RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 KLRC2P26717 231 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 SREBF1P36956 1147 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 RNASELQ05823 741 aaKnown RBP21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 DDX53Q86TM3 631 aaKnown RBP21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 TMEM173Q86WV6 379 aaPredicted RBP21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 ZNF710Q8N1W2 664 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 RIN2Q8WYP3 895 aaPredicted RBP21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 LRRC2Q9BYS8 371 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 GBP3Q9H0R5 595 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 INPP5FQ9Y2H2 1132 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 DENND4AQ7Z401 1863 aa21.47■■□□□ 1.03
NCKIPSD-209ENST00000470006 FAM86B1E9PN63 330 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 DHX15O43143 795 aaKnown RBP21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 SSBP05455 408 aaKnown RBP eCLIP21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 FAM86B2P0C5J1 330 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 LIFRP42702 1097 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 AP3B2Q13367 1082 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 SPECC1Q5M775 1068 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 JAKMIP3Q5VZ66 844 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 TYW1BQ6NUM6 668 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 PPP1R18Q6NYC8 613 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 ZNF598Q86UK7 904 aaKnown RBP21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 MAP4K1Q92918 833 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 IGSF21Q96ID5 467 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 EMILIN2Q9BXX0 1053 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 TBC1D22BQ9NU19 505 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 IGSF9Q9P2J2 1179 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 PCDHA10Q9Y5I2 948 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 IRAK3Q9Y616 596 aa21.46■■□□□ 1.03
NCKIPSD-209ENST00000470006 CARNS1A5YM72 827 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 SGSM2O43147 1006 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 NARSO43776 548 aaKnown RBP21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 CSDE1O75534 798 aaKnown RBP21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 DARSP14868 501 aaKnown RBP21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 GBP2P32456 591 aaPredicted RBP21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 LETM2Q2VYF4 491 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 ZNF746Q6NUN9 644 aaPredicted RBP21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 SMAP1Q8IYB5 467 aaPredicted RBP21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 LPPQ93052 612 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 FAM167AQ96KS9 214 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 GLT8D2Q9H1C3 349 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 NRBP2Q9NSY0 501 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 CA14Q9ULX7 337 aa21.45■■□□□ 1.02
NCKIPSD-209ENST00000470006 GPC3P51654 580 aa21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 PUM1Q14671 1186 aaKnown RBP eCLIP21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 NONOQ15233 471 aaKnown RBP eCLIP21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 TWF2Q6IBS0 349 aaKnown RBP21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 GLB1LQ6UWU2 654 aa21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 V9GY48 417 aaPredicted RBP21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 FRYLO94915 3013 aa21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 CACNA1BQ00975 2339 aa21.44■■□□□ 1.02
NCKIPSD-209ENST00000470006 C2orf16Q68DN1 1984 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 GALTP07902 379 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 PTPN14Q15678 1187 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 ZC3H14Q6PJT7 736 aaKnown RBP21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 TEX2Q8IWB9 1127 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 RSAD2Q8WXG1 361 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 NRDE2Q9H7Z3 1164 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 WNT16Q9UBV4 365 aa21.43■■□□□ 1.02
NCKIPSD-209ENST00000470006 PHKA2P46019 1235 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 NOMO2Q5JPE7 1267 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 BCL7CQ8WUZ0 217 aaPredicted RBP21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 CNTNAP5Q8WYK1 1306 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 KLHL5Q96PQ7 755 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 GCOM2Q9BZD3 368 aaPredicted RBP21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 TBC1D17Q9HA65 648 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 CHST12Q9NRB3 414 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 TBC1D13Q9NVG8 400 aa21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 RBM28Q9NW13 759 aaKnown RBP21.42■■□□□ 1.02
NCKIPSD-209ENST00000470006 IGLV3-22A0A075B6J6 115 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 KRBA1A5PL33 1030 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 OATP04181 439 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 SKIP12755 728 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 CLCN4P51793 760 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 SETQ01105 290 aaPredicted RBP21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 TBC1D8BQ0IIM8 1120 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 LINC01465Q8N7H1 131 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 RSPH1Q8WYR4 309 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 BARHL2Q9NY43 387 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 DNAJB4Q9UDY4 337 aa21.41■■□□□ 1.02
NCKIPSD-209ENST00000470006 DNAH14Q0VDD8 3507 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 WDR81Q562E7 1941 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 C2CD2LO14523 706 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 DCNP07585 359 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 CNPP09543 421 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 MYBP10242 640 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 SLC11A1P49279 550 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 CLK2P49760 499 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 COL9A3Q14050 684 aaPredicted RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 C15orf39Q6ZRI6 1047 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 RUBCNQ92622 972 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 STAMQ92783 540 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 FAM193BQ96PV7 902 aaPredicted RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 MRPL17Q9NRX2 175 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 PIN4Q9Y237 131 aaKnown RBP21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 NCOR2Q9Y618 2525 aa21.4■■□□□ 1.02
NCKIPSD-209ENST00000470006 WDR64B1ANS9 1081 aa21.39■■□□□ 1.01
NCKIPSD-209ENST00000470006 hCG_1984214I3L0E3 225 aa21.39■■□□□ 1.01
NCKIPSD-209ENST00000470006 SFPQP23246 707 aaKnown RBP eCLIP21.39■■□□□ 1.01
NCKIPSD-209ENST00000470006 PRKCEQ02156 737 aa21.39■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms