RNA–Protein interactions for RNA: ENST00000575663.5

SMG6-219, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG6, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-219ENST00000575663 FNDC1Q4ZHG4 1894 aaPredicted RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 CCDC195A0A1B0GUA6 201 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 LOC105378220A0A1B0GUY1 285 aaPredicted RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 INPPL1O15357 1258 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 NCAM2O15394 837 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 LILRB5O75023 590 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 LRP3O75074 770 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 GPR32O75388 356 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 GLUD1P00367 558 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 SSBP05455 408 aaKnown RBP eCLIP6.7□□□□□ -1.34
SMG6-219ENST00000575663 URODP06132 367 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 SKIP12755 728 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 TMOD1P28289 359 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 NRLP54845 237 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 PFKPQ01813 784 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 TRDNQ13061 729 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 SEC23AQ15436 765 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 MLF2Q15773 248 aaPredicted RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 IL31Q6EBC2 164 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 LAIR1Q6GTX8 287 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 PDXDC2PQ6P474 469 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 GLB1LQ6UWU2 654 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 RSPO2Q6UXX9 243 aaPredicted RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 TMEM173Q86WV6 379 aaPredicted RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 CKAP2LQ8IYA6 745 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 FEZF2Q8TBJ5 459 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 SMG7Q92540 1137 aaKnown RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 KLHL5Q96PQ7 755 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 MYADMQ96S97 322 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 PARD6AQ9NPB6 346 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 ZNF302Q9NR11 478 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 KCNH7Q9NS40 1196 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 TCEAL9Q9UHQ7 104 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 ZFP37Q9Y6Q3 630 aaPredicted RBP6.7□□□□□ -1.34
SMG6-219ENST00000575663 SALL3Q9BXA9 1300 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 LOXHD1Q8IVV2 1947 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 OTOGLQ3ZCN5 2332 aa6.7□□□□□ -1.34
SMG6-219ENST00000575663 CEP250Q9BV73 2442 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 FAM170BA6NMN3 283 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 ANHXE9PGG2 379 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 IFIT3O14879 490 aaKnown RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 LRRN2O75325 713 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 C22orf31O95567 290 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 GALTP07902 379 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 CNPP09543 421 aaKnown RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 LAMP2P13473 410 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 EIF4BP23588 611 aaKnown RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 PMLP29590 882 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 CLCN3P51790 818 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 AK2P54819 239 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 NLRP11P59045 1033 aaKnown RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 SHC2P98077 582 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 SPEM2Q0P670 501 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 SNW1Q13573 536 aaKnown RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 HTR4Q13639 388 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 SLC35G1Q2M3R5 365 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 ZBTB41Q5SVQ8 909 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 MIS18BP1Q6P0N0 1132 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 MTSS1LQ765P7 747 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 CATIPQ7Z7H3 387 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 ZNF598Q86UK7 904 aaKnown RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 CCDC60Q8IWA6 550 aaPredicted RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 CTCFLQ8NI51 663 aaPredicted RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 URGCPQ8TCY9 931 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 HDAC7Q8WUI4 952 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 BBXQ8WY36 941 aaPredicted RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 RILPL2Q969X0 211 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 COL26A1Q96A83 441 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 MXRA8Q9BRK3 442 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 DSCC1Q9BVC3 393 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 SPZ1Q9BXG8 430 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 GBP3Q9H0R5 595 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 PSTPIP2Q9H939 334 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 LTB4R2Q9NPC1 389 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 PRMT8Q9NR22 394 aaPredicted RBP6.69□□□□□ -1.34
SMG6-219ENST00000575663 TBC1D13Q9NVG8 400 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 INPP5FQ9Y2H2 1132 aa6.69□□□□□ -1.34
SMG6-219ENST00000575663 IGKV6D-21A0A0A0MT36 114 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 HIP1O00291 1037 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 C2CD2LO14523 706 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 MAGEB2O15479 319 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 ATG7O95352 703 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 SOD2P04179 222 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 NEFLP07196 543 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 PROS1P07225 676 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 RETP07949 1114 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 TGM1P22735 817 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 SFPQP23246 707 aaKnown RBP eCLIP6.68□□□□□ -1.34
SMG6-219ENST00000575663 PHKA2P46019 1235 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 RPS9P46781 194 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 SLC11A1P49279 550 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 RAB27AP51159 221 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 PDE1AP54750 535 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 TROAPQ12815 778 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 WTAPQ15007 396 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 UBE2SQ16763 222 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 NOMO2Q5JPE7 1267 aa6.68□□□□□ -1.34
SMG6-219ENST00000575663 TWF2Q6IBS0 349 aaKnown RBP6.68□□□□□ -1.34
SMG6-219ENST00000575663 PRR23CQ6ZRP0 262 aa6.68□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms