RNA–Protein interactions for RNA: YNR046W

TRM112, Transcript of Protein involved in methylation of tRNA, rRNA, and translation factors, yeastyeast

Gene TRM112, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM112YNR046W YDR344CQ05510 147 aa5.86□□□□□ -1.47
TRM112YNR046W ISF1P32488 338 aa5.85□□□□□ -1.47
TRM112YNR046W SPT16P32558 1035 aaKnown RBP5.85□□□□□ -1.47
TRM112YNR046W PAC1P39946 494 aaKnown RBP5.85□□□□□ -1.47
TRM112YNR046W YJL171CP46992 396 aa5.85□□□□□ -1.47
TRM112YNR046W FRA1Q07825 749 aa5.85□□□□□ -1.47
TRM112YNR046W PDC1P06169 563 aaKnown RBP5.84□□□□□ -1.47
TRM112YNR046W RDS2P19541 446 aaKnown RBP5.84□□□□□ -1.47
TRM112YNR046W PRE3P38624 215 aa5.84□□□□□ -1.47
TRM112YNR046W KTR7P40504 517 aa5.84□□□□□ -1.47
TRM112YNR046W FIG4P42837 879 aa5.84□□□□□ -1.47
TRM112YNR046W ECM23Q02710 187 aa5.84□□□□□ -1.47
TRM112YNR046W YML083CQ04526 418 aa5.84□□□□□ -1.47
TRM112YNR046W BMT6Q12291 365 aa5.84□□□□□ -1.47
TRM112YNR046W GAL2P13181 574 aa5.83□□□□□ -1.48
TRM112YNR046W HXT10P43581 546 aa5.83□□□□□ -1.48
TRM112YNR046W UTP13Q05946 817 aaKnown RBP5.83□□□□□ -1.48
TRM112YNR046W CHL1P22516 861 aaPredicted RBP5.82□□□□□ -1.48
TRM112YNR046W SAS4Q04003 481 aa5.82□□□□□ -1.48
TRM112YNR046W YPR015CQ12531 247 aa5.82□□□□□ -1.48
TRM112YNR046W TPD3P31383 635 aa5.81□□□□□ -1.48
TRM112YNR046W YPR084WQ06821 456 aa5.8□□□□□ -1.48
TRM112YNR046W GYP1Q08484 637 aa5.8□□□□□ -1.48
TRM112YNR046W HAP4P14064 554 aa5.79□□□□□ -1.48
TRM112YNR046W UBX7P38349 436 aa5.79□□□□□ -1.48
TRM112YNR046W HAT1Q12341 374 aa5.79□□□□□ -1.48
TRM112YNR046W PHO87P25360 923 aa5.78□□□□□ -1.48
TRM112YNR046W VAC17P25591 423 aa5.78□□□□□ -1.48
TRM112YNR046W SOH1P38633 127 aa5.78□□□□□ -1.48
TRM112YNR046W MRF1P30775 413 aaPredicted RBP5.77□□□□□ -1.49
TRM112YNR046W SSF1P38789 453 aaPredicted RBP5.77□□□□□ -1.49
TRM112YNR046W RRD1P40454 393 aaKnown RBP5.77□□□□□ -1.49
TRM112YNR046W APL6P46682 809 aa5.77□□□□□ -1.49
TRM112YNR046W MOD5P07884 428 aa5.76□□□□□ -1.49
TRM112YNR046W PUF6Q04373 656 aaKnown RBP5.76□□□□□ -1.49
TRM112YNR046W YEL077CQ3E7X8 1277 aa5.76□□□□□ -1.49
TRM112YNR046W TSC13Q99190 310 aa5.76□□□□□ -1.49
TRM112YNR046W YFL034WP43564 1073 aa5.75□□□□□ -1.49
TRM112YNR046W KIP2P28743 706 aa5.74□□□□□ -1.49
TRM112YNR046W ACS2P52910 683 aaKnown RBP5.74□□□□□ -1.49
TRM112YNR046W HEM3P28789 327 aa5.73□□□□□ -1.49
TRM112YNR046W STM1P39015 273 aaKnown RBP5.73□□□□□ -1.49
TRM112YNR046W GAS4Q08271 471 aa5.73□□□□□ -1.49
TRM112YNR046W PDI1P17967 522 aaKnown RBP5.72□□□□□ -1.49
TRM112YNR046W IXR1P33417 597 aa5.72□□□□□ -1.49
TRM112YNR046W CWC15Q03772 175 aaKnown RBP5.72□□□□□ -1.49
TRM112YNR046W ISR1Q06098 443 aaKnown RBP5.72□□□□□ -1.49
TRM112YNR046W ATG20Q07528 640 aa5.72□□□□□ -1.49
TRM112YNR046W VAN1P23642 535 aa5.71□□□□□ -1.5
TRM112YNR046W ROM1P53046 1155 aa5.7□□□□□ -1.5
TRM112YNR046W SYH1Q02875 849 aaKnown RBP5.7□□□□□ -1.5
TRM112YNR046W KAR5Q04746 504 aa5.7□□□□□ -1.5
TRM112YNR046W PUN1Q06991 263 aa5.7□□□□□ -1.5
TRM112YNR046W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.7□□□□□ -1.5not detected
TRM112YNR046W YBL113CQ7M4S9 792 aa5.7□□□□□ -1.5
TRM112YNR046W SRS2P12954 1174 aa5.69□□□□□ -1.5
TRM112YNR046W MIP1P15801 1254 aa5.69□□□□□ -1.5
TRM112YNR046W AIM9P40053 627 aaKnown RBP5.69□□□□□ -1.5
TRM112YNR046W PNP1Q05788 311 aa5.69□□□□□ -1.5
TRM112YNR046W HDA3Q06623 655 aa5.69□□□□□ -1.5
TRM112YNR046W TRS33Q99394 268 aa5.69□□□□□ -1.5
TRM112YNR046W SEC20P28791 383 aa5.68□□□□□ -1.5
TRM112YNR046W HAL5P38970 855 aaKnown RBP5.68□□□□□ -1.5
TRM112YNR046W SEN54Q02825 467 aaPredicted RBP5.68□□□□□ -1.5
TRM112YNR046W FUR4P05316 633 aaKnown RBP5.67□□□□□ -1.5
TRM112YNR046W ERP5P38819 212 aa5.67□□□□□ -1.5
TRM112YNR046W EMW1P42842 904 aaKnown RBP5.67□□□□□ -1.5
TRM112YNR046W CWH41P53008 833 aa5.67□□□□□ -1.5
TRM112YNR046W ITT1Q04638 464 aa5.67□□□□□ -1.5
TRM112YNR046W RPP2BP02400 110 aaKnown RBP5.66□□□□□ -1.5
TRM112YNR046W NTH2P35172 780 aa5.66□□□□□ -1.5
TRM112YNR046W VRP1P37370 817 aa5.66□□□□□ -1.5
TRM112YNR046W BDP1P46678 594 aa5.66□□□□□ -1.5
TRM112YNR046W SNU71P53207 620 aaKnown RBP5.66□□□□□ -1.5
TRM112YNR046W PUS5Q06244 254 aa5.66□□□□□ -1.5
TRM112YNR046W ASF1P32447 279 aa5.65□□□□□ -1.5
TRM112YNR046W RRN6P32786 894 aa5.65□□□□□ -1.5
TRM112YNR046W TBS1P38114 1094 aa5.65□□□□□ -1.5
TRM112YNR046W TPS3P38426 1054 aaKnown RBP5.65□□□□□ -1.5
TRM112YNR046W NOP7P53261 605 aaKnown RBP5.65□□□□□ -1.5
TRM112YNR046W APP1P53933 587 aa5.65□□□□□ -1.5
TRM112YNR046W ISU1Q03020 165 aa5.65□□□□□ -1.5
TRM112YNR046W SPT2P06843 333 aaPredicted RBP5.64□□□□□ -1.51
TRM112YNR046W ATG1P53104 897 aa5.64□□□□□ -1.51
TRM112YNR046W FRK1Q03002 865 aaPredicted RBP5.64□□□□□ -1.51
TRM112YNR046W MSC6Q08818 692 aaKnown RBP5.64□□□□□ -1.51
TRM112YNR046W CYT1P07143 309 aa5.63□□□□□ -1.51
TRM112YNR046W TRL1P09880 827 aaKnown RBP5.63□□□□□ -1.51
TRM112YNR046W RPS6AP0CX37 236 aaKnown RBP5.63□□□□□ -1.51
TRM112YNR046W RPS6BP0CX38 236 aaPredicted RBP5.63□□□□□ -1.51
TRM112YNR046W DAT1P13483 248 aaKnown RBP5.63□□□□□ -1.51
TRM112YNR046W FBP26P32604 452 aa5.63□□□□□ -1.51
TRM112YNR046W UTR2P32623 467 aa5.63□□□□□ -1.51
TRM112YNR046W MKS1P34072 584 aa5.63□□□□□ -1.51
TRM112YNR046W SWI5P08153 709 aa5.62□□□□□ -1.51
TRM112YNR046W UBP1P25037 809 aa5.62□□□□□ -1.51
TRM112YNR046W GRS1P38088 690 aaKnown RBP5.62□□□□□ -1.51
TRM112YNR046W IPL1P38991 367 aa5.62□□□□□ -1.51
TRM112YNR046W ACF4P47129 309 aa5.62□□□□□ -1.51
TRM112YNR046W NGR1P32831 672 aaKnown RBP5.61□□□□□ -1.51
Retrieved 100 of 5,963 RNA–protein pairs in 11.4 ms