RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 GPRC5CQ9NQ84 441 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 C1orf112Q9NSG2 853 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 FOXD4L1Q9NU39 408 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 TMEM161AQ9NX61 479 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 PLAGL2Q9UPG8 496 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 COL4A3BPQ9Y5P4 624 aa14.23□□□□□ -0.13
GPC1-204ENST00000426280 KIAA1671Q9BY89 1806 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 K7ELQ4 463 aaPredicted RBP14.22□□□□□ -0.13
GPC1-204ENST00000426280 CDC25AP30304 524 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 HOXA11P31270 313 aaPredicted RBP14.22□□□□□ -0.13
GPC1-204ENST00000426280 ARL2P36404 184 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 DNM2P50570 870 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 PTGDRQ13258 359 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 TCEAL5Q5H9L2 206 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 POTEGQ6S5H5 508 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 MAEAQ7L5Y9 396 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 OTUD6AQ7L8S5 288 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 FERMT3Q86UX7 667 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 RNF169Q8NCN4 708 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 ATXN2LQ8WWM7 1075 aaKnown RBP14.22□□□□□ -0.13
GPC1-204ENST00000426280 ELAC1Q9H777 363 aaKnown RBP14.22□□□□□ -0.13
GPC1-204ENST00000426280 ANKEF1Q9NU02 776 aa14.22□□□□□ -0.13
GPC1-204ENST00000426280 ATG2AQ2TAZ0 1938 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 A0A0C4DFX4 3053 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 FNDC1Q4ZHG4 1894 aaPredicted RBP14.21□□□□□ -0.13
GPC1-204ENST00000426280 ARID2Q68CP9 1835 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP14.21□□□□□ -0.13
GPC1-204ENST00000426280 A0A0U1RQF3 1178 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 DKC1O60832 514 aaKnown RBP eCLIP14.21□□□□□ -0.13
GPC1-204ENST00000426280 RB1P06400 928 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 ZSCAN20P17040 1043 aaPredicted RBP14.21□□□□□ -0.13
GPC1-204ENST00000426280 GLRA2P23416 452 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 PBX3P40426 434 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 RFC5P40937 340 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 AFF1P51825 1210 aaKnown RBP14.21□□□□□ -0.13
GPC1-204ENST00000426280 ODR4Q5SWX8 454 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 UBXN11Q5T124 520 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 ADGRD2Q7Z7M1 963 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 ZNF410Q86VK4 478 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 SLC7A3Q8WY07 619 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 ATP6V0A4Q9HBG4 840 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.21□□□□□ -0.13
GPC1-204ENST00000426280 SMC3Q9UQE7 1217 aa14.21□□□□□ -0.13
GPC1-204ENST00000426280 B4GALT3O60512 393 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 TRAPPC10P48553 1259 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 MRPS5P82675 430 aaKnown RBP14.2□□□□□ -0.14
GPC1-204ENST00000426280 GNL2Q13823 731 aaKnown RBP14.2□□□□□ -0.14
GPC1-204ENST00000426280 CAPSQ13938 189 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 TJAP1Q5JTD0 557 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 MCTP1Q6DN14 999 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 HSCBQ8IWL3 235 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 RNF149Q8NC42 400 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 HELQQ8TDG4 1101 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 PSPC1Q8WXF1 523 aaKnown RBP14.2□□□□□ -0.14
GPC1-204ENST00000426280 BSNDQ8WZ55 320 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 MTRQ99707 1265 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 MMTAG2Q9BU76 263 aaKnown RBP14.2□□□□□ -0.14
GPC1-204ENST00000426280 POLR3CQ9BUI4 534 aaPredicted RBP14.2□□□□□ -0.14
GPC1-204ENST00000426280 TUFT1Q9NNX1 390 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 USP20Q9Y2K6 914 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 RALGAPA2Q2PPJ7 1873 aa14.2□□□□□ -0.14
GPC1-204ENST00000426280 TTLL13PA6NNM8 815 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 LINC01565O15544 149 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 USO1O60763 962 aaKnown RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 RPA1P27694 616 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 LTBRP36941 435 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 PHKA2P46019 1235 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 FXR2P51116 673 aaKnown RBP eCLIP14.19□□□□□ -0.14
GPC1-204ENST00000426280 PTENP60484 403 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 ERVFC1P60507 584 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 CDC42EP1Q00587 391 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 DLX2Q07687 328 aaPredicted RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 HYAL1Q12794 435 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 CATSPER4Q7RTX7 472 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 KCNK18Q7Z418 384 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 CDR2LQ86X02 465 aaPredicted RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 ZNF710Q8N1W2 664 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 COLGALT1Q8NBJ5 622 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 NEK9Q8TD19 979 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 HLA-CQ95604 372 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 JPH2Q9BR39 696 aaPredicted RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 C11orf84Q9BUA3 381 aaPredicted RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 TMEM117Q9H0C3 514 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 RNF39Q9H2S5 420 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 PIN4Q9Y237 131 aaKnown RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 PPME1Q9Y570 386 aa14.19□□□□□ -0.14
GPC1-204ENST00000426280 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
GPC1-204ENST00000426280 NT5C1B-RDH14C9J2C7 533 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 B4GALT5O43286 388 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 DGAT1O75907 488 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 EDN1P05305 212 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 XRCC6P12956 609 aaKnown RBP eCLIP14.18□□□□□ -0.14
GPC1-204ENST00000426280 RBM10P98175 930 aaKnown RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 ORC2Q13416 577 aaPredicted RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 AMHR2Q16671 573 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 LARP1BQ659C4 914 aaKnown RBP14.18□□□□□ -0.14
GPC1-204ENST00000426280 AGMOQ6ZNB7 445 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 SRGAP1Q7Z6B7 1085 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 IGSF22Q8N9C0 903 aa14.18□□□□□ -0.14
GPC1-204ENST00000426280 SPRYD3Q8NCJ5 442 aa14.18□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms