RNA–Protein interactions for RNA: YMR038C

CCS1, Transcript of Copper chaperone for superoxide dismutase Sod1p, yeastyeast

Gene CCS1, Length 750 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCS1YMR038C ISM1P48526 1002 aa7.68□□□□□ -1.18
CCS1YMR038C KTR1P27810 393 aaKnown RBP7.67□□□□□ -1.18
CCS1YMR038C MET10P39692 1035 aa7.67□□□□□ -1.18
CCS1YMR038C YML082WQ04533 649 aaKnown RBP7.67□□□□□ -1.18
CCS1YMR038C CSN12P47130 423 aa7.66□□□□□ -1.18
CCS1YMR038C TYW1Q08960 810 aaKnown RBP7.66□□□□□ -1.18
CCS1YMR038C HST2P53686 357 aa7.65□□□□□ -1.18
CCS1YMR038C YMR196WQ04336 1088 aa7.65□□□□□ -1.18
CCS1YMR038C ERF2Q06551 359 aa7.65□□□□□ -1.18
CCS1YMR038C KEX2P13134 814 aa7.64□□□□□ -1.19
CCS1YMR038C SCJ1P25303 377 aa7.64□□□□□ -1.19
CCS1YMR038C DMA2P53924 522 aa7.64□□□□□ -1.19
CCS1YMR038C BUD20Q08004 166 aaPredicted RBP7.63□□□□□ -1.19
CCS1YMR038C MYO4P32492 1471 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-DR4O74302 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-HP0C2I4 478 aaKnown RBP7.62□□□□□ -1.19
CCS1YMR038C TY1A-AP0CX57 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-PR1P0CX58 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-ORP0CX59 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-PR2P0CX60 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-DR5P0CX65 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-ER2P0CX66 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-GR3P0CX67 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-LR1P0CX68 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-MR2P0CX69 440 aa7.62□□□□□ -1.19
CCS1YMR038C RTT106P40161 455 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-JR2P47099 440 aa7.62□□□□□ -1.19
CCS1YMR038C RTF1P53064 558 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-DR1Q03856 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-ML1Q04706 440 aaKnown RBP7.62□□□□□ -1.19
CCS1YMR038C TY1A-BRQ12217 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-NL2Q12470 440 aa7.62□□□□□ -1.19
CCS1YMR038C TY1A-GR2Q12485 440 aa7.62□□□□□ -1.19
CCS1YMR038C SNQ2P32568 1501 aaKnown RBP7.62□□□□□ -1.19
CCS1YMR038C DOP1Q03921 1698 aa7.61□□□□□ -1.19
CCS1YMR038C SEC2P17065 759 aa7.61□□□□□ -1.19
CCS1YMR038C GLN1P32288 370 aaKnown RBP7.61□□□□□ -1.19
CCS1YMR038C NPL4P33755 580 aa7.61□□□□□ -1.19
CCS1YMR038C YNL115CP53925 644 aa7.61□□□□□ -1.19
CCS1YMR038C HPC2Q01448 625 aa7.61□□□□□ -1.19
CCS1YMR038C MMP1Q12372 583 aa7.61□□□□□ -1.19
CCS1YMR038C SNT2P53127 1403 aa7.6□□□□□ -1.19
CCS1YMR038C ULS1Q08562 1619 aa7.6□□□□□ -1.19
CCS1YMR038C SSA2P10592 639 aaKnown RBP7.59□□□□□ -1.19
CCS1YMR038C ESS1P22696 170 aa7.59□□□□□ -1.19
CCS1YMR038C SPO14P36126 1683 aa7.59□□□□□ -1.19
CCS1YMR038C SLY41P22215 453 aa7.57□□□□□ -1.2
CCS1YMR038C YJU3P28321 313 aa7.57□□□□□ -1.2
CCS1YMR038C GCD11P32481 527 aaKnown RBP7.57□□□□□ -1.2
CCS1YMR038C TFB3Q03290 321 aa7.56□□□□□ -1.2
CCS1YMR038C PRT1P06103 763 aaKnown RBP7.55□□□□□ -1.2
CCS1YMR038C VRP1P37370 817 aa7.55□□□□□ -1.2
CCS1YMR038C PKH3Q03306 898 aaPredicted RBP7.55□□□□□ -1.2
CCS1YMR038C AGE1Q04412 482 aa7.54□□□□□ -1.2
CCS1YMR038C PDR10P51533 1564 aa7.53□□□□□ -1.2
CCS1YMR038C PKC1P24583 1151 aa7.52□□□□□ -1.21
CCS1YMR038C BCK2P33306 851 aa7.52□□□□□ -1.21
CCS1YMR038C TUB4P53378 473 aa7.52□□□□□ -1.21
CCS1YMR038C STH1P32597 1359 aa7.51□□□□□ -1.21
CCS1YMR038C RSC30P38781 883 aa7.51□□□□□ -1.21
CCS1YMR038C RAD59Q12223 238 aa7.51□□□□□ -1.21
CCS1YMR038C YTA7P40340 1379 aa7.5□□□□□ -1.21
CCS1YMR038C BRL1P38770 471 aa7.5□□□□□ -1.21
CCS1YMR038C TRM3Q07527 1436 aa7.5□□□□□ -1.21
CCS1YMR038C PDR12Q02785 1511 aa7.49□□□□□ -1.21
CCS1YMR038C TRM1P15565 570 aaKnown RBP7.49□□□□□ -1.21
CCS1YMR038C GYP1Q08484 637 aa7.49□□□□□ -1.21
CCS1YMR038C PAC1P39946 494 aaKnown RBP7.48□□□□□ -1.21
CCS1YMR038C RRN7P40992 514 aa7.48□□□□□ -1.21
CCS1YMR038C BUB1P41695 1021 aaKnown RBP RIP-Chip data7.48□□□□□ -1.21not detected
CCS1YMR038C PUS6P53294 404 aa7.48□□□□□ -1.21
CCS1YMR038C SAS4Q04003 481 aa7.48□□□□□ -1.21
CCS1YMR038C LAM6Q08001 693 aa7.48□□□□□ -1.21
CCS1YMR038C IQG1Q12280 1495 aa7.48□□□□□ -1.21
CCS1YMR038C MLP2P40457 1679 aa7.47□□□□□ -1.21
CCS1YMR038C ARG8P18544 423 aa7.47□□□□□ -1.21
CCS1YMR038C GDB1Q06625 1536 aa7.47□□□□□ -1.21
CCS1YMR038C SDH2P21801 266 aa7.45□□□□□ -1.22
CCS1YMR038C HGH1P48362 394 aaKnown RBP7.45□□□□□ -1.22
CCS1YMR038C NUP157P40064 1391 aaKnown RBP7.45□□□□□ -1.22
CCS1YMR038C BUD3P25558 1636 aa7.44□□□□□ -1.22
CCS1YMR038C SPT16P32558 1035 aaKnown RBP7.43□□□□□ -1.22
CCS1YMR038C XDJ1P39102 459 aa7.43□□□□□ -1.22
CCS1YMR038C TBF1Q02457 562 aa7.43□□□□□ -1.22
CCS1YMR038C YDL206WQ12424 762 aa7.43□□□□□ -1.22
CCS1YMR038C TAF7Q05021 590 aa7.42□□□□□ -1.22
CCS1YMR038C PDR15Q04182 1529 aaKnown RBP7.42□□□□□ -1.22
CCS1YMR038C PAT1P25644 796 aaKnown RBP7.41□□□□□ -1.22
CCS1YMR038C YAP3P38749 330 aa7.41□□□□□ -1.22
CCS1YMR038C DNF3Q12674 1656 aa7.41□□□□□ -1.22
CCS1YMR038C YBL036CP38197 257 aa7.4□□□□□ -1.22
CCS1YMR038C RPA14P50106 137 aa7.4□□□□□ -1.22
CCS1YMR038C PDC1P06169 563 aaKnown RBP7.39□□□□□ -1.23
CCS1YMR038C BIO2P32451 375 aa7.39□□□□□ -1.23
CCS1YMR038C MAK10Q02197 733 aa7.39□□□□□ -1.23
CCS1YMR038C ARO1P08566 1588 aaKnown RBP7.38□□□□□ -1.23
CCS1YMR038C MOD5P07884 428 aa7.38□□□□□ -1.23
CCS1YMR038C MAK16P10962 306 aaPredicted RBP7.38□□□□□ -1.23
CCS1YMR038C CSE4P36012 229 aa7.38□□□□□ -1.23
CCS1YMR038C CHC1P22137 1653 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms