Protein–RNA interactions for Protein: A6H6A4

Lrriq4, Leucine-rich repeat and IQ domain-containing protein 4, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lrriq4A6H6A4 Gm25239-201ENSMUST00000174915 86 ntBASIC35.54■■■■□ 3.28
Lrriq4A6H6A4 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC34.93■■■■□ 3.18
Lrriq4A6H6A4 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC33.76■■■□□ 2.99
Lrriq4A6H6A4 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC33.66■■■□□ 2.98
Lrriq4A6H6A4 Psd-208ENSMUST00000224556 2034 ntBASIC32.6■■■□□ 2.81
Lrriq4A6H6A4 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC32.51■■■□□ 2.79
Lrriq4A6H6A4 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC32.2■■■□□ 2.74
Lrriq4A6H6A4 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC32.18■■■□□ 2.74
Lrriq4A6H6A4 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC32.14■■■□□ 2.74
Lrriq4A6H6A4 Gm15042-201ENSMUST00000120212 883 ntBASIC31.84■■■□□ 2.69
Lrriq4A6H6A4 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC31.79■■■□□ 2.68
Lrriq4A6H6A4 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
Lrriq4A6H6A4 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
Lrriq4A6H6A4 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC31.3■■■□□ 2.6
Lrriq4A6H6A4 Gm15045-201ENSMUST00000117359 883 ntBASIC31.26■■■□□ 2.59
Lrriq4A6H6A4 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC31.24■■■□□ 2.59
Lrriq4A6H6A4 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
Lrriq4A6H6A4 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
Lrriq4A6H6A4 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC30.84■■■□□ 2.53
Lrriq4A6H6A4 Wtip-201ENSMUST00000038537 1962 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
Lrriq4A6H6A4 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Lrriq4A6H6A4 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC30.53■■■□□ 2.48
Lrriq4A6H6A4 Rab12-201ENSMUST00000070538 2057 ntAPPRIS ALT2 TSL 1 (best) BASIC30.5■■■□□ 2.47
Lrriq4A6H6A4 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
Lrriq4A6H6A4 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC30.45■■■□□ 2.46
Lrriq4A6H6A4 Gm24109-201ENSMUST00000175489 103 ntBASIC30.43■■■□□ 2.46
Lrriq4A6H6A4 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC30.43■■■□□ 2.46
Lrriq4A6H6A4 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC30.42■■■□□ 2.46
Lrriq4A6H6A4 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC30.33■■■□□ 2.45
Lrriq4A6H6A4 Tmem259-201ENSMUST00000052885 2225 ntAPPRIS P1 TSL 1 (best) BASIC30.29■■■□□ 2.44
Lrriq4A6H6A4 Six2-201ENSMUST00000024947 1812 ntAPPRIS P1 TSL 1 (best) BASIC30.24■■■□□ 2.43
Lrriq4A6H6A4 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC30.15■■■□□ 2.42
Lrriq4A6H6A4 Poldip2-201ENSMUST00000001127 2054 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
Lrriq4A6H6A4 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC30.04■■■□□ 2.4
Lrriq4A6H6A4 Foxd3-201ENSMUST00000087285 2324 ntAPPRIS P1 BASIC30.03■■■□□ 2.4
Lrriq4A6H6A4 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC29.96■■■□□ 2.39
Lrriq4A6H6A4 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC29.92■■■□□ 2.38
Lrriq4A6H6A4 Gm12100-201ENSMUST00000150255 1933 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
Lrriq4A6H6A4 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC29.82■■■□□ 2.37
Lrriq4A6H6A4 Gm23366-201ENSMUST00000175022 89 ntBASIC29.79■■■□□ 2.36
Lrriq4A6H6A4 Gm10524-201ENSMUST00000181931 1893 ntBASIC29.63■■■□□ 2.33
Lrriq4A6H6A4 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC29.6■■■□□ 2.33
Lrriq4A6H6A4 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Lrriq4A6H6A4 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Lrriq4A6H6A4 Cdk9-201ENSMUST00000009699 1733 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
Lrriq4A6H6A4 Nfix-202ENSMUST00000099070 1728 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
Lrriq4A6H6A4 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC29.53■■■□□ 2.32
Lrriq4A6H6A4 Nfic-204ENSMUST00000117966 1655 ntTSL 1 (best) BASIC29.44■■■□□ 2.3
Lrriq4A6H6A4 Ube2ql1-201ENSMUST00000065118 2674 ntAPPRIS P1 TSL 1 (best) BASIC29.42■■■□□ 2.3
Lrriq4A6H6A4 Gm26699-201ENSMUST00000180825 2291 ntTSL 5 BASIC29.32■■■□□ 2.28
Lrriq4A6H6A4 AC153911.1-202ENSMUST00000218534 1034 ntBASIC29.28■■■□□ 2.28
Lrriq4A6H6A4 Sh3glb2-201ENSMUST00000028214 1810 ntAPPRIS P1 TSL 1 (best) BASIC29.22■■■□□ 2.27
Lrriq4A6H6A4 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC29.21■■■□□ 2.27
Lrriq4A6H6A4 Msantd2-201ENSMUST00000048604 2291 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
Lrriq4A6H6A4 Nkx3-2-201ENSMUST00000060820 1718 ntAPPRIS P1 TSL 1 (best) BASIC28.97■■■□□ 2.23
Lrriq4A6H6A4 Hoxa4-201ENSMUST00000101395 1594 ntAPPRIS P1 TSL 1 (best) BASIC28.96■■■□□ 2.23
Lrriq4A6H6A4 Sept3-202ENSMUST00000116423 2467 ntAPPRIS P1 TSL 1 (best) BASIC28.95■■■□□ 2.23
Lrriq4A6H6A4 Gm26588-201ENSMUST00000181064 2098 ntTSL 1 (best) BASIC28.92■■■□□ 2.22
Lrriq4A6H6A4 CT025624.2-201ENSMUST00000223609 1909 ntBASIC28.89■■■□□ 2.22
Lrriq4A6H6A4 Gm42596-201ENSMUST00000196305 1958 ntBASIC28.88■■■□□ 2.21
Lrriq4A6H6A4 Rab12-205ENSMUST00000167962 2010 ntAPPRIS P2 TSL 1 (best) BASIC28.87■■■□□ 2.21
Lrriq4A6H6A4 Six3-202ENSMUST00000175898 2419 ntAPPRIS P2 TSL 1 (best) BASIC28.85■■■□□ 2.21
Lrriq4A6H6A4 Tcfl5-201ENSMUST00000037877 2225 ntAPPRIS P1 TSL 1 (best) BASIC28.82■■■□□ 2.2
Lrriq4A6H6A4 Mapkapk5-201ENSMUST00000031410 2234 ntAPPRIS P2 TSL 1 (best) BASIC28.78■■■□□ 2.2
Lrriq4A6H6A4 Glt8d1-201ENSMUST00000022476 2018 ntAPPRIS P1 TSL 1 (best) BASIC28.77■■■□□ 2.2
Lrriq4A6H6A4 Epcam-201ENSMUST00000053577 2040 ntAPPRIS P1 TSL 5 BASIC28.76■■■□□ 2.19
Lrriq4A6H6A4 Ldb1-208ENSMUST00000185355 2088 ntTSL 1 (best) BASIC28.75■■■□□ 2.19
Lrriq4A6H6A4 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC28.72■■■□□ 2.19
Lrriq4A6H6A4 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.7■■■□□ 2.19
Lrriq4A6H6A4 Ccm2l-201ENSMUST00000109800 2158 ntAPPRIS P1 TSL 5 BASIC28.67■■■□□ 2.18
Lrriq4A6H6A4 Trabd-203ENSMUST00000165690 1941 ntAPPRIS P2 TSL 1 (best) BASIC28.61■■■□□ 2.17
Lrriq4A6H6A4 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC28.54■■■□□ 2.16
Lrriq4A6H6A4 Atp1b3-201ENSMUST00000034983 1994 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Lrriq4A6H6A4 Fbxo6-203ENSMUST00000105706 1938 ntAPPRIS P1 TSL 1 (best) BASIC28.47■■■□□ 2.15
Lrriq4A6H6A4 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC28.46■■■□□ 2.15
Lrriq4A6H6A4 Vsig8-201ENSMUST00000061835 1801 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Lrriq4A6H6A4 Stk24-201ENSMUST00000079817 2676 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Lrriq4A6H6A4 Fam241a-202ENSMUST00000199273 2234 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
Lrriq4A6H6A4 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC28.23■■■□□ 2.11
Lrriq4A6H6A4 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
Lrriq4A6H6A4 Rnf215-201ENSMUST00000003677 1874 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Lrriq4A6H6A4 Brsk2-203ENSMUST00000078200 2363 ntAPPRIS P4 TSL 1 (best) BASIC28.13■■■□□ 2.09
Lrriq4A6H6A4 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC28.12■■■□□ 2.09
Lrriq4A6H6A4 G6pc3-202ENSMUST00000078975 1573 ntAPPRIS P1 TSL 1 (best) BASIC28.1■■■□□ 2.09
Lrriq4A6H6A4 Ldb1-207ENSMUST00000156585 2014 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
Lrriq4A6H6A4 Gm27325-201ENSMUST00000175467 74 ntBASIC28.03■■■□□ 2.08
Lrriq4A6H6A4 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lrriq4A6H6A4 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC28.01■■■□□ 2.07
Lrriq4A6H6A4 Jdp2-203ENSMUST00000177587 1645 ntAPPRIS P1 TSL 1 (best) BASIC28■■■□□ 2.07
Lrriq4A6H6A4 Cadm4-201ENSMUST00000068023 2161 ntAPPRIS P1 TSL 1 (best) BASIC27.98■■■□□ 2.07
Lrriq4A6H6A4 Abhd17a-204ENSMUST00000191440 1529 ntTSL 1 (best) BASIC27.97■■■□□ 2.07
Lrriq4A6H6A4 Snx24-202ENSMUST00000165032 1880 ntAPPRIS P1 TSL 1 (best) BASIC27.96■■■□□ 2.07
Lrriq4A6H6A4 Wsb2-201ENSMUST00000031309 2421 ntAPPRIS P2 TSL 1 (best) BASIC27.96■■■□□ 2.07
Lrriq4A6H6A4 Samd1-201ENSMUST00000095228 2071 ntAPPRIS P1 TSL 5 BASIC27.95■■■□□ 2.07
Lrriq4A6H6A4 Chmp4b-201ENSMUST00000044277 1616 ntAPPRIS P1 TSL 1 (best) BASIC27.92■■■□□ 2.06
Lrriq4A6H6A4 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Lrriq4A6H6A4 Stard10-201ENSMUST00000032927 1400 ntAPPRIS P1 TSL 1 (best) BASIC27.89■■■□□ 2.06
Lrriq4A6H6A4 Hnrnpa0-201ENSMUST00000007980 2678 ntAPPRIS P1 BASIC27.83■■■□□ 2.05
Lrriq4A6H6A4 Gm25238-201ENSMUST00000174914 89 ntBASIC27.8■■■□□ 2.04
Lrriq4A6H6A4 Nt5dc2-204ENSMUST00000227096 1848 ntAPPRIS P5 BASIC27.78■■■□□ 2.04
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms