RNA–Protein interactions for RNA: ENST00000471117.5

FDPS-209, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 3

Gene FDPS, Length 630 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-209ENST00000471117 COBLL1Q53SF7 1204 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 CDKAL1Q5VV42 579 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 OLFML2BQ68BL8 750 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 PTCRAQ6ISU1 281 aaPredicted RBP9.24□□□□□ -0.93
FDPS-209ENST00000471117 PSRC1Q6PGN9 363 aaPredicted RBP9.24□□□□□ -0.93
FDPS-209ENST00000471117 OTOP2Q7RTS6 562 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 CCDC186Q7Z3E2 898 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 ZSCAN30Q86W11 494 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 CCDC65Q8IXS2 484 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 SMAP1Q8IYB5 467 aaPredicted RBP9.24□□□□□ -0.93
FDPS-209ENST00000471117 KIAA0895Q8NCT3 520 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 ARNTL2Q8WYA1 636 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 ZNF830Q96NB3 372 aaPredicted RBP9.24□□□□□ -0.93
FDPS-209ENST00000471117 NAP1L5Q96NT1 182 aaPredicted RBP9.24□□□□□ -0.93
FDPS-209ENST00000471117 NACC1Q96RE7 527 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 ABHD16BQ9H3Z7 469 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 PANK4Q9NVE7 773 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 NRBP1Q9UHY1 535 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 DDX41Q9UJV9 622 aaKnown RBP9.24□□□□□ -0.93
FDPS-209ENST00000471117 USP24Q9UPU5 2620 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 CEP250Q9BV73 2442 aa9.24□□□□□ -0.93
FDPS-209ENST00000471117 MYH11P35749 1972 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 RBM47A0AV96 593 aaKnown RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 TRIM49BA6NDI0 452 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 DKC1O60832 514 aaKnown RBP eCLIP9.23□□□□□ -0.93
FDPS-209ENST00000471117 GGPS1O95749 300 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 SNAI1O95863 264 aaPredicted RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 CCNE2O96020 404 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 P4HBP07237 508 aaKnown RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 PSAPP07602 524 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 TXNP10599 105 aaKnown RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 KCNA5P22460 613 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 PTGS1P23219 599 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 PMS1P54277 932 aaKnown RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 ACTR2P61160 394 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 SP2Q02086 613 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 SP4Q02446 784 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 CACNB1Q02641 598 aaPredicted RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 RAD51AP2Q09MP3 1159 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 ACVR2BQ13705 512 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 GIT2Q14161 759 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 CCDC144BQ3MJ40 725 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 FAM26FQ5R3K3 315 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 PRAMEF19Q5SWL8 479 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 TTI2Q6NXR4 508 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 TAPT1Q6NXT6 567 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 MIS18BP1Q6P0N0 1132 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 CCDC62Q6P9F0 684 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 METTL7BQ6UX53 244 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 CYFIP1Q7L576 1253 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 BANK1Q8NDB2 785 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 PIGOQ8TEQ8 1089 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 P2RX5Q93086 422 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 LXNQ9BS40 222 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 PPP1R12CQ9BZL4 782 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 BHMT2Q9H2M3 363 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 UBE2ZQ9H832 354 aaPredicted RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 MLXIPQ9HAP2 919 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 ZHX1Q9UKY1 873 aaPredicted RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 PHF24Q9UPV7 400 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 ZKSCAN5Q9Y2L8 839 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 PCDHA10Q9Y5I2 948 aa9.23□□□□□ -0.93
FDPS-209ENST00000471117 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.23□□□□□ -0.93
FDPS-209ENST00000471117 COL4A4P53420 1690 aaPredicted RBP9.23□□□□□ -0.93
FDPS-209ENST00000471117 BICDL2A1A5D9 508 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 FRMD3A2A2Y4 597 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 NOP56O00567 594 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 ZBTB39O15060 712 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 NKRFO15226 690 aaKnown RBP eCLIP9.22□□□□□ -0.93
FDPS-209ENST00000471117 SORBS3O60504 671 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 ARIH2O95376 493 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 IGHA2P01877 340 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 FGBP02675 491 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 CA3P07451 260 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 SUPT20HL2P0C7V6 817 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 QARSP47897 775 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 PSMC5P62195 406 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 SPAG1Q07617 926 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 LY6KQ17RY6 165 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 LEXMQ3ZCV2 418 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 HERC4Q5GLZ8 1057 aaPredicted RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 CELF3Q5SZQ8 465 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 ANKRD40Q6AI12 368 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 IQSEC1Q6DN90 963 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 RINT1Q6NUQ1 792 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 TMC6Q7Z403 805 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 FILIP1Q7Z7B0 1213 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 DHX37Q8IY37 1157 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 GUF1Q8N442 669 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 TMEM199Q8N511 208 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 NOC3LQ8WTT2 800 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 ATP6V0A1Q93050 837 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 PBXIP1Q96AQ6 731 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 PRRX2Q99811 253 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 DUSP9Q99956 384 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 RUSC1Q9BVN2 902 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 KATNBL1Q9H079 304 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 MTIF3Q9H2K0 278 aaKnown RBP9.22□□□□□ -0.93
FDPS-209ENST00000471117 ZHX3Q9H4I2 956 aa9.22□□□□□ -0.93
FDPS-209ENST00000471117 ZSWIM4Q9H7M6 989 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms