RNA–Protein interactions for RNA: YOL145C

CTR9, Transcript of Component of the Paf1p complex involved in transcription elongation, yeast

Gene CTR9, Length 3,234 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CTR9	YOL145C	NPL4	P33755	580 aa		2.71	□□□□□ -1.98
CTR9	YOL145C	ACS2	P52910	683 aa	Known RBP	2.71	□□□□□ -1.98
CTR9	YOL145C	CWC15	Q03772	175 aa	Known RBP	2.71	□□□□□ -1.98
CTR9	YOL145C	YPR097W	Q06839	1073 aa		2.71	□□□□□ -1.98
CTR9	YOL145C	YEL077C	Q3E7X8	1277 aa		2.71	□□□□□ -1.98
CTR9	YOL145C	TEC1	P18412	486 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	PAM1	P37304	830 aa	Known RBP	2.7	□□□□□ -1.98
CTR9	YOL145C	UBP9	P39967	754 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	RPA14	P50106	137 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	ROM1	P53046	1155 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	TRL1	P09880	827 aa	Known RBP	2.7	□□□□□ -1.98
CTR9	YOL145C	SAP30	P38429	201 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	SOH1	P38633	127 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	HAL5	P38970	855 aa	Known RBP	2.7	□□□□□ -1.98
CTR9	YOL145C	BOL3	P39724	118 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	MDJ2	P42834	146 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	NCR1	Q12200	1170 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	ARH1	P48360	493 aa		2.7	□□□□□ -1.98
CTR9	YOL145C	ATE1	P16639	503 aa		2.69	□□□□□ -1.98
CTR9	YOL145C	HEM3	P28789	327 aa		2.69	□□□□□ -1.98
CTR9	YOL145C	RRN7	P40992	514 aa		2.69	□□□□□ -1.98
CTR9	YOL145C	ALD2	P47771	506 aa		2.69	□□□□□ -1.98
CTR9	YOL145C	STE20	Q03497	939 aa	Known RBP	2.69	□□□□□ -1.98
CTR9	YOL145C	WHI5	Q12416	295 aa		2.69	□□□□□ -1.98
CTR9	YOL145C	GRS1	P38088	690 aa	Known RBP	2.68	□□□□□ -1.98
CTR9	YOL145C	KAR5	Q04746	504 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	RRP15	Q06511	250 aa	Predicted RBP	2.68	□□□□□ -1.98
CTR9	YOL145C	PDI1	P17967	522 aa	Known RBP	2.68	□□□□□ -1.98
CTR9	YOL145C	GUT2	P32191	649 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	YHL050C	P38721	697 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	YHR219W	P38900	624 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	ALR1	Q08269	859 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	PHO87	P25360	923 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	PNP1	Q05788	311 aa		2.68	□□□□□ -1.98
CTR9	YOL145C	IXR1	P33417	597 aa		2.67	□□□□□ -1.98
CTR9	YOL145C	SNU71	P53207	620 aa	Known RBP	2.67	□□□□□ -1.98
CTR9	YOL145C	BNI4	P53858	892 aa		2.67	□□□□□ -1.98
CTR9	YOL145C	STM1	P39015	273 aa	Known RBP	2.67	□□□□□ -1.98
CTR9	YOL145C	FKH1	P40466	484 aa		2.67	□□□□□ -1.98
CTR9	YOL145C	HXT10	P43581	546 aa		2.67	□□□□□ -1.98
CTR9	YOL145C	ELP4	Q02884	456 aa	Known RBP	2.67	□□□□□ -1.98
CTR9	YOL145C	PUF6	Q04373	656 aa	Known RBP	2.67	□□□□□ -1.98
CTR9	YOL145C	MSC6	Q08818	692 aa	Known RBP	2.67	□□□□□ -1.98
CTR9	YOL145C	CBC2	Q08920	208 aa	Known RBP RIP-Chip data	2.67	□□□□□ -1.98	not detected
CTR9	YOL145C	VAC17	P25591	423 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	SUV3	P32580	737 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	TFG1	P41895	735 aa	Predicted RBP	2.66	□□□□□ -1.98
CTR9	YOL145C	FRT1	Q99332	602 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	PRT1	P06103	763 aa	Known RBP	2.66	□□□□□ -1.98
CTR9	YOL145C	MOD5	P07884	428 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	BOI1	P38041	980 aa	Known RBP	2.66	□□□□□ -1.98
CTR9	YOL145C	NOP7	P53261	605 aa	Known RBP	2.66	□□□□□ -1.98
CTR9	YOL145C	ISR1	Q06098	443 aa	Known RBP	2.66	□□□□□ -1.98
CTR9	YOL145C	TSC13	Q99190	310 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	MIP1	P15801	1254 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	MET10	P39692	1035 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	PUN1	Q06991	263 aa		2.66	□□□□□ -1.98
CTR9	YOL145C	RRD1	P40454	393 aa	Known RBP	2.65	□□□□□ -1.98
CTR9	YOL145C	KXD1	P53158	218 aa		2.65	□□□□□ -1.98
CTR9	YOL145C	HDA3	Q06623	655 aa		2.65	□□□□□ -1.98
CTR9	YOL145C	HAP4	P14064	554 aa		2.65	□□□□□ -1.99
CTR9	YOL145C	NUT2	Q06213	157 aa		2.65	□□□□□ -1.99
CTR9	YOL145C	GLO3	P38682	493 aa	Known RBP	2.64	□□□□□ -1.99
CTR9	YOL145C	POL32	P47110	350 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	GAS4	Q08271	471 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	PTC2	P39966	464 aa	Known RBP	2.64	□□□□□ -1.99
CTR9	YOL145C	QDR1	P40475	563 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	ALD4	P46367	519 aa	Known RBP	2.64	□□□□□ -1.99
CTR9	YOL145C	ATG1	P53104	897 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	UTP13	Q05946	817 aa	Known RBP	2.64	□□□□□ -1.99
CTR9	YOL145C	STB3	Q12427	513 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	AIR2	Q12476	344 aa	Known RBP	2.64	□□□□□ -1.99
CTR9	YOL145C	SRS2	P12954	1174 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	SEC20	P28791	383 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	SPT23	P35210	1082 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	AIM9	P40053	627 aa	Known RBP	2.64	□□□□□ -1.99
CTR9	YOL145C	APP1	P53933	587 aa		2.64	□□□□□ -1.99
CTR9	YOL145C	MET4	P32389	672 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	THI12	P42883	340 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	THI5	P43534	340 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	THI11	P47183	340 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	PUS5	Q06244	254 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	THI13	Q07748	340 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	SDH2	P21801	266 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	TPD3	P31383	635 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	SEC8	P32855	1065 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	ATG3	P40344	310 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	OYE2	Q03558	400 aa	Known RBP	2.63	□□□□□ -1.99
CTR9	YOL145C	ATG20	Q07528	640 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	GPI13	Q07830	1017 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	VAN1	P23642	535 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	NTH2	P35172	780 aa		2.63	□□□□□ -1.99
CTR9	YOL145C	YML082W	Q04533	649 aa	Known RBP	2.63	□□□□□ -1.99
CTR9	YOL145C	FUR4	P05316	633 aa	Known RBP	2.62	□□□□□ -1.99
CTR9	YOL145C	RPB10	P22139	70 aa		2.62	□□□□□ -1.99
CTR9	YOL145C	KTR2	P33550	425 aa		2.62	□□□□□ -1.99
CTR9	YOL145C	PPX1	P38698	397 aa		2.62	□□□□□ -1.99
CTR9	YOL145C	FYV10	P40492	516 aa		2.62	□□□□□ -1.99
CTR9	YOL145C	SWI5	P08153	709 aa		2.61	□□□□□ -1.99
CTR9	YOL145C	SIS1	P25294	352 aa	Known RBP	2.61	□□□□□ -1.99

Retrieved 100 of 5,963 RNA–protein pairs in 41.3 ms