RNA–Protein interactions for RNA: ENSMUST00000088790.8

Ret-202, Transcript of Proto-oncogene tyrosine-protein kinase receptor Ret, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ret, Length 4,497 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ret-202ENSMUST00000088790 Mylk3Q3UIZ8 795 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Lrrn2Q6PHP6 730 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Rnf112Q96DY5 654 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Orc3Q9JK30 715 aaKnown RBP17■□□□□ 0.31
Ret-202ENSMUST00000088790 Nup62clA2AG10 272 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Vamp7P70280 220 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Ece1Q4PZA2 769 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 FcgrtQ61559 365 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 TwistnbQ78WZ7 330 aaKnown RBP17■□□□□ 0.31
Ret-202ENSMUST00000088790 Znf12Q7TSI0 686 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Slc7a14Q8BXR1 771 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 Cttnbp2nlQ99LJ0 638 aa17■□□□□ 0.31
Ret-202ENSMUST00000088790 SynrgQ5SV85 1306 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Ifnb1P01575 182 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Slc8a1P70414 970 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Tmem35bQ3U0Y2 150 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Vipas39Q8BGQ1 491 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Ppp4r1Q8K2V1 951 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Psmd6Q99JI4 389 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Extl2Q9ES89 330 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Mtmr1Q9Z2C4 669 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Gm43738A0A0G2JEA5 862 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Zfp984A2A7A2 547 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Lrriq4A6H6A4 596 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Men1O88559 611 aaKnown RBP16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Got1P05201 413 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 4931408C20RikE9PWP9 1381 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Ttc13A0A1L1SSC7 844 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Vti1aO89116 217 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Rtel1Q0VGM9 1203 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 DaglaQ6WQJ1 1044 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Polr3fQ921X6 316 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Pcsk1nQ9QXV0 258 aa16.99■□□□□ 0.31
Ret-202ENSMUST00000088790 Eno1P17182 434 aaKnown RBP16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Sult1d1Q3UZZ6 295 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Nt5c2Q3V1L4 560 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Zbtb8osQ505B7 168 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Pla2g4cQ64GA5 597 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Clca4aQ6Q473 924 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Cyfip1Q7TMB8 1253 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Pih1h3bQ8C6P5 218 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Gga1Q8R0H9 635 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Ces4aQ8R0W5 563 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Reep2Q8VCD6 254 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Fam129cD3YZB0 591 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Xbp1O35426 267 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Orc4O88708 433 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 CraddO88843 199 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 BcrQ6PAJ1 1270 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Zfp449Q8CB76 518 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Tph2Q8CGV2 488 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Krt17Q9QWL7 433 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Cyth1Q9QX11 398 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Scgb2b18A0A087WPA9 112 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Cul4bA2A432 970 aaKnown RBP16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Lrrc63A6H694 637 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Rexo5D3YW29 759 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Slc3a2P10852 526 aaKnown RBP16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Myo1gQ5SUA5 1024 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Adat2Q6P6J0 191 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Ago2Q8CJG0 860 aaKnown RBP16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Ube2sQ921J4 223 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 NptxrQ99J85 493 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Tmem206Q9D771 350 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Riok3Q9DBU3 519 aaKnown RBP16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Gm9774A0A0A6YVU8 407 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Casp2P29594 452 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Mmp20P57748 482 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Taf1bP97358 586 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 OtulinQ3UCV8 352 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Apol9bQ8C7I4 310 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Nemp2Q8CB65 421 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Zcchc18Q8VD24 393 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Apol9aQ8VDU3 310 aa16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 Hspbp1Q99P31 357 aaKnown RBP16.98■□□□□ 0.31
Ret-202ENSMUST00000088790 StamP70297 548 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Trmt2aQ8BNV1 574 aaKnown RBP16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 KynuQ9CXF0 464 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Aldh1b1Q9CZS1 519 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Pramef12Q9D2F1 463 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Chmp2aQ9DB34 222 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Q3UJP5 209 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Odr4Q4PJX1 447 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Spdye4aQ5IBH6 268 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Gucy2fQ5SDA5 1108 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Ppp2r2aQ6P1F6 447 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Sh3tc2Q80VA5 1289 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Fam49aQ8BHZ0 323 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Leng8Q8CBY3 785 aaKnown RBP16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Olfr805Q8VFI4 319 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Ccdc182Q9D9C6 152 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Dkc1Q9ESX5 509 aaKnown RBP16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Krt27Q9Z320 448 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 G3bp2P97379 482 aaKnown RBP16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Anapc5Q8BTZ4 740 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Slc40a1Q9JHI9 570 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Ror2Q9Z138 944 aa16.97■□□□□ 0.31
Ret-202ENSMUST00000088790 Ccdc175E9PVB3 822 aa16.96■□□□□ 0.31
Ret-202ENSMUST00000088790 Rfpl4bJ3QPR6 266 aa16.96■□□□□ 0.31
Ret-202ENSMUST00000088790 Acot5Q6Q2Z6 421 aa16.96■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 33.7 ms