RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeastyeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSB3YNL293W ASF1P32447 279 aa8.16□□□□□ -1.1
MSB3YNL293W CDC45Q08032 650 aa8.16□□□□□ -1.1
MSB3YNL293W PDI1P17967 522 aaKnown RBP8.15□□□□□ -1.1
MSB3YNL293W TOM71P38825 639 aaKnown RBP8.15□□□□□ -1.1
MSB3YNL293W MPH1P40562 993 aa8.15□□□□□ -1.1
MSB3YNL293W RVB2Q12464 471 aaKnown RBP8.15□□□□□ -1.1
MSB3YNL293W DNA2P38859 1522 aa8.15□□□□□ -1.1
MSB3YNL293W GEA1P47102 1408 aaPredicted RBP8.15□□□□□ -1.1
MSB3YNL293W SEC14P24280 304 aaKnown RBP8.15□□□□□ -1.11
MSB3YNL293W VPS41P38959 992 aa8.15□□□□□ -1.11
MSB3YNL293W CEP3P40969 608 aa8.15□□□□□ -1.11
MSB3YNL293W STU2P46675 888 aa8.15□□□□□ -1.11
MSB3YNL293W CCM1P48237 864 aaPredicted RBP8.15□□□□□ -1.11
MSB3YNL293W YNL035CP53962 389 aaKnown RBP8.15□□□□□ -1.11
MSB3YNL293W CLF1Q12309 687 aaPredicted RBP8.15□□□□□ -1.11
MSB3YNL293W THR4P16120 514 aaKnown RBP8.14□□□□□ -1.11
MSB3YNL293W BEM4P39011 633 aa8.14□□□□□ -1.11
MSB3YNL293W SAP1P39955 897 aaKnown RBP8.14□□□□□ -1.11
MSB3YNL293W HUL5P53119 910 aa8.14□□□□□ -1.11
MSB3YNL293W MSH1P25846 959 aa8.13□□□□□ -1.11
MSB3YNL293W EXO84P38261 753 aa8.13□□□□□ -1.11
MSB3YNL293W GDT1P38301 280 aaPredicted RBP8.13□□□□□ -1.11
MSB3YNL293W LSO1Q3E827 93 aa8.13□□□□□ -1.11
MSB3YNL293W NUP145P49687 1317 aa8.13□□□□□ -1.11
MSB3YNL293W ARP5P53946 755 aa8.13□□□□□ -1.11
MSB3YNL293W PAN1P32521 1480 aa8.12□□□□□ -1.11
MSB3YNL293W EFB1P32471 206 aaKnown RBP8.12□□□□□ -1.11
MSB3YNL293W SEC26P41810 973 aaKnown RBP8.12□□□□□ -1.11
MSB3YNL293W ARO80Q04052 950 aa8.12□□□□□ -1.11
MSB3YNL293W RKM3P38222 552 aa8.11□□□□□ -1.11
MSB3YNL293W INP52P50942 1183 aa8.11□□□□□ -1.11
MSB3YNL293W SYH1Q02875 849 aaKnown RBP8.11□□□□□ -1.11
MSB3YNL293W PKH1Q03407 766 aa8.11□□□□□ -1.11
MSB3YNL293W CEF1Q03654 590 aaPredicted RBP8.11□□□□□ -1.11
MSB3YNL293W PDS5Q04264 1277 aa8.11□□□□□ -1.11
MSB3YNL293W NKP1Q12493 238 aa8.11□□□□□ -1.11
MSB3YNL293W HST2P53686 357 aa8.11□□□□□ -1.11
MSB3YNL293W HAP5Q02516 242 aa8.11□□□□□ -1.11
MSB3YNL293W UBX2Q04228 584 aa8.11□□□□□ -1.11
MSB3YNL293W TSC11P40061 1430 aa8.1□□□□□ -1.11
MSB3YNL293W RPP0P05317 312 aaKnown RBP8.1□□□□□ -1.11
MSB3YNL293W MAK11P20484 414 aaKnown RBP8.1□□□□□ -1.11
MSB3YNL293W CDC3P32457 520 aaKnown RBP8.1□□□□□ -1.11
MSB3YNL293W SEC27P41811 889 aaKnown RBP8.1□□□□□ -1.11
MSB3YNL293W TIF3P34167 436 aaKnown RBP8.09□□□□□ -1.11
MSB3YNL293W ATG36P46983 293 aa8.09□□□□□ -1.11
MSB3YNL293W SHE4P51534 789 aa8.09□□□□□ -1.11
MSB3YNL293W REV3P14284 1504 aa8.09□□□□□ -1.11
MSB3YNL293W MIC60P36112 540 aa8.09□□□□□ -1.11
MSB3YNL293W YRB1P41920 201 aaKnown RBP8.09□□□□□ -1.11
MSB3YNL293W ATG26Q06321 1198 aa8.09□□□□□ -1.11
MSB3YNL293W RRP9Q06506 573 aaKnown RBP8.09□□□□□ -1.11
MSB3YNL293W UTP4Q06679 776 aaKnown RBP8.09□□□□□ -1.11
MSB3YNL293W MLP2P40457 1679 aa8.09□□□□□ -1.11
MSB3YNL293W IST1P53843 298 aaPredicted RBP8.08□□□□□ -1.12
MSB3YNL293W YNL247WP53852 767 aaKnown RBP8.08□□□□□ -1.12
MSB3YNL293W SPO19Q03029 223 aa8.08□□□□□ -1.12
MSB3YNL293W VMS1Q04311 632 aaKnown RBP8.08□□□□□ -1.12
MSB3YNL293W HSL1P34244 1518 aa8.08□□□□□ -1.12
MSB3YNL293W ADE12P80210 433 aaKnown RBP8.07□□□□□ -1.12
MSB3YNL293W NUP157P40064 1391 aaKnown RBP8.07□□□□□ -1.12
MSB3YNL293W STU1P38198 1513 aa8.07□□□□□ -1.12
MSB3YNL293W ELM1P32801 640 aa8.07□□□□□ -1.12
MSB3YNL293W PBY1P38254 753 aa8.07□□□□□ -1.12
MSB3YNL293W PET100P38958 111 aa8.07□□□□□ -1.12
MSB3YNL293W SUM1P46676 1062 aa8.07□□□□□ -1.12
MSB3YNL293W TIM11P81449 96 aaPredicted RBP8.07□□□□□ -1.12
MSB3YNL293W YML119WQ03208 357 aa8.07□□□□□ -1.12
MSB3YNL293W YLR257WQ06146 321 aaKnown RBP8.07□□□□□ -1.12
MSB3YNL293W SCC2Q04002 1493 aa8.06□□□□□ -1.12
MSB3YNL293W RFC1P38630 861 aaKnown RBP8.06□□□□□ -1.12
MSB3YNL293W SPR3P41901 512 aa8.06□□□□□ -1.12
MSB3YNL293W OSW7P43611 510 aa8.06□□□□□ -1.12
MSB3YNL293W TAF1P46677 1066 aa8.06□□□□□ -1.12
MSB3YNL293W SLX4Q12098 748 aa8.06□□□□□ -1.12
MSB3YNL293W CYC8P14922 966 aa8.05□□□□□ -1.12
MSB3YNL293W RPT2P40327 437 aaKnown RBP8.05□□□□□ -1.12
MSB3YNL293W BTN2P53286 410 aa8.05□□□□□ -1.12
MSB3YNL293W STE20Q03497 939 aaKnown RBP8.05□□□□□ -1.12
MSB3YNL293W YDR338CQ05497 695 aa8.05□□□□□ -1.12
MSB3YNL293W YPR172WQ06608 200 aa8.05□□□□□ -1.12
MSB3YNL293W RIX7Q07844 837 aaKnown RBP8.05□□□□□ -1.12
MSB3YNL293W RTC1Q08281 1341 aa8.05□□□□□ -1.12
MSB3YNL293W MRPS28P21771 286 aa8.05□□□□□ -1.12
MSB3YNL293W SSA4P22202 642 aaKnown RBP8.05□□□□□ -1.12
MSB3YNL293W YME2P32843 850 aa8.05□□□□□ -1.12
MSB3YNL293W ERC1P38767 581 aa8.05□□□□□ -1.12
MSB3YNL293W TLG2Q08144 397 aa8.05□□□□□ -1.12
MSB3YNL293W YPL225WQ08971 146 aaKnown RBP8.05□□□□□ -1.12
MSB3YNL293W KDX1P36005 433 aa8.04□□□□□ -1.12
MSB3YNL293W ALD2P47771 506 aa8.04□□□□□ -1.12
MSB3YNL293W YEF3P16521 1044 aaKnown RBP8.03□□□□□ -1.12
MSB3YNL293W SEC6P32844 805 aa8.03□□□□□ -1.12
MSB3YNL293W RRP1P35178 278 aaPredicted RBP8.03□□□□□ -1.12
MSB3YNL293W INP2Q03824 705 aa8.03□□□□□ -1.12
MSB3YNL293W CIR2Q08822 631 aa8.03□□□□□ -1.12
MSB3YNL293W APC2Q12440 853 aa8.03□□□□□ -1.12
MSB3YNL293W YKL068W-AQ3E826 78 aa8.03□□□□□ -1.12
MSB3YNL293W HEL2Q05580 639 aaKnown RBP8.03□□□□□ -1.12
MSB3YNL293W UBP1P25037 809 aa8.02□□□□□ -1.13
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms