RNA–Protein interactions for RNA: YNL054W-A

YNL054W-A, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YNL054W-A, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YNL054W-AYNL054W-A PDC1P06169 563 aaKnown RBP7.04□□□□□ -1.28
YNL054W-AYNL054W-A TEC1P18412 486 aa7.04□□□□□ -1.28
YNL054W-AYNL054W-A PAC1P39946 494 aaKnown RBP7.04□□□□□ -1.28
YNL054W-AYNL054W-A KTR7P40504 517 aa7.04□□□□□ -1.28
YNL054W-AYNL054W-A HAT1Q12341 374 aa7.04□□□□□ -1.28
YNL054W-AYNL054W-A GUT2P32191 649 aa7.03□□□□□ -1.28
YNL054W-AYNL054W-A SAP30P38429 201 aa7.03□□□□□ -1.28
YNL054W-AYNL054W-A ALR1Q08269 859 aa7.03□□□□□ -1.28
YNL054W-AYNL054W-A STE20Q03497 939 aaKnown RBP7.02□□□□□ -1.28
YNL054W-AYNL054W-A SPT23P35210 1082 aa7.01□□□□□ -1.29
YNL054W-AYNL054W-A UTP13Q05946 817 aaKnown RBP7.01□□□□□ -1.29
YNL054W-AYNL054W-A ENV9Q08651 330 aa7.01□□□□□ -1.29
YNL054W-AYNL054W-A PRT1P06103 763 aaKnown RBP7.01□□□□□ -1.29
YNL054W-AYNL054W-A TPD3P31383 635 aa7□□□□□ -1.29
YNL054W-AYNL054W-A UBX7P38349 436 aa7□□□□□ -1.29
YNL054W-AYNL054W-A CWC15Q03772 175 aaKnown RBP7□□□□□ -1.29
YNL054W-AYNL054W-A PHO87P25360 923 aa6.99□□□□□ -1.29
YNL054W-AYNL054W-A HEM3P28789 327 aa6.99□□□□□ -1.29
YNL054W-AYNL054W-A TPS3P38426 1054 aaKnown RBP6.99□□□□□ -1.29
YNL054W-AYNL054W-A ATG3P40344 310 aa6.99□□□□□ -1.29
YNL054W-AYNL054W-A YML082WQ04533 649 aaKnown RBP6.99□□□□□ -1.29
YNL054W-AYNL054W-A YEL077CQ3E7X8 1277 aa6.99□□□□□ -1.29
YNL054W-AYNL054W-A RRN7P40992 514 aa6.98□□□□□ -1.29
YNL054W-AYNL054W-A HXT10P43581 546 aa6.98□□□□□ -1.29
YNL054W-AYNL054W-A KXD1P53158 218 aa6.98□□□□□ -1.29
YNL054W-AYNL054W-A ELP4Q02884 456 aaKnown RBP6.98□□□□□ -1.29
YNL054W-AYNL054W-A MOD5P07884 428 aa6.97□□□□□ -1.29
YNL054W-AYNL054W-A VAC17P25591 423 aa6.97□□□□□ -1.29
YNL054W-AYNL054W-A SOH1P38633 127 aa6.97□□□□□ -1.29
YNL054W-AYNL054W-A PTC2P39966 464 aaKnown RBP6.97□□□□□ -1.29
YNL054W-AYNL054W-A ACS2P52910 683 aaKnown RBP6.97□□□□□ -1.29
YNL054W-AYNL054W-A ROM1P53046 1155 aa6.96□□□□□ -1.3
YNL054W-AYNL054W-A PUF6Q04373 656 aaKnown RBP6.96□□□□□ -1.3
YNL054W-AYNL054W-A YBL113CQ7M4S9 792 aa6.96□□□□□ -1.3
YNL054W-AYNL054W-A TRL1P09880 827 aaKnown RBP6.95□□□□□ -1.3
YNL054W-AYNL054W-A HAP4P14064 554 aa6.95□□□□□ -1.3
YNL054W-AYNL054W-A ERP5P38819 212 aa6.95□□□□□ -1.3
YNL054W-AYNL054W-A STM1P39015 273 aaKnown RBP6.94□□□□□ -1.3
YNL054W-AYNL054W-A RRD1P40454 393 aaKnown RBP6.94□□□□□ -1.3
YNL054W-AYNL054W-A HAL5P38970 855 aaKnown RBP6.93□□□□□ -1.3
YNL054W-AYNL054W-A TSC13Q99190 310 aa6.93□□□□□ -1.3
YNL054W-AYNL054W-A PAT1P25644 796 aaKnown RBP6.92□□□□□ -1.3
YNL054W-AYNL054W-A IXR1P33417 597 aa6.92□□□□□ -1.3
YNL054W-AYNL054W-A GAS4Q08271 471 aa6.92□□□□□ -1.3
YNL054W-AYNL054W-A PRE3P38624 215 aa6.91□□□□□ -1.3
YNL054W-AYNL054W-A IPL1P38991 367 aa6.91□□□□□ -1.3
YNL054W-AYNL054W-A MDJ2P42834 146 aa6.91□□□□□ -1.3
YNL054W-AYNL054W-A RRN6P32786 894 aa6.9□□□□□ -1.3
YNL054W-AYNL054W-A PAM1P37304 830 aaKnown RBP6.9□□□□□ -1.3
YNL054W-AYNL054W-A SNU71P53207 620 aaKnown RBP6.9□□□□□ -1.3
YNL054W-AYNL054W-A KAR5Q04746 504 aa6.9□□□□□ -1.3
YNL054W-AYNL054W-A MSC6Q08818 692 aaKnown RBP6.9□□□□□ -1.3
YNL054W-AYNL054W-A SPT16P32558 1035 aaKnown RBP6.89□□□□□ -1.31
YNL054W-AYNL054W-A BOL3P39724 118 aa6.89□□□□□ -1.31
YNL054W-AYNL054W-A PNP1Q05788 311 aa6.89□□□□□ -1.31
YNL054W-AYNL054W-A SRS2P12954 1174 aa6.88□□□□□ -1.31
YNL054W-AYNL054W-A PDI1P17967 522 aaKnown RBP6.88□□□□□ -1.31
YNL054W-AYNL054W-A SEC20P28791 383 aa6.88□□□□□ -1.31
YNL054W-AYNL054W-A ORC1P54784 914 aaPredicted RBP6.88□□□□□ -1.31
YNL054W-AYNL054W-A ITT1Q04638 464 aa6.88□□□□□ -1.31
YNL054W-AYNL054W-A RRP15Q06511 250 aaPredicted RBP6.88□□□□□ -1.31
YNL054W-AYNL054W-A CBC2Q08920 208 aaKnown RBP RIP-Chip data6.88□□□□□ -1.31not detected
YNL054W-AYNL054W-A ATG1P53104 897 aa6.87□□□□□ -1.31
YNL054W-AYNL054W-A ISR1Q06098 443 aaKnown RBP6.87□□□□□ -1.31
YNL054W-AYNL054W-A SAS4Q04003 481 aa6.86□□□□□ -1.31
YNL054W-AYNL054W-A HDA3Q06623 655 aa6.86□□□□□ -1.31
YNL054W-AYNL054W-A VAN1P23642 535 aa6.85□□□□□ -1.31
YNL054W-AYNL054W-A SUV3P32580 737 aa6.85□□□□□ -1.31
YNL054W-AYNL054W-A YHL050CP38721 697 aa6.85□□□□□ -1.31
YNL054W-AYNL054W-A YHR219WP38900 624 aa6.85□□□□□ -1.31
YNL054W-AYNL054W-A NOP7P53261 605 aaKnown RBP6.85□□□□□ -1.31
YNL054W-AYNL054W-A PUN1Q06991 263 aa6.85□□□□□ -1.31
YNL054W-AYNL054W-A MIP1P15801 1254 aa6.84□□□□□ -1.31
YNL054W-AYNL054W-A CHL1P22516 861 aaPredicted RBP6.84□□□□□ -1.31
YNL054W-AYNL054W-A UBP1P25037 809 aa6.84□□□□□ -1.31
YNL054W-AYNL054W-A GRS1P38088 690 aaKnown RBP6.84□□□□□ -1.31
YNL054W-AYNL054W-A PPX1P38698 397 aa6.84□□□□□ -1.31
YNL054W-AYNL054W-A AIM9P40053 627 aaKnown RBP6.84□□□□□ -1.31
YNL054W-AYNL054W-A YFL034WP43564 1073 aa6.84□□□□□ -1.31
YNL054W-AYNL054W-A EMW1P42842 904 aaKnown RBP6.83□□□□□ -1.32
YNL054W-AYNL054W-A ATG20Q07528 640 aa6.83□□□□□ -1.32
YNL054W-AYNL054W-A ASF1P32447 279 aa6.82□□□□□ -1.32
YNL054W-AYNL054W-A ALD4P46367 519 aaKnown RBP6.82□□□□□ -1.32
YNL054W-AYNL054W-A WHI5Q12416 295 aa6.82□□□□□ -1.32
YNL054W-AYNL054W-A LSO1Q3E827 93 aa6.82□□□□□ -1.32
YNL054W-AYNL054W-A TRS33Q99394 268 aa6.82□□□□□ -1.32
YNL054W-AYNL054W-A SPT2P06843 333 aaPredicted RBP6.81□□□□□ -1.32
YNL054W-AYNL054W-A SDH2P21801 266 aa6.81□□□□□ -1.32
YNL054W-AYNL054W-A NTH2P35172 780 aa6.81□□□□□ -1.32
YNL054W-AYNL054W-A ACF4P47129 309 aa6.81□□□□□ -1.32
YNL054W-AYNL054W-A ATE1P16639 503 aa6.8□□□□□ -1.32
YNL054W-AYNL054W-A ALD2P47771 506 aa6.8□□□□□ -1.32
YNL054W-AYNL054W-A BOI1P38041 980 aaKnown RBP6.79□□□□□ -1.32
YNL054W-AYNL054W-A QDR1P40475 563 aa6.79□□□□□ -1.32
YNL054W-AYNL054W-A NUT2Q06213 157 aa6.79□□□□□ -1.32
YNL054W-AYNL054W-A GYP1Q08484 637 aa6.79□□□□□ -1.32
YNL054W-AYNL054W-A FUR4P05316 633 aaKnown RBP6.78□□□□□ -1.32
YNL054W-AYNL054W-A RPS6AP0CX37 236 aaKnown RBP6.78□□□□□ -1.32
YNL054W-AYNL054W-A RPS6BP0CX38 236 aaPredicted RBP6.78□□□□□ -1.32
YNL054W-AYNL054W-A NGR1P32831 672 aaKnown RBP6.78□□□□□ -1.32
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms