Protein–RNA interactions for Protein: Q8VD24

Zcchc18, Zinc finger CCHC domain-containing protein 18, mousemouse

Predictions only

Length 393 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Zcchc18Q8VD24 Gm25239-201ENSMUST00000174915 86 ntBASIC43.78■■■■■ 4.6
Zcchc18Q8VD24 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC40.48■■■■■ 4.07
Zcchc18Q8VD24 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC40.03■■■■■ 4
Zcchc18Q8VD24 Gm15042-201ENSMUST00000120212 883 ntBASIC38.23■■■■□ 3.71
Zcchc18Q8VD24 Gm24109-201ENSMUST00000175489 103 ntBASIC37.91■■■■□ 3.66
Zcchc18Q8VD24 Gm15045-201ENSMUST00000117359 883 ntBASIC37.31■■■■□ 3.56
Zcchc18Q8VD24 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC37.17■■■■□ 3.54
Zcchc18Q8VD24 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC36.99■■■■□ 3.51
Zcchc18Q8VD24 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC36.94■■■■□ 3.5
Zcchc18Q8VD24 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC36.87■■■■□ 3.49
Zcchc18Q8VD24 Gm23366-201ENSMUST00000175022 89 ntBASIC36.64■■■■□ 3.46
Zcchc18Q8VD24 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC36.43■■■■□ 3.42
Zcchc18Q8VD24 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC36.4■■■■□ 3.42
Zcchc18Q8VD24 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC35.82■■■■□ 3.33
Zcchc18Q8VD24 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC35.71■■■■□ 3.31
Zcchc18Q8VD24 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC35.38■■■■□ 3.25
Zcchc18Q8VD24 AC153911.1-202ENSMUST00000218534 1034 ntBASIC35.37■■■■□ 3.25
Zcchc18Q8VD24 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC35.14■■■■□ 3.22
Zcchc18Q8VD24 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC35.12■■■■□ 3.21
Zcchc18Q8VD24 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC35.09■■■■□ 3.21
Zcchc18Q8VD24 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC35.07■■■■□ 3.2
Zcchc18Q8VD24 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC35.06■■■■□ 3.2
Zcchc18Q8VD24 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC34.91■■■■□ 3.18
Zcchc18Q8VD24 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
Zcchc18Q8VD24 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
Zcchc18Q8VD24 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC34.74■■■■□ 3.15
Zcchc18Q8VD24 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
Zcchc18Q8VD24 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC34.68■■■■□ 3.14
Zcchc18Q8VD24 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
Zcchc18Q8VD24 Gm25238-201ENSMUST00000174914 89 ntBASIC34.54■■■■□ 3.12
Zcchc18Q8VD24 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC34.54■■■■□ 3.12
Zcchc18Q8VD24 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC34.51■■■■□ 3.12
Zcchc18Q8VD24 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC34.5■■■■□ 3.11
Zcchc18Q8VD24 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC34.43■■■■□ 3.1
Zcchc18Q8VD24 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC34.2■■■■□ 3.07
Zcchc18Q8VD24 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC34.02■■■■□ 3.04
Zcchc18Q8VD24 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC34.01■■■■□ 3.04
Zcchc18Q8VD24 Psd-208ENSMUST00000224556 2034 ntBASIC33.82■■■■□ 3
Zcchc18Q8VD24 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC33.8■■■■□ 3
Zcchc18Q8VD24 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC33.77■■■■□ 3
Zcchc18Q8VD24 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC33.74■■■□□ 2.99
Zcchc18Q8VD24 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC33.71■■■□□ 2.99
Zcchc18Q8VD24 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC33.64■■■□□ 2.98
Zcchc18Q8VD24 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC33.61■■■□□ 2.97
Zcchc18Q8VD24 Gm27325-201ENSMUST00000175467 74 ntBASIC33.5■■■□□ 2.95
Zcchc18Q8VD24 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC33.39■■■□□ 2.94
Zcchc18Q8VD24 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC33.31■■■□□ 2.92
Zcchc18Q8VD24 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC33.29■■■□□ 2.92
Zcchc18Q8VD24 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC33.27■■■□□ 2.92
Zcchc18Q8VD24 Gm25262-201ENSMUST00000174934 133 ntBASIC33.23■■■□□ 2.91
Zcchc18Q8VD24 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC33.21■■■□□ 2.91
Zcchc18Q8VD24 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC33.05■■■□□ 2.88
Zcchc18Q8VD24 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC33.03■■■□□ 2.88
Zcchc18Q8VD24 Rab21-202ENSMUST00000218831 843 ntBASIC32.97■■■□□ 2.87
Zcchc18Q8VD24 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC32.95■■■□□ 2.87
Zcchc18Q8VD24 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC32.95■■■□□ 2.87
Zcchc18Q8VD24 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC32.89■■■□□ 2.86
Zcchc18Q8VD24 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC32.77■■■□□ 2.84
Zcchc18Q8VD24 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC32.77■■■□□ 2.84
Zcchc18Q8VD24 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC32.7■■■□□ 2.83
Zcchc18Q8VD24 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC32.69■■■□□ 2.82
Zcchc18Q8VD24 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC32.68■■■□□ 2.82
Zcchc18Q8VD24 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC32.58■■■□□ 2.81
Zcchc18Q8VD24 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Zcchc18Q8VD24 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC32.57■■■□□ 2.8
Zcchc18Q8VD24 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC32.56■■■□□ 2.8
Zcchc18Q8VD24 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC32.5■■■□□ 2.79
Zcchc18Q8VD24 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC32.5■■■□□ 2.79
Zcchc18Q8VD24 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC32.45■■■□□ 2.79
Zcchc18Q8VD24 Gm26115-201ENSMUST00000175605 87 ntBASIC32.43■■■□□ 2.78
Zcchc18Q8VD24 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC32.43■■■□□ 2.78
Zcchc18Q8VD24 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC32.4■■■□□ 2.78
Zcchc18Q8VD24 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC32.39■■■□□ 2.78
Zcchc18Q8VD24 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC32.37■■■□□ 2.77
Zcchc18Q8VD24 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC32.36■■■□□ 2.77
Zcchc18Q8VD24 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC32.35■■■□□ 2.77
Zcchc18Q8VD24 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC32.32■■■□□ 2.76
Zcchc18Q8VD24 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC32.31■■■□□ 2.76
Zcchc18Q8VD24 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC32.27■■■□□ 2.76
Zcchc18Q8VD24 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC32.27■■■□□ 2.76
Zcchc18Q8VD24 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Zcchc18Q8VD24 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC32.16■■■□□ 2.74
Zcchc18Q8VD24 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC32.15■■■□□ 2.74
Zcchc18Q8VD24 Gm8109-201ENSMUST00000194076 746 ntBASIC32.14■■■□□ 2.74
Zcchc18Q8VD24 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC32.12■■■□□ 2.73
Zcchc18Q8VD24 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
Zcchc18Q8VD24 Gm10524-201ENSMUST00000181931 1893 ntBASIC32.07■■■□□ 2.72
Zcchc18Q8VD24 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zcchc18Q8VD24 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zcchc18Q8VD24 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC32.06■■■□□ 2.72
Zcchc18Q8VD24 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC32.05■■■□□ 2.72
Zcchc18Q8VD24 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC32.02■■■□□ 2.72
Zcchc18Q8VD24 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC32.01■■■□□ 2.71
Zcchc18Q8VD24 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
Zcchc18Q8VD24 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC31.95■■■□□ 2.71
Zcchc18Q8VD24 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
Zcchc18Q8VD24 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
Zcchc18Q8VD24 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC31.83■■■□□ 2.69
Zcchc18Q8VD24 CT025624.2-201ENSMUST00000223609 1909 ntBASIC31.81■■■□□ 2.68
Zcchc18Q8VD24 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC31.8■■■□□ 2.68
Retrieved 100 of 76,532 protein–RNA pairs in 7.2 ms