RNA–Protein interactions for RNA: YOR108W

LEU9, Transcript of Alpha-isopropylmalate synthase II (2-isopropylmalate synthase), yeastyeast

Gene LEU9, Length 1,815 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LEU9YOR108W IES2P40154 320 aa11.67□□□□□ -0.54
LEU9YOR108W SIR4P11978 1358 aa11.67□□□□□ -0.54
LEU9YOR108W BUD27P43573 796 aaKnown RBP RIP-Chip data11.67□□□□□ -0.54not detected
LEU9YOR108W BMS1Q08965 1183 aaKnown RBP11.66□□□□□ -0.54
LEU9YOR108W YAH1Q12184 172 aaKnown RBP11.66□□□□□ -0.54
LEU9YOR108W SRT1Q03175 343 aa11.64□□□□□ -0.55
LEU9YOR108W COQ4O13525 335 aa11.63□□□□□ -0.55
LEU9YOR108W NSE3Q05541 303 aa11.63□□□□□ -0.55
LEU9YOR108W INP54Q08227 384 aaKnown RBP11.63□□□□□ -0.55
LEU9YOR108W KCC4P25389 1037 aa11.63□□□□□ -0.55
LEU9YOR108W YKL133CP36066 463 aa11.62□□□□□ -0.55
LEU9YOR108W POL32P47110 350 aa11.62□□□□□ -0.55
LEU9YOR108W MEC3Q02574 474 aa11.62□□□□□ -0.55
LEU9YOR108W UGA3P26370 528 aa11.61□□□□□ -0.55
LEU9YOR108W ADE16P54113 591 aaKnown RBP11.61□□□□□ -0.55
LEU9YOR108W IMH1Q06704 911 aaKnown RBP11.61□□□□□ -0.55
LEU9YOR108W NUP145P49687 1317 aa11.61□□□□□ -0.55
LEU9YOR108W PUF6Q04373 656 aaKnown RBP11.6□□□□□ -0.55
LEU9YOR108W RPC31P17890 251 aa11.58□□□□□ -0.56
LEU9YOR108W FRK1Q03002 865 aaPredicted RBP11.58□□□□□ -0.56
LEU9YOR108W EDE1P34216 1381 aa11.58□□□□□ -0.56
LEU9YOR108W TRP5P00931 707 aaKnown RBP11.58□□□□□ -0.56
LEU9YOR108W OSM1P21375 501 aaKnown RBP11.58□□□□□ -0.56
LEU9YOR108W ATG13Q06628 738 aa11.58□□□□□ -0.56
LEU9YOR108W ALE1Q08548 619 aa11.58□□□□□ -0.56
LEU9YOR108W RAD4P14736 754 aa11.56□□□□□ -0.56
LEU9YOR108W CSI1Q04368 295 aa11.55□□□□□ -0.56
LEU9YOR108W YPP1P46951 817 aa11.54□□□□□ -0.56
LEU9YOR108W NOP8Q08287 484 aaPredicted RBP11.54□□□□□ -0.56
LEU9YOR108W YOL057WQ08225 711 aa11.53□□□□□ -0.56
LEU9YOR108W YFR016CP43597 1233 aaKnown RBP11.53□□□□□ -0.56
LEU9YOR108W YBP2P53169 641 aa11.53□□□□□ -0.56
LEU9YOR108W ZDS2P54786 942 aa11.52□□□□□ -0.57
LEU9YOR108W YRF1-3P0CX14 1859 aa11.52□□□□□ -0.57
LEU9YOR108W YRF1-7P0CX15 1859 aa11.52□□□□□ -0.57
LEU9YOR108W YRF1-6P53819 1859 aa11.52□□□□□ -0.57
LEU9YOR108W YNG2P38806 282 aaKnown RBP11.51□□□□□ -0.57
LEU9YOR108W YGR122WP53272 402 aa11.51□□□□□ -0.57
LEU9YOR108W COBP00163 385 aa11.51□□□□□ -0.57
LEU9YOR108W DOT5P40553 215 aa11.51□□□□□ -0.57
LEU9YOR108W ROM2P51862 1356 aaKnown RBP11.5□□□□□ -0.57
LEU9YOR108W RAD24P32641 659 aa11.49□□□□□ -0.57
LEU9YOR108W LYS2P07702 1392 aa11.49□□□□□ -0.57
LEU9YOR108W MRP7P12687 371 aa11.49□□□□□ -0.57
LEU9YOR108W SPO1P53541 631 aa11.49□□□□□ -0.57
LEU9YOR108W FOX2Q02207 900 aaKnown RBP11.49□□□□□ -0.57
LEU9YOR108W RMT2Q03305 412 aa11.49□□□□□ -0.57
LEU9YOR108W ILV3P39522 585 aaKnown RBP11.48□□□□□ -0.57
LEU9YOR108W YIL055CP40523 627 aaKnown RBP11.48□□□□□ -0.57
LEU9YOR108W RPS19AP07280 144 aaKnown RBP11.46□□□□□ -0.57
LEU9YOR108W RPS19BP07281 144 aaPredicted RBP11.46□□□□□ -0.57
LEU9YOR108W SWC3P31376 625 aa11.46□□□□□ -0.57
LEU9YOR108W VPS64Q03944 604 aa11.46□□□□□ -0.58
LEU9YOR108W NUP133P36161 1157 aa11.44□□□□□ -0.58
LEU9YOR108W DNM1P54861 757 aa11.44□□□□□ -0.58
LEU9YOR108W YDR306CQ06640 478 aa11.44□□□□□ -0.58
LEU9YOR108W TUM1Q08686 304 aaKnown RBP11.44□□□□□ -0.58
LEU9YOR108W NOP53Q12080 455 aaKnown RBP11.44□□□□□ -0.58
LEU9YOR108W LAM6Q08001 693 aa11.43□□□□□ -0.58
LEU9YOR108W YKR075CP36155 307 aa11.42□□□□□ -0.58
LEU9YOR108W NMD2P38798 1089 aaKnown RBP11.42□□□□□ -0.58
LEU9YOR108W CST6P40535 587 aa11.42□□□□□ -0.58
LEU9YOR108W APL2P36000 726 aaPredicted RBP11.41□□□□□ -0.58
LEU9YOR108W GRX1P25373 110 aaKnown RBP11.4□□□□□ -0.58
LEU9YOR108W BOI2P39969 1040 aa11.4□□□□□ -0.58
LEU9YOR108W YJL181WP46987 611 aa11.4□□□□□ -0.58
LEU9YOR108W SSP2Q08646 371 aa11.4□□□□□ -0.58
LEU9YOR108W RPN11P43588 306 aaKnown RBP11.39□□□□□ -0.59
LEU9YOR108W SWI1P09547 1314 aa11.39□□□□□ -0.59
LEU9YOR108W RFC1P38630 861 aaKnown RBP11.39□□□□□ -0.59
LEU9YOR108W PRP40P33203 583 aaKnown RBP11.38□□□□□ -0.59
LEU9YOR108W ECM16Q04217 1267 aaKnown RBP11.37□□□□□ -0.59
LEU9YOR108W NKP2Q06162 153 aa11.37□□□□□ -0.59
LEU9YOR108W PKH1Q03407 766 aa11.36□□□□□ -0.59
LEU9YOR108W LPD1P09624 499 aaKnown RBP11.35□□□□□ -0.59
LEU9YOR108W GCD7P32502 381 aaPredicted RBP11.35□□□□□ -0.59
LEU9YOR108W BDP1P46678 594 aa11.35□□□□□ -0.59
LEU9YOR108W YGL082WP53155 381 aa11.35□□□□□ -0.59
LEU9YOR108W YPR204WQ08995 1032 aa11.35□□□□□ -0.59
LEU9YOR108W UBP12P39538 1254 aa11.34□□□□□ -0.59
LEU9YOR108W TEA1P47988 759 aa11.34□□□□□ -0.59
LEU9YOR108W MDG1P53885 366 aa11.34□□□□□ -0.59
LEU9YOR108W PHM7Q12252 991 aa11.34□□□□□ -0.59
LEU9YOR108W SER1P33330 395 aaKnown RBP11.33□□□□□ -0.6
LEU9YOR108W YJR008WP47085 338 aa11.33□□□□□ -0.6
LEU9YOR108W MSB4Q12317 492 aa11.33□□□□□ -0.6
LEU9YOR108W ARG8P18544 423 aa11.32□□□□□ -0.6
LEU9YOR108W DCD1P06773 312 aa11.3□□□□□ -0.6
LEU9YOR108W HGH1P48362 394 aaKnown RBP11.3□□□□□ -0.6
LEU9YOR108W YMR074CQ04773 145 aa11.3□□□□□ -0.6
LEU9YOR108W YLR271WQ06152 274 aa11.3□□□□□ -0.6
LEU9YOR108W GRE2Q12068 342 aaKnown RBP11.3□□□□□ -0.6
LEU9YOR108W NPR2P39923 615 aa11.3□□□□□ -0.6
LEU9YOR108W FCP1Q03254 732 aa11.3□□□□□ -0.6
LEU9YOR108W RAD50P12753 1312 aa11.29□□□□□ -0.6
LEU9YOR108W RIM15P43565 1770 aa11.29□□□□□ -0.6
LEU9YOR108W NCB2Q92317 146 aa11.29□□□□□ -0.6
LEU9YOR108W ITC1P53125 1264 aa11.28□□□□□ -0.6
LEU9YOR108W PSH1Q12161 406 aa11.28□□□□□ -0.6
LEU9YOR108W OPY1P38271 328 aa11.28□□□□□ -0.6
Retrieved 100 of 5,963 RNA–protein pairs in 16.9 ms