RNA–Protein interactions for RNA: YNL293W

MSB3, Transcript of Rab GTPase-activating protein, yeast

Gene MSB3, Length 1,902 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSB3	YNL293W	ASF1	P32447	279 aa		8.16	□□□□□ -1.1
MSB3	YNL293W	CDC45	Q08032	650 aa		8.16	□□□□□ -1.1
MSB3	YNL293W	PDI1	P17967	522 aa	Known RBP	8.15	□□□□□ -1.1
MSB3	YNL293W	TOM71	P38825	639 aa	Known RBP	8.15	□□□□□ -1.1
MSB3	YNL293W	MPH1	P40562	993 aa		8.15	□□□□□ -1.1
MSB3	YNL293W	RVB2	Q12464	471 aa	Known RBP	8.15	□□□□□ -1.1
MSB3	YNL293W	DNA2	P38859	1522 aa		8.15	□□□□□ -1.1
MSB3	YNL293W	GEA1	P47102	1408 aa	Predicted RBP	8.15	□□□□□ -1.1
MSB3	YNL293W	SEC14	P24280	304 aa	Known RBP	8.15	□□□□□ -1.11
MSB3	YNL293W	VPS41	P38959	992 aa		8.15	□□□□□ -1.11
MSB3	YNL293W	CEP3	P40969	608 aa		8.15	□□□□□ -1.11
MSB3	YNL293W	STU2	P46675	888 aa		8.15	□□□□□ -1.11
MSB3	YNL293W	CCM1	P48237	864 aa	Predicted RBP	8.15	□□□□□ -1.11
MSB3	YNL293W	YNL035C	P53962	389 aa	Known RBP	8.15	□□□□□ -1.11
MSB3	YNL293W	CLF1	Q12309	687 aa	Predicted RBP	8.15	□□□□□ -1.11
MSB3	YNL293W	THR4	P16120	514 aa	Known RBP	8.14	□□□□□ -1.11
MSB3	YNL293W	BEM4	P39011	633 aa		8.14	□□□□□ -1.11
MSB3	YNL293W	SAP1	P39955	897 aa	Known RBP	8.14	□□□□□ -1.11
MSB3	YNL293W	HUL5	P53119	910 aa		8.14	□□□□□ -1.11
MSB3	YNL293W	MSH1	P25846	959 aa		8.13	□□□□□ -1.11
MSB3	YNL293W	EXO84	P38261	753 aa		8.13	□□□□□ -1.11
MSB3	YNL293W	GDT1	P38301	280 aa	Predicted RBP	8.13	□□□□□ -1.11
MSB3	YNL293W	LSO1	Q3E827	93 aa		8.13	□□□□□ -1.11
MSB3	YNL293W	NUP145	P49687	1317 aa		8.13	□□□□□ -1.11
MSB3	YNL293W	ARP5	P53946	755 aa		8.13	□□□□□ -1.11
MSB3	YNL293W	PAN1	P32521	1480 aa		8.12	□□□□□ -1.11
MSB3	YNL293W	EFB1	P32471	206 aa	Known RBP	8.12	□□□□□ -1.11
MSB3	YNL293W	SEC26	P41810	973 aa	Known RBP	8.12	□□□□□ -1.11
MSB3	YNL293W	ARO80	Q04052	950 aa		8.12	□□□□□ -1.11
MSB3	YNL293W	RKM3	P38222	552 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	INP52	P50942	1183 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	SYH1	Q02875	849 aa	Known RBP	8.11	□□□□□ -1.11
MSB3	YNL293W	PKH1	Q03407	766 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	CEF1	Q03654	590 aa	Predicted RBP	8.11	□□□□□ -1.11
MSB3	YNL293W	PDS5	Q04264	1277 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	NKP1	Q12493	238 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	HST2	P53686	357 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	HAP5	Q02516	242 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	UBX2	Q04228	584 aa		8.11	□□□□□ -1.11
MSB3	YNL293W	TSC11	P40061	1430 aa		8.1	□□□□□ -1.11
MSB3	YNL293W	RPP0	P05317	312 aa	Known RBP	8.1	□□□□□ -1.11
MSB3	YNL293W	MAK11	P20484	414 aa	Known RBP	8.1	□□□□□ -1.11
MSB3	YNL293W	CDC3	P32457	520 aa	Known RBP	8.1	□□□□□ -1.11
MSB3	YNL293W	SEC27	P41811	889 aa	Known RBP	8.1	□□□□□ -1.11
MSB3	YNL293W	TIF3	P34167	436 aa	Known RBP	8.09	□□□□□ -1.11
MSB3	YNL293W	ATG36	P46983	293 aa		8.09	□□□□□ -1.11
MSB3	YNL293W	SHE4	P51534	789 aa		8.09	□□□□□ -1.11
MSB3	YNL293W	REV3	P14284	1504 aa		8.09	□□□□□ -1.11
MSB3	YNL293W	MIC60	P36112	540 aa		8.09	□□□□□ -1.11
MSB3	YNL293W	YRB1	P41920	201 aa	Known RBP	8.09	□□□□□ -1.11
MSB3	YNL293W	ATG26	Q06321	1198 aa		8.09	□□□□□ -1.11
MSB3	YNL293W	RRP9	Q06506	573 aa	Known RBP	8.09	□□□□□ -1.11
MSB3	YNL293W	UTP4	Q06679	776 aa	Known RBP	8.09	□□□□□ -1.11
MSB3	YNL293W	MLP2	P40457	1679 aa		8.09	□□□□□ -1.11
MSB3	YNL293W	IST1	P53843	298 aa	Predicted RBP	8.08	□□□□□ -1.12
MSB3	YNL293W	YNL247W	P53852	767 aa	Known RBP	8.08	□□□□□ -1.12
MSB3	YNL293W	SPO19	Q03029	223 aa		8.08	□□□□□ -1.12
MSB3	YNL293W	VMS1	Q04311	632 aa	Known RBP	8.08	□□□□□ -1.12
MSB3	YNL293W	HSL1	P34244	1518 aa		8.08	□□□□□ -1.12
MSB3	YNL293W	ADE12	P80210	433 aa	Known RBP	8.07	□□□□□ -1.12
MSB3	YNL293W	NUP157	P40064	1391 aa	Known RBP	8.07	□□□□□ -1.12
MSB3	YNL293W	STU1	P38198	1513 aa		8.07	□□□□□ -1.12
MSB3	YNL293W	ELM1	P32801	640 aa		8.07	□□□□□ -1.12
MSB3	YNL293W	PBY1	P38254	753 aa		8.07	□□□□□ -1.12
MSB3	YNL293W	PET100	P38958	111 aa		8.07	□□□□□ -1.12
MSB3	YNL293W	SUM1	P46676	1062 aa		8.07	□□□□□ -1.12
MSB3	YNL293W	TIM11	P81449	96 aa	Predicted RBP	8.07	□□□□□ -1.12
MSB3	YNL293W	YML119W	Q03208	357 aa		8.07	□□□□□ -1.12
MSB3	YNL293W	YLR257W	Q06146	321 aa	Known RBP	8.07	□□□□□ -1.12
MSB3	YNL293W	SCC2	Q04002	1493 aa		8.06	□□□□□ -1.12
MSB3	YNL293W	RFC1	P38630	861 aa	Known RBP	8.06	□□□□□ -1.12
MSB3	YNL293W	SPR3	P41901	512 aa		8.06	□□□□□ -1.12
MSB3	YNL293W	OSW7	P43611	510 aa		8.06	□□□□□ -1.12
MSB3	YNL293W	TAF1	P46677	1066 aa		8.06	□□□□□ -1.12
MSB3	YNL293W	SLX4	Q12098	748 aa		8.06	□□□□□ -1.12
MSB3	YNL293W	CYC8	P14922	966 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	RPT2	P40327	437 aa	Known RBP	8.05	□□□□□ -1.12
MSB3	YNL293W	BTN2	P53286	410 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	STE20	Q03497	939 aa	Known RBP	8.05	□□□□□ -1.12
MSB3	YNL293W	YDR338C	Q05497	695 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	YPR172W	Q06608	200 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	RIX7	Q07844	837 aa	Known RBP	8.05	□□□□□ -1.12
MSB3	YNL293W	RTC1	Q08281	1341 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	MRPS28	P21771	286 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	SSA4	P22202	642 aa	Known RBP	8.05	□□□□□ -1.12
MSB3	YNL293W	YME2	P32843	850 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	ERC1	P38767	581 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	TLG2	Q08144	397 aa		8.05	□□□□□ -1.12
MSB3	YNL293W	YPL225W	Q08971	146 aa	Known RBP	8.05	□□□□□ -1.12
MSB3	YNL293W	KDX1	P36005	433 aa		8.04	□□□□□ -1.12
MSB3	YNL293W	ALD2	P47771	506 aa		8.04	□□□□□ -1.12
MSB3	YNL293W	YEF3	P16521	1044 aa	Known RBP	8.03	□□□□□ -1.12
MSB3	YNL293W	SEC6	P32844	805 aa		8.03	□□□□□ -1.12
MSB3	YNL293W	RRP1	P35178	278 aa	Predicted RBP	8.03	□□□□□ -1.12
MSB3	YNL293W	INP2	Q03824	705 aa		8.03	□□□□□ -1.12
MSB3	YNL293W	CIR2	Q08822	631 aa		8.03	□□□□□ -1.12
MSB3	YNL293W	APC2	Q12440	853 aa		8.03	□□□□□ -1.12
MSB3	YNL293W	YKL068W-A	Q3E826	78 aa		8.03	□□□□□ -1.12
MSB3	YNL293W	HEL2	Q05580	639 aa	Known RBP	8.03	□□□□□ -1.12
MSB3	YNL293W	UBP1	P25037	809 aa		8.02	□□□□□ -1.13

Retrieved 100 of 5,963 RNA–protein pairs in 12.3 ms