RNA–Protein interactions for RNA: YOR142W

LSC1, Transcript of Alpha subunit of succinyl-CoA ligase, yeastyeast

Gene LSC1, Length 990 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC1YOR142W BUB1P41695 1021 aaKnown RBP RIP-Chip data8.78□□□□□ -1not detected
LSC1YOR142W INP54Q08227 384 aaKnown RBP8.77□□□□□ -1.01
LSC1YOR142W PSD2P53037 1138 aaKnown RBP8.75□□□□□ -1.01
LSC1YOR142W SSA2P10592 639 aaKnown RBP8.74□□□□□ -1.01
LSC1YOR142W GTT3P39996 337 aa8.74□□□□□ -1.01
LSC1YOR142W ALD2P47771 506 aa8.74□□□□□ -1.01
LSC1YOR142W NUP145P49687 1317 aa8.74□□□□□ -1.01
LSC1YOR142W OSM1P21375 501 aaKnown RBP8.73□□□□□ -1.01
LSC1YOR142W HSP104P31539 908 aaKnown RBP8.73□□□□□ -1.01
LSC1YOR142W UGA2P38067 497 aa8.73□□□□□ -1.01
LSC1YOR142W DSD1P53095 428 aa8.73□□□□□ -1.01
LSC1YOR142W ATG13Q06628 738 aa8.73□□□□□ -1.01
LSC1YOR142W UTP10P42945 1769 aaKnown RBP8.73□□□□□ -1.01
LSC1YOR142W RRP46P53256 223 aaPredicted RBP8.72□□□□□ -1.01
LSC1YOR142W PAP2P53632 584 aaKnown RBP8.72□□□□□ -1.01
LSC1YOR142W MRPL32P25348 183 aa8.71□□□□□ -1.02
LSC1YOR142W AKL1P38080 1108 aaKnown RBP8.71□□□□□ -1.02
LSC1YOR142W BDF1P35817 686 aa8.68□□□□□ -1.02
LSC1YOR142W MSB4Q12317 492 aa8.68□□□□□ -1.02
LSC1YOR142W TUM1Q08686 304 aaKnown RBP8.67□□□□□ -1.02
LSC1YOR142W SPT7P35177 1332 aa8.66□□□□□ -1.02
LSC1YOR142W GRX1P25373 110 aaKnown RBP8.66□□□□□ -1.02
LSC1YOR142W YBP2P53169 641 aa8.66□□□□□ -1.02
LSC1YOR142W CTF4Q01454 927 aa8.66□□□□□ -1.02
LSC1YOR142W GRE2Q12068 342 aaKnown RBP8.66□□□□□ -1.02
LSC1YOR142W RAD4P14736 754 aa8.65□□□□□ -1.02
LSC1YOR142W NTH2P35172 780 aa8.64□□□□□ -1.03
LSC1YOR142W AOS1Q06624 347 aa8.63□□□□□ -1.03
LSC1YOR142W BUG1Q12191 341 aa8.63□□□□□ -1.03
LSC1YOR142W TOS1P38288 455 aa8.62□□□□□ -1.03
LSC1YOR142W KCC4P25389 1037 aa8.61□□□□□ -1.03
LSC1YOR142W ALD3P54114 506 aa8.61□□□□□ -1.03
LSC1YOR142W ALE1Q08548 619 aa8.61□□□□□ -1.03
LSC1YOR142W SPT21P35209 758 aa8.59□□□□□ -1.03
LSC1YOR142W RTR1P40084 226 aaPredicted RBP8.59□□□□□ -1.03
LSC1YOR142W UTP22P53254 1237 aaPredicted RBP8.59□□□□□ -1.03
LSC1YOR142W RMT2Q03305 412 aa8.59□□□□□ -1.03
LSC1YOR142W PRD1P25375 712 aa8.58□□□□□ -1.04
LSC1YOR142W RIX7Q07844 837 aaKnown RBP8.58□□□□□ -1.04
LSC1YOR142W PMD1P32634 1753 aa8.58□□□□□ -1.04
LSC1YOR142W EAF6P47128 113 aa8.57□□□□□ -1.04
LSC1YOR142W NYV1Q12255 253 aa8.57□□□□□ -1.04
LSC1YOR142W YNL050CP53952 270 aa8.56□□□□□ -1.04
LSC1YOR142W IOC4Q04213 475 aa8.56□□□□□ -1.04
LSC1YOR142W NOP53Q12080 455 aaKnown RBP8.56□□□□□ -1.04
LSC1YOR142W BUD27P43573 796 aaKnown RBP RIP-Chip data8.55□□□□□ -1.04not detected
LSC1YOR142W MPP10P47083 593 aaKnown RBP8.55□□□□□ -1.04
LSC1YOR142W TEA1P47988 759 aa8.55□□□□□ -1.04
LSC1YOR142W THI22Q06490 572 aa8.55□□□□□ -1.04
LSC1YOR142W SSA1P10591 642 aaKnown RBP8.54□□□□□ -1.04
LSC1YOR142W UGA3P26370 528 aa8.54□□□□□ -1.04
LSC1YOR142W HPC2Q01448 625 aa8.54□□□□□ -1.04
LSC1YOR142W RTT109Q07794 436 aa8.53□□□□□ -1.04
LSC1YOR142W LYS2P07702 1392 aa8.52□□□□□ -1.05
LSC1YOR142W CTI6Q08923 506 aa8.52□□□□□ -1.05
LSC1YOR142W PHM7Q12252 991 aa8.52□□□□□ -1.05
LSC1YOR142W ARG8P18544 423 aa8.51□□□□□ -1.05
LSC1YOR142W SER1P33330 395 aaKnown RBP8.51□□□□□ -1.05
LSC1YOR142W SAP155P43612 1002 aa8.51□□□□□ -1.05
LSC1YOR142W MSN5P52918 1224 aa8.51□□□□□ -1.05
LSC1YOR142W NSE3Q05541 303 aa8.51□□□□□ -1.05
LSC1YOR142W COQ4O13525 335 aa8.5□□□□□ -1.05
LSC1YOR142W TFA1P36100 482 aa8.5□□□□□ -1.05
LSC1YOR142W ZDS1P50111 915 aaKnown RBP8.5□□□□□ -1.05
LSC1YOR142W YGL082WP53155 381 aa8.5□□□□□ -1.05
LSC1YOR142W MDG1P53885 366 aa8.5□□□□□ -1.05
LSC1YOR142W HEF3P53978 1044 aaKnown RBP8.5□□□□□ -1.05
LSC1YOR142W ZDS2P54786 942 aa8.5□□□□□ -1.05
LSC1YOR142W YDL144CQ07589 356 aa8.5□□□□□ -1.05
LSC1YOR142W DCD1P06773 312 aa8.49□□□□□ -1.05
LSC1YOR142W APL2P36000 726 aaPredicted RBP8.49□□□□□ -1.05
LSC1YOR142W YBR287WP38355 427 aa8.49□□□□□ -1.05
LSC1YOR142W KIN4Q01919 800 aa8.49□□□□□ -1.05
LSC1YOR142W SSP2Q08646 371 aa8.49□□□□□ -1.05
LSC1YOR142W BMS1Q08965 1183 aaKnown RBP8.49□□□□□ -1.05
LSC1YOR142W ERT1P38140 529 aa8.48□□□□□ -1.05
LSC1YOR142W RRT14P40470 206 aa8.48□□□□□ -1.05
LSC1YOR142W YFR016CP43597 1233 aaKnown RBP8.48□□□□□ -1.05
LSC1YOR142W LPD1P09624 499 aaKnown RBP8.47□□□□□ -1.05
LSC1YOR142W TPD3P31383 635 aa8.47□□□□□ -1.05
LSC1YOR142W MAM1P40065 302 aa8.47□□□□□ -1.05
LSC1YOR142W YPR204WQ08995 1032 aa8.47□□□□□ -1.05
LSC1YOR142W CWH41P53008 833 aa8.46□□□□□ -1.06
LSC1YOR142W CTT1P06115 562 aa8.45□□□□□ -1.06
LSC1YOR142W YKR023WP36119 530 aaKnown RBP8.45□□□□□ -1.06
LSC1YOR142W GYP7P48365 746 aa8.45□□□□□ -1.06
LSC1YOR142W FAS2P19097 1887 aaKnown RBP8.45□□□□□ -1.06
LSC1YOR142W SMY1P32364 656 aaKnown RBP8.44□□□□□ -1.06
LSC1YOR142W YKL222CP35995 705 aa8.44□□□□□ -1.06
LSC1YOR142W YER156CP40093 338 aaKnown RBP8.44□□□□□ -1.06
LSC1YOR142W RAT1Q02792 1006 aaKnown RBP8.44□□□□□ -1.06
LSC1YOR142W VPS64Q03944 604 aa8.44□□□□□ -1.06
LSC1YOR142W HKR1P41809 1802 aa8.44□□□□□ -1.06
LSC1YOR142W SUI2P20459 304 aaKnown RBP8.43□□□□□ -1.06
LSC1YOR142W CDC27P38042 758 aa8.43□□□□□ -1.06
LSC1YOR142W PFF1P38244 976 aa8.43□□□□□ -1.06
LSC1YOR142W YOL057WQ08225 711 aa8.43□□□□□ -1.06
LSC1YOR142W CAF20P12962 161 aaKnown RBP8.42□□□□□ -1.06
LSC1YOR142W SRT1Q03175 343 aa8.42□□□□□ -1.06
LSC1YOR142W BDF2Q07442 638 aa8.41□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms