RNA–Protein interactions for RNA: YOL054W

PSH1, Transcript of E3 ubiquitin ligase targeting centromere-binding protein Cse4p, yeast

Gene PSH1, Length 1,221 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PSH1	YOL054W	MLP2	P40457	1679 aa		7.83	□□□□□ -1.16
PSH1	YOL054W	YJU3	P28321	313 aa		7.83	□□□□□ -1.16
PSH1	YOL054W	STH1	P32597	1359 aa		7.83	□□□□□ -1.16
PSH1	YOL054W	SLY41	P22215	453 aa		7.81	□□□□□ -1.16
PSH1	YOL054W	YRR1	Q12172	810 aa		7.81	□□□□□ -1.16
PSH1	YOL054W	TY2B-B	Q12491	1770 aa		7.81	□□□□□ -1.16
PSH1	YOL054W	CPS1	P27614	576 aa		7.8	□□□□□ -1.16
PSH1	YOL054W	SPT5	P27692	1063 aa	Known RBP	7.8	□□□□□ -1.16
PSH1	YOL054W	YML020W	Q03722	664 aa		7.8	□□□□□ -1.16
PSH1	YOL054W	LAM6	Q08001	693 aa		7.8	□□□□□ -1.16
PSH1	YOL054W	SLX8	P40072	274 aa		7.79	□□□□□ -1.16
PSH1	YOL054W	LTE1	P07866	1435 aa		7.78	□□□□□ -1.16
PSH1	YOL054W	MET5	P47169	1442 aa		7.78	□□□□□ -1.16
PSH1	YOL054W	RTF1	P53064	558 aa		7.78	□□□□□ -1.16
PSH1	YOL054W	RPL34A	P87262	121 aa	Predicted RBP	7.78	□□□□□ -1.16
PSH1	YOL054W	TTI1	P36097	1038 aa		7.77	□□□□□ -1.17
PSH1	YOL054W	YNL115C	P53925	644 aa		7.77	□□□□□ -1.17
PSH1	YOL054W	YEL077C	Q3E7X8	1277 aa		7.77	□□□□□ -1.17
PSH1	YOL054W	PDR15	Q04182	1529 aa	Known RBP	7.77	□□□□□ -1.17
PSH1	YOL054W	SSM4	P40318	1319 aa		7.77	□□□□□ -1.17
PSH1	YOL054W	MAK16	P10962	306 aa	Predicted RBP	7.75	□□□□□ -1.17
PSH1	YOL054W	SIS2	P36024	562 aa		7.75	□□□□□ -1.17
PSH1	YOL054W	GEA1	P47102	1408 aa	Predicted RBP	7.75	□□□□□ -1.17
PSH1	YOL054W	ULS1	Q08562	1619 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	SUP45	P12385	437 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	BUD20	Q08004	166 aa	Predicted RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-H	O13535	1793 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-DR5	P0C2I2	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-DR6	P0C2I3	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-LR2	P0C2I5	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-LR3	P0C2I6	1755 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-PR1	P0C2I9	1755 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-PR2	P0C2J0	1756 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-PR3	P0C2J1	1755 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-JR1	P47098	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-ML2	Q03434	1755 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-ER1	Q03612	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-ML1	Q04711	1755 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-GR2	Q12269	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-OL	Q12273	1755 aa		7.74	□□□□□ -1.17
PSH1	YOL054W	TY1B-PL	Q12414	1755 aa	Known RBP	7.74	□□□□□ -1.17
PSH1	YOL054W	CDC25	P04821	1589 aa		7.73	□□□□□ -1.17
PSH1	YOL054W	MRF1	P30775	413 aa	Predicted RBP	7.73	□□□□□ -1.17
PSH1	YOL054W	ENO2	P00925	437 aa	Known RBP	7.72	□□□□□ -1.17
PSH1	YOL054W	NPL4	P33755	580 aa		7.72	□□□□□ -1.17
PSH1	YOL054W	RSC30	P38781	883 aa		7.72	□□□□□ -1.17
PSH1	YOL054W	TBF1	Q02457	562 aa		7.72	□□□□□ -1.17
PSH1	YOL054W	DNF1	P32660	1571 aa		7.71	□□□□□ -1.17
PSH1	YOL054W	TRM1	P15565	570 aa	Known RBP	7.71	□□□□□ -1.18
PSH1	YOL054W	YDJ1	P25491	409 aa	Known RBP	7.71	□□□□□ -1.18
PSH1	YOL054W	NUD1	P32336	851 aa		7.71	□□□□□ -1.18
PSH1	YOL054W	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	7.71	□□□□□ -1.18	not detected
PSH1	YOL054W	YPP1	P46951	817 aa		7.71	□□□□□ -1.18
PSH1	YOL054W	BNI1	P41832	1953 aa		7.71	□□□□□ -1.18
PSH1	YOL054W	TY1B-BR	Q12193	1756 aa		7.71	□□□□□ -1.18
PSH1	YOL054W	TY1B-GR3	Q12316	1755 aa		7.71	□□□□□ -1.18
PSH1	YOL054W	TY1B-OR	Q92393	1755 aa		7.71	□□□□□ -1.18
PSH1	YOL054W	PAN1	P32521	1480 aa		7.7	□□□□□ -1.18
PSH1	YOL054W	ENO1	P00924	437 aa	Known RBP	7.7	□□□□□ -1.18
PSH1	YOL054W	KEX2	P13134	814 aa		7.7	□□□□□ -1.18
PSH1	YOL054W	PUS6	P53294	404 aa		7.7	□□□□□ -1.18
PSH1	YOL054W	ITT1	Q04638	464 aa		7.7	□□□□□ -1.18
PSH1	YOL054W	NOP8	Q08287	484 aa	Predicted RBP	7.7	□□□□□ -1.18
PSH1	YOL054W	TSC11	P40061	1430 aa		7.69	□□□□□ -1.18
PSH1	YOL054W	PRT1	P06103	763 aa	Known RBP	7.69	□□□□□ -1.18
PSH1	YOL054W	RPA190	P10964	1664 aa	Known RBP	7.68	□□□□□ -1.18
PSH1	YOL054W	RIM21	P48565	533 aa		7.67	□□□□□ -1.18
PSH1	YOL054W	NAF1	P53919	492 aa	Known RBP	7.67	□□□□□ -1.18
PSH1	YOL054W	YPL062W	Q02781	134 aa		7.67	□□□□□ -1.18
PSH1	YOL054W	NOB1	Q08444	459 aa	Known RBP	7.67	□□□□□ -1.18
PSH1	YOL054W	VTH1	P40438	1549 aa		7.67	□□□□□ -1.18
PSH1	YOL054W	VTH2	P40890	1549 aa		7.67	□□□□□ -1.18
PSH1	YOL054W	CDC3	P32457	520 aa	Known RBP	7.66	□□□□□ -1.18
PSH1	YOL054W	NOP2	P40991	618 aa	Known RBP	7.66	□□□□□ -1.18
PSH1	YOL054W	STR2	P47164	639 aa		7.66	□□□□□ -1.18
PSH1	YOL054W	MRX10	Q05648	414 aa		7.66	□□□□□ -1.18
PSH1	YOL054W	SNT2	P53127	1403 aa		7.66	□□□□□ -1.18
PSH1	YOL054W	GEA2	P39993	1459 aa	Known RBP	7.66	□□□□□ -1.18
PSH1	YOL054W	TY3B-G	Q99315	1547 aa		7.66	□□□□□ -1.18
PSH1	YOL054W	SLD2	P34252	453 aa		7.65	□□□□□ -1.18
PSH1	YOL054W	ISM1	P48526	1002 aa		7.64	□□□□□ -1.19
PSH1	YOL054W	ERF2	Q06551	359 aa		7.64	□□□□□ -1.19
PSH1	YOL054W	MMS1	Q06211	1407 aa		7.63	□□□□□ -1.19
PSH1	YOL054W	PUP1	P25043	261 aa		7.63	□□□□□ -1.19
PSH1	YOL054W	ESC1	Q03661	1658 aa	Known RBP	7.63	□□□□□ -1.19
PSH1	YOL054W	TY1B-JR2	P47100	1755 aa	Known RBP	7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-ER2	Q03619	1755 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-MR1	Q04214	1755 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-MR2	Q04670	1755 aa	Known RBP	7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-LR1	Q12088	1755 aa	Known RBP	7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-NL1	Q12112	1755 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-GR1	Q12141	1755 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	TY1B-BL	Q12490	1755 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	TGL4	P36165	910 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	POL5	P39985	1022 aa	Known RBP	7.62	□□□□□ -1.19
PSH1	YOL054W	MCM16	Q12262	181 aa		7.62	□□□□□ -1.19
PSH1	YOL054W	YBT1	P32386	1661 aa		7.61	□□□□□ -1.19
PSH1	YOL054W	YML083C	Q04526	418 aa		7.61	□□□□□ -1.19
PSH1	YOL054W	YDL206W	Q12424	762 aa		7.61	□□□□□ -1.19
PSH1	YOL054W	VPS15	P22219	1454 aa		7.61	□□□□□ -1.19

Retrieved 100 of 5,963 RNA–protein pairs in 30.5 ms