RNA–Protein interactions for RNA: YOR362C

PRE10, Transcript of Alpha 7 subunit of the 20S proteasome, yeastyeast

Gene PRE10, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE10YOR362C SAP155P43612 1002 aa9.76□□□□□ -0.85
PRE10YOR362C YJL181WP46987 611 aa9.76□□□□□ -0.85
PRE10YOR362C ZDS1P50111 915 aaKnown RBP9.76□□□□□ -0.85
PRE10YOR362C ADE16P54113 591 aaKnown RBP9.76□□□□□ -0.85
PRE10YOR362C FOX2Q02207 900 aaKnown RBP9.76□□□□□ -0.85
PRE10YOR362C FRK1Q03002 865 aaPredicted RBP9.76□□□□□ -0.85
PRE10YOR362C YRF1-3P0CX14 1859 aa9.76□□□□□ -0.85
PRE10YOR362C YRF1-7P0CX15 1859 aa9.76□□□□□ -0.85
PRE10YOR362C YRF1-6P53819 1859 aa9.76□□□□□ -0.85
PRE10YOR362C EDE1P34216 1381 aa9.75□□□□□ -0.85
PRE10YOR362C KCC4P25389 1037 aa9.75□□□□□ -0.85
PRE10YOR362C COBP00163 385 aa9.74□□□□□ -0.85
PRE10YOR362C SUI2P20459 304 aaKnown RBP9.74□□□□□ -0.85
PRE10YOR362C UBP1P25037 809 aa9.74□□□□□ -0.85
PRE10YOR362C UGA3P26370 528 aa9.74□□□□□ -0.85
PRE10YOR362C PRP40P33203 583 aaKnown RBP9.74□□□□□ -0.85
PRE10YOR362C NSE3Q05541 303 aa9.74□□□□□ -0.85
PRE10YOR362C RVB2Q12464 471 aaKnown RBP9.74□□□□□ -0.85
PRE10YOR362C NUP145P49687 1317 aa9.74□□□□□ -0.85
PRE10YOR362C OSM1P21375 501 aaKnown RBP9.73□□□□□ -0.85
PRE10YOR362C YFR016CP43597 1233 aaKnown RBP9.73□□□□□ -0.85
PRE10YOR362C RTT109Q07794 436 aa9.73□□□□□ -0.85
PRE10YOR362C RPN11P43588 306 aaKnown RBP9.72□□□□□ -0.85
PRE10YOR362C GYP7P48365 746 aa9.72□□□□□ -0.85
PRE10YOR362C YBP2P53169 641 aa9.72□□□□□ -0.85
PRE10YOR362C RRT14P40470 206 aa9.71□□□□□ -0.86
PRE10YOR362C HEF3P53978 1044 aaKnown RBP9.71□□□□□ -0.86
PRE10YOR362C YKR075CP36155 307 aa9.69□□□□□ -0.86
PRE10YOR362C MAK21Q12176 1025 aaKnown RBP9.69□□□□□ -0.86
PRE10YOR362C GRX1P25373 110 aaKnown RBP9.68□□□□□ -0.86
PRE10YOR362C BMS1Q08965 1183 aaKnown RBP9.68□□□□□ -0.86
PRE10YOR362C LYS2P07702 1392 aa9.67□□□□□ -0.86
PRE10YOR362C RMT2Q03305 412 aa9.67□□□□□ -0.86
PRE10YOR362C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.67□□□□□ -0.86not detected
PRE10YOR362C YBR287WP38355 427 aa9.66□□□□□ -0.86
PRE10YOR362C RAD2P07276 1031 aa9.65□□□□□ -0.86
PRE10YOR362C BUD31P25337 157 aaPredicted RBP9.65□□□□□ -0.86
PRE10YOR362C ALE1Q08548 619 aa9.65□□□□□ -0.86
PRE10YOR362C ISW2Q08773 1120 aa9.65□□□□□ -0.86
PRE10YOR362C COQ4O13525 335 aa9.64□□□□□ -0.87
PRE10YOR362C MSB4Q12317 492 aa9.64□□□□□ -0.87
PRE10YOR362C BUD27P43573 796 aaKnown RBP RIP-Chip data9.63□□□□□ -0.87not detected
PRE10YOR362C MDG1P53885 366 aa9.63□□□□□ -0.87
PRE10YOR362C SRT1Q03175 343 aa9.63□□□□□ -0.87
PRE10YOR362C NPR2P39923 615 aa9.62□□□□□ -0.87
PRE10YOR362C NOP53Q12080 455 aaKnown RBP9.62□□□□□ -0.87
PRE10YOR362C RAD4P14736 754 aa9.61□□□□□ -0.87
PRE10YOR362C YOL057WQ08225 711 aa9.61□□□□□ -0.87
PRE10YOR362C FPR3P38911 411 aaKnown RBP9.6□□□□□ -0.87
PRE10YOR362C SSP2Q08646 371 aa9.6□□□□□ -0.87
PRE10YOR362C DAL5P15365 543 aa9.59□□□□□ -0.87
PRE10YOR362C TUM1Q08686 304 aaKnown RBP9.59□□□□□ -0.87
PRE10YOR362C TFA1P36100 482 aa9.58□□□□□ -0.88
PRE10YOR362C FUN12P39730 1002 aaKnown RBP9.58□□□□□ -0.88
PRE10YOR362C YIL092WP40497 633 aa9.58□□□□□ -0.88
PRE10YOR362C NOP8Q08287 484 aaPredicted RBP9.58□□□□□ -0.88
PRE10YOR362C GRE2Q12068 342 aaKnown RBP9.58□□□□□ -0.88
PRE10YOR362C RIM15P43565 1770 aa9.58□□□□□ -0.88
PRE10YOR362C GTT3P39996 337 aa9.57□□□□□ -0.88
PRE10YOR362C ALD2P47771 506 aa9.57□□□□□ -0.88
PRE10YOR362C DNM1P54861 757 aa9.57□□□□□ -0.88
PRE10YOR362C PHM7Q12252 991 aa9.57□□□□□ -0.88
PRE10YOR362C YPP1P46951 817 aa9.56□□□□□ -0.88
PRE10YOR362C LYS4P49367 693 aaPredicted RBP9.56□□□□□ -0.88
PRE10YOR362C BUG1Q12191 341 aa9.56□□□□□ -0.88
PRE10YOR362C MRP7P12687 371 aa9.55□□□□□ -0.88
PRE10YOR362C BDF1P35817 686 aa9.55□□□□□ -0.88
PRE10YOR362C UGA2P38067 497 aa9.54□□□□□ -0.88
PRE10YOR362C CST6P40535 587 aa9.54□□□□□ -0.88
PRE10YOR362C TEA1P47988 759 aa9.54□□□□□ -0.88
PRE10YOR362C SER1P33330 395 aaKnown RBP9.53□□□□□ -0.88
PRE10YOR362C ALD3P54114 506 aa9.53□□□□□ -0.88
PRE10YOR362C ZDS2P54786 942 aa9.53□□□□□ -0.88
PRE10YOR362C VPS64Q03944 604 aa9.53□□□□□ -0.88
PRE10YOR362C YDR306CQ06640 478 aa9.53□□□□□ -0.88
PRE10YOR362C YBL086CP38177 466 aa9.52□□□□□ -0.89
PRE10YOR362C RPG1P38249 964 aaKnown RBP9.52□□□□□ -0.89
PRE10YOR362C UTP22P53254 1237 aaPredicted RBP9.52□□□□□ -0.89
PRE10YOR362C SSA2P10592 639 aaKnown RBP9.51□□□□□ -0.89
PRE10YOR362C CSI1Q04368 295 aa9.51□□□□□ -0.89
PRE10YOR362C NYV1Q12255 253 aa9.51□□□□□ -0.89
PRE10YOR362C RPS19AP07280 144 aaKnown RBP9.5□□□□□ -0.89
PRE10YOR362C RPS19BP07281 144 aaPredicted RBP9.5□□□□□ -0.89
PRE10YOR362C NUP133P36161 1157 aa9.5□□□□□ -0.89
PRE10YOR362C YGL082WP53155 381 aa9.5□□□□□ -0.89
PRE10YOR362C TRP5P00931 707 aaKnown RBP9.49□□□□□ -0.89
PRE10YOR362C APL2P36000 726 aaPredicted RBP9.49□□□□□ -0.89
PRE10YOR362C YJR008WP47085 338 aa9.49□□□□□ -0.89
PRE10YOR362C PKH1Q03407 766 aa9.49□□□□□ -0.89
PRE10YOR362C POL32P47110 350 aa9.48□□□□□ -0.89
PRE10YOR362C CTH1P47976 325 aa9.48□□□□□ -0.89
PRE10YOR362C PUF6Q04373 656 aaKnown RBP9.48□□□□□ -0.89
PRE10YOR362C YLR271WQ06152 274 aa9.48□□□□□ -0.89
PRE10YOR362C YPR204WQ08995 1032 aa9.48□□□□□ -0.89
PRE10YOR362C SWI1P09547 1314 aa9.48□□□□□ -0.89
PRE10YOR362C RAD24P32641 659 aa9.47□□□□□ -0.89
PRE10YOR362C YNG2P38806 282 aaKnown RBP9.47□□□□□ -0.89
PRE10YOR362C HPC2Q01448 625 aa9.47□□□□□ -0.89
PRE10YOR362C SUP35P05453 685 aaKnown RBP9.46□□□□□ -0.9
PRE10YOR362C LPD1P09624 499 aaKnown RBP9.46□□□□□ -0.9
Retrieved 100 of 5,963 RNA–protein pairs in 33.1 ms