RNA–Protein interactions for RNA: YNL330C

RPD3, Transcript of Histone deacetylase, component of both the Rpd3S and Rpd3L complexes, yeastyeast

Gene RPD3, Length 1,302 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPD3YNL330C EDE1P34216 1381 aa10.47□□□□□ -0.73
RPD3YNL330C SRT1Q03175 343 aa10.46□□□□□ -0.73
RPD3YNL330C YMR196WQ04336 1088 aa10.45□□□□□ -0.74
RPD3YNL330C YPP1P46951 817 aa10.44□□□□□ -0.74
RPD3YNL330C CAB3P36076 571 aa10.43□□□□□ -0.74
RPD3YNL330C LSP1Q12230 341 aaKnown RBP10.43□□□□□ -0.74
RPD3YNL330C YRF1-2P40105 1681 aa10.42□□□□□ -0.74
RPD3YNL330C YNG2P38806 282 aaKnown RBP10.42□□□□□ -0.74
RPD3YNL330C CTF4Q01454 927 aa10.42□□□□□ -0.74
RPD3YNL330C AOS1Q06624 347 aa10.41□□□□□ -0.74
RPD3YNL330C RPS19AP07280 144 aaKnown RBP10.4□□□□□ -0.74
RPD3YNL330C RPS19BP07281 144 aaPredicted RBP10.4□□□□□ -0.74
RPD3YNL330C HSP104P31539 908 aaKnown RBP10.4□□□□□ -0.74
RPD3YNL330C DJP1P40564 432 aa10.4□□□□□ -0.74
RPD3YNL330C CSI1Q04368 295 aa10.4□□□□□ -0.74
RPD3YNL330C BMS1Q08965 1183 aaKnown RBP10.4□□□□□ -0.74
RPD3YNL330C YBR287WP38355 427 aa10.39□□□□□ -0.75
RPD3YNL330C NKP2Q06162 153 aa10.39□□□□□ -0.75
RPD3YNL330C RLF2Q12495 606 aa10.39□□□□□ -0.75
RPD3YNL330C RAD50P12753 1312 aa10.39□□□□□ -0.75
RPD3YNL330C MSP1P28737 362 aa10.38□□□□□ -0.75
RPD3YNL330C SPO1P53541 631 aa10.38□□□□□ -0.75
RPD3YNL330C ILV3P39522 585 aaKnown RBP10.37□□□□□ -0.75
RPD3YNL330C YCK3P39962 524 aa10.37□□□□□ -0.75
RPD3YNL330C NSE3Q05541 303 aa10.37□□□□□ -0.75
RPD3YNL330C TY4B-HP0C2J7 1802 aa10.37□□□□□ -0.75
RPD3YNL330C TY4B-JP47024 1803 aa10.37□□□□□ -0.75
RPD3YNL330C COQ4O13525 335 aa10.36□□□□□ -0.75
RPD3YNL330C UGA3P26370 528 aa10.36□□□□□ -0.75
RPD3YNL330C RFC1P38630 861 aaKnown RBP10.36□□□□□ -0.75
RPD3YNL330C NMD2P38798 1089 aaKnown RBP10.36□□□□□ -0.75
RPD3YNL330C ITC1P53125 1264 aa10.36□□□□□ -0.75
RPD3YNL330C NOP8Q08287 484 aaPredicted RBP10.36□□□□□ -0.75
RPD3YNL330C RRP5Q05022 1729 aaKnown RBP10.36□□□□□ -0.75
RPD3YNL330C SLN1P39928 1220 aaPredicted RBP10.34□□□□□ -0.75
RPD3YNL330C DLD1P32891 587 aa10.33□□□□□ -0.76
RPD3YNL330C GCR2Q01722 534 aa10.33□□□□□ -0.76
RPD3YNL330C SRS2P12954 1174 aa10.33□□□□□ -0.76
RPD3YNL330C PRP5P21372 849 aaPredicted RBP10.33□□□□□ -0.76
RPD3YNL330C EBP2P36049 427 aaKnown RBP10.33□□□□□ -0.76
RPD3YNL330C ARL1P38116 183 aaKnown RBP10.33□□□□□ -0.76
RPD3YNL330C LYS2P07702 1392 aa10.32□□□□□ -0.76
RPD3YNL330C KCC4P25389 1037 aa10.32□□□□□ -0.76
RPD3YNL330C HGH1P48362 394 aaKnown RBP10.32□□□□□ -0.76
RPD3YNL330C YOL057WQ08225 711 aa10.32□□□□□ -0.76
RPD3YNL330C SLM3Q12093 417 aa10.32□□□□□ -0.76
RPD3YNL330C NUP145P49687 1317 aa10.32□□□□□ -0.76
RPD3YNL330C YIL177CP40434 1758 aa10.31□□□□□ -0.76
RPD3YNL330C YJL225CP40889 1758 aa10.31□□□□□ -0.76
RPD3YNL330C THI12P42883 340 aa10.31□□□□□ -0.76
RPD3YNL330C THI5P43534 340 aa10.31□□□□□ -0.76
RPD3YNL330C THI11P47183 340 aa10.31□□□□□ -0.76
RPD3YNL330C THI13Q07748 340 aa10.31□□□□□ -0.76
RPD3YNL330C FKS3Q04952 1785 aa10.3□□□□□ -0.76
RPD3YNL330C GCD7P32502 381 aaPredicted RBP10.3□□□□□ -0.76
RPD3YNL330C BRN1P38170 754 aa10.3□□□□□ -0.76
RPD3YNL330C TEA1P47988 759 aa10.3□□□□□ -0.76
RPD3YNL330C COG8Q04632 607 aa10.3□□□□□ -0.76
RPD3YNL330C ROM2P51862 1356 aaKnown RBP10.29□□□□□ -0.76
RPD3YNL330C CDC16P09798 840 aa10.29□□□□□ -0.76
RPD3YNL330C RAD24P32641 659 aa10.29□□□□□ -0.76
RPD3YNL330C URB1P34241 1764 aaKnown RBP10.28□□□□□ -0.76
RPD3YNL330C MRP7P12687 371 aa10.28□□□□□ -0.76
RPD3YNL330C RAD4P14736 754 aa10.27□□□□□ -0.77
RPD3YNL330C PRP45P28004 379 aaPredicted RBP10.27□□□□□ -0.77
RPD3YNL330C NOT3P06102 836 aaKnown RBP10.26□□□□□ -0.77
RPD3YNL330C BOI2P39969 1040 aa10.26□□□□□ -0.77
RPD3YNL330C RCR1P38212 213 aa10.25□□□□□ -0.77
RPD3YNL330C XKS1P42826 600 aa10.25□□□□□ -0.77
RPD3YNL330C MSB3P48566 633 aaPredicted RBP10.25□□□□□ -0.77
RPD3YNL330C HAP5Q02516 242 aa10.25□□□□□ -0.77
RPD3YNL330C YDR306CQ06640 478 aa10.25□□□□□ -0.77
RPD3YNL330C VAS1P07806 1104 aaKnown RBP10.24□□□□□ -0.77
RPD3YNL330C RNR2P09938 399 aaKnown RBP10.24□□□□□ -0.77
RPD3YNL330C MNN4P36044 1178 aa10.24□□□□□ -0.77
RPD3YNL330C BDP1P46678 594 aa10.24□□□□□ -0.77
RPD3YNL330C YGR122WP53272 402 aa10.24□□□□□ -0.77
RPD3YNL330C TCB1Q12466 1186 aa10.24□□□□□ -0.77
RPD3YNL330C HXT13P39924 564 aa10.23□□□□□ -0.77
RPD3YNL330C KNS1P32350 737 aaPredicted RBP10.22□□□□□ -0.77
RPD3YNL330C SPT21P35209 758 aa10.22□□□□□ -0.77
RPD3YNL330C TCB2P48231 1178 aa10.22□□□□□ -0.77
RPD3YNL330C DNM1P54861 757 aa10.22□□□□□ -0.77
RPD3YNL330C BDH2P39713 417 aa10.21□□□□□ -0.78
RPD3YNL330C INP54Q08227 384 aaKnown RBP10.21□□□□□ -0.78
RPD3YNL330C SWC3P31376 625 aa10.2□□□□□ -0.78
RPD3YNL330C CST6P40535 587 aa10.2□□□□□ -0.78
RPD3YNL330C HXT17P53631 564 aa10.2□□□□□ -0.78
RPD3YNL330C HST1P53685 503 aa10.19□□□□□ -0.78
RPD3YNL330C NCB2Q92317 146 aa10.19□□□□□ -0.78
RPD3YNL330C NUP133P36161 1157 aa10.18□□□□□ -0.78
RPD3YNL330C NPA3P47122 385 aa10.18□□□□□ -0.78
RPD3YNL330C PIL1P53252 339 aaKnown RBP10.18□□□□□ -0.78
RPD3YNL330C MEC3Q02574 474 aa10.18□□□□□ -0.78
RPD3YNL330C VPS20Q04272 221 aa10.18□□□□□ -0.78
RPD3YNL330C ALE1Q08548 619 aa10.18□□□□□ -0.78
RPD3YNL330C LCD1Q04377 747 aa10.17□□□□□ -0.78
RPD3YNL330C RSF2P46974 1380 aa10.16□□□□□ -0.78
RPD3YNL330C BIK1P11709 440 aa10.16□□□□□ -0.78
RPD3YNL330C SSF1P38789 453 aaPredicted RBP10.16□□□□□ -0.78
Retrieved 100 of 5,963 RNA–protein pairs in 9.9 ms