83	□□□□□ -1.64
CDS1	YBR029C	RRP36	Q12481	300 aa	Predicted RBP	4.83	□□□□□ -1.64
CDS1	YBR029C	SEC7	P11075	2009 aa	Known RBP	4.82	□□□□□ -1.64
CDS1	YBR029C	PEX18	P38855	283 aa		4.82	□□□□□ -1.64
CDS1	YBR029C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
CDS1	YBR029C	ECM18	Q04623	453 aa		4.82	□□□□□ -1.64
CDS1	YBR029C	ERV41	Q04651	352 aa		4.82	□□□□□ -1.64
CDS1	YBR029C	CHA1	P25379	360 aa	Known RBP	4.81	□□□□□ -1.64
CDS1	YBR029C	INA22	P40576	216 aa		4.81	□□□□□ -1.64
CDS1	YBR029C	CDC40	P40968	455 aa	Predicted RBP	4.81	□□□□□ -1.64
CDS1	YBR029C	BNS1	P50084	137 aa		4.81	□□□□□ -1.64
CDS1	YBR029C	LSG1	P53145	640 aa	Known RBP	4.81	□□□□□ -1.64
CDS1	YBR029C	PLP2	Q12017	286 aa		4.81	□□□□□ -1.64
CDS1	YBR029C	GCN2	P15442	1659 aa		4.81	□□□□□ -1.64
CDS1	YBR029C	RAD7	P06779	565 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	AAT2	P23542	418 aa	Known RBP	4.8	□□□□□ -1.64
CDS1	YBR029C	LDS1	P31379	325 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	HXT1	P32465	570 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	MEI5	P32489	222 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	ANR2	P36090	516 aa	Predicted RBP	4.8	□□□□□ -1.64
CDS1	YBR029C	PTI1	P39927	425 aa	Predicted RBP	4.8	□□□□□ -1.64
CDS1	YBR029C	OXA1	P39952	402 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	AIM10	P39965	576 aa	Known RBP	4.8	□□□□□ -1.64
CDS1	YBR029C	ATG18	P43601	500 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	GTO1	P48239	356 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	FSH2	Q05015	223 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	MFG1	Q07684	458 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	ALE1	Q08548	619 aa		4.8	□□□□□ -1.64
CDS1	YBR029C	RRG7	Q08774	242 aa	Predicted RBP	4.8	□□□□□ -1.64
CDS1	YBR029C	RPL5	P26321	297 aa	Known RBP	4.79	□□□□□ -1.64
CDS1	YBR029C	ICL1	P28240	557 aa	Predicted RBP	4.79	□□□□□ -1.64
CDS1	YBR029C	YKL162C	P36052	402 aa		4.79	□□□□□ -1.64
CDS1	YBR029C	YKL070W	P36087	169 aa		4.79	□□□□□ -1.64
CDS1	YBR029C	GCD14	P46959	383 aa	Predicted RBP	4.79	□□□□□ -1.64
CDS1	YBR029C	EMC2	P47133	292 aa	Known RBP	4.79	□□□□□ -1.64
CDS1	YBR029C	RPN14	P53196	417 aa		4.79	□□□□□ -1.64
CDS1	YBR029C	TRM82	Q03774	444 aa		4.79	□□□□□ -1.64
CDS1	YBR029C	DDC1	Q08949	612 aa		4.79	□□□□□ -1.64
CDS1	YBR029C	HAP1	P0CE41	1502 aa		4.79	□□□□□ -1.64
CDS1	YBR029C	TY1B-NL2	Q99337	1749 aa	Known RBP	4.79	□□□□□ -1.64
CDS1	YBR029C	ADH2	P00331	348 aa	Known RBP	4.78	□□□□□ -1.64
CDS1	YBR029C	GIT1	P25346	518 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	MND1	P53102	219 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	IRC4	Q03036	179 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	UBX2	Q04228	584 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	YHC1	Q05900	231 aa	Known RBP	4.78	□□□□□ -1.64
CDS1	YBR029C	FRE8	Q12209	686 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	PDR5	P33302	1511 aa	Known RBP	4.78	□□□□□ -1.64
CDS1	YBR029C	MIR1	P23641	311 aa	Known RBP	4.78	□□□□□ -1.64
CDS1	YBR029C	RVS161	P25343	265 aa	Known RBP	4.78	□□□□□ -1.64
CDS1	YBR029C	CSM1	P25651	190 aa		4.78	□□□□□ -1.64
CDS1	YBR029C	COS9	P36034	407 aa		4.78	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms