RNA–Protein interactions for RNA: YLR455W

PDP3, Transcript of Component of the NuA3b histone acetyltransferase complex, yeastyeast

Gene PDP3, Length 915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDP3YLR455W YDR444WQ04093 687 aa5.72□□□□□ -1.49
PDP3YLR455W GUA1P38625 525 aaKnown RBP5.69□□□□□ -1.5
PDP3YLR455W LCB5Q06147 687 aaKnown RBP5.69□□□□□ -1.5
PDP3YLR455W RTT106P40161 455 aa5.68□□□□□ -1.5
PDP3YLR455W FIG4P42837 879 aa5.68□□□□□ -1.5
PDP3YLR455W PTK2P47116 818 aaKnown RBP5.68□□□□□ -1.5
PDP3YLR455W ITT1Q04638 464 aa5.68□□□□□ -1.5
PDP3YLR455W SRF1Q12516 437 aa5.68□□□□□ -1.5
PDP3YLR455W APP1P53933 587 aa5.67□□□□□ -1.5
PDP3YLR455W MAK16P10962 306 aaPredicted RBP5.65□□□□□ -1.5
PDP3YLR455W YBL086CP38177 466 aa5.65□□□□□ -1.5
PDP3YLR455W EMW1P42842 904 aaKnown RBP5.65□□□□□ -1.5
PDP3YLR455W TEC1P18412 486 aa5.64□□□□□ -1.51
PDP3YLR455W NUP85P46673 744 aa5.62□□□□□ -1.51
PDP3YLR455W HPC2Q01448 625 aa5.62□□□□□ -1.51
PDP3YLR455W YLR346CQ06139 101 aa5.62□□□□□ -1.51
PDP3YLR455W OPT2Q06593 877 aa5.62□□□□□ -1.51
PDP3YLR455W YPR084WQ06821 456 aa5.62□□□□□ -1.51
PDP3YLR455W ARG82P07250 355 aa5.61□□□□□ -1.51
PDP3YLR455W YDL176WQ12027 708 aa5.61□□□□□ -1.51
PDP3YLR455W CSE4P36012 229 aa5.6□□□□□ -1.51
PDP3YLR455W AAD14P42884 376 aa5.6□□□□□ -1.51
PDP3YLR455W NAF1P53919 492 aaKnown RBP5.6□□□□□ -1.51
PDP3YLR455W GUT2P32191 649 aa5.59□□□□□ -1.51
PDP3YLR455W MKS1P34072 584 aa5.59□□□□□ -1.51
PDP3YLR455W BRL1P38770 471 aa5.59□□□□□ -1.51
PDP3YLR455W GLY1P37303 387 aaKnown RBP5.57□□□□□ -1.52
PDP3YLR455W YBL036CP38197 257 aa5.57□□□□□ -1.52
PDP3YLR455W LSC2P53312 427 aa5.57□□□□□ -1.52
PDP3YLR455W TFB3Q03290 321 aa5.57□□□□□ -1.52
PDP3YLR455W DFG5Q05031 458 aa5.57□□□□□ -1.52
PDP3YLR455W MIP1P15801 1254 aa5.56□□□□□ -1.52
PDP3YLR455W FBP26P32604 452 aa5.56□□□□□ -1.52
PDP3YLR455W CAF120P53836 1060 aa5.56□□□□□ -1.52
PDP3YLR455W STE20Q03497 939 aaKnown RBP5.56□□□□□ -1.52
PDP3YLR455W FRA1Q07825 749 aa5.56□□□□□ -1.52
PDP3YLR455W PKC1P24583 1151 aa5.55□□□□□ -1.52
PDP3YLR455W DLD1P32891 587 aa5.55□□□□□ -1.52
PDP3YLR455W ACO2P39533 789 aa5.55□□□□□ -1.52
PDP3YLR455W SCW11P53189 542 aa5.55□□□□□ -1.52
PDP3YLR455W BDS1Q08347 646 aa5.55□□□□□ -1.52
PDP3YLR455W SPT5P27692 1063 aaKnown RBP5.54□□□□□ -1.52
PDP3YLR455W YJR098CP47139 656 aa5.54□□□□□ -1.52
PDP3YLR455W ATG20Q07528 640 aa5.54□□□□□ -1.52
PDP3YLR455W TY1A-BLQ12266 440 aa5.54□□□□□ -1.52
PDP3YLR455W UBP2Q01476 1272 aa5.53□□□□□ -1.52
PDP3YLR455W STE6P12866 1290 aa5.52□□□□□ -1.53
PDP3YLR455W YDJ1P25491 409 aaKnown RBP5.52□□□□□ -1.53
PDP3YLR455W EMP47P43555 445 aa5.52□□□□□ -1.53
PDP3YLR455W HGH1P48362 394 aaKnown RBP5.52□□□□□ -1.53
PDP3YLR455W MCM16Q12262 181 aa5.52□□□□□ -1.53
PDP3YLR455W TCB1Q12466 1186 aa5.52□□□□□ -1.53
PDP3YLR455W ISF1P32488 338 aa5.51□□□□□ -1.53
PDP3YLR455W MRX12P47084 519 aa5.51□□□□□ -1.53
PDP3YLR455W ISU1Q03020 165 aa5.51□□□□□ -1.53
PDP3YLR455W YIR007WP40566 764 aa5.5□□□□□ -1.53
PDP3YLR455W DMA2P53924 522 aa5.5□□□□□ -1.53
PDP3YLR455W BIO2P32451 375 aa5.49□□□□□ -1.53
PDP3YLR455W APL6P46682 809 aa5.48□□□□□ -1.53
PDP3YLR455W RPP2BP02400 110 aaKnown RBP5.47□□□□□ -1.53
PDP3YLR455W OSH7P38755 437 aa5.47□□□□□ -1.53
PDP3YLR455W ISR1Q06098 443 aaKnown RBP5.47□□□□□ -1.53
PDP3YLR455W SUP45P12385 437 aaKnown RBP5.46□□□□□ -1.54
PDP3YLR455W YNL108CP53929 270 aa5.46□□□□□ -1.54
PDP3YLR455W DLD3P39976 496 aaKnown RBP5.45□□□□□ -1.54
PDP3YLR455W ROG3P43602 733 aa5.45□□□□□ -1.54
PDP3YLR455W YPP1P46951 817 aa5.45□□□□□ -1.54
PDP3YLR455W YJL007CP47080 104 aa5.44□□□□□ -1.54
PDP3YLR455W ENO2P00925 437 aaKnown RBP5.43□□□□□ -1.54
PDP3YLR455W HAL5P38970 855 aaKnown RBP5.43□□□□□ -1.54
PDP3YLR455W VTC4P47075 721 aa5.43□□□□□ -1.54
PDP3YLR455W YGR035CP53222 116 aa5.43□□□□□ -1.54
PDP3YLR455W TY1A-MR1Q04215 440 aa5.43□□□□□ -1.54
PDP3YLR455W HPF1Q05164 967 aa5.43□□□□□ -1.54
PDP3YLR455W WTM2Q12206 467 aa5.43□□□□□ -1.54
PDP3YLR455W SPT2P06843 333 aaPredicted RBP5.42□□□□□ -1.54
PDP3YLR455W DAT1P13483 248 aaKnown RBP5.42□□□□□ -1.54
PDP3YLR455W UTR2P32623 467 aa5.42□□□□□ -1.54
PDP3YLR455W SOH1P38633 127 aa5.42□□□□□ -1.54
PDP3YLR455W ATG3P40344 310 aa5.42□□□□□ -1.54
PDP3YLR455W CDC19P00549 500 aaKnown RBP5.41□□□□□ -1.54
PDP3YLR455W UTP13Q05946 817 aaKnown RBP5.41□□□□□ -1.54
PDP3YLR455W TRK2P28584 889 aa5.4□□□□□ -1.54
PDP3YLR455W DAL1P32375 460 aa5.4□□□□□ -1.54
PDP3YLR455W RIM21P48565 533 aa5.4□□□□□ -1.54
PDP3YLR455W CCP1P00431 361 aa5.39□□□□□ -1.55
PDP3YLR455W TBS1P38114 1094 aa5.39□□□□□ -1.55
PDP3YLR455W BIM1P40013 344 aa5.39□□□□□ -1.55
PDP3YLR455W NAM8Q00539 523 aaKnown RBP5.39□□□□□ -1.55
PDP3YLR455W TAF7Q05021 590 aa5.39□□□□□ -1.55
PDP3YLR455W SSN3P39073 555 aa5.38□□□□□ -1.55
PDP3YLR455W MSN5P52918 1224 aa5.38□□□□□ -1.55
PDP3YLR455W HDA3Q06623 655 aa5.38□□□□□ -1.55
PDP3YLR455W UTP7P40055 554 aaKnown RBP5.37□□□□□ -1.55
PDP3YLR455W ATG32P40458 529 aa5.37□□□□□ -1.55
PDP3YLR455W TIF1P10081 395 aaKnown RBP5.36□□□□□ -1.55
PDP3YLR455W RDS2P19541 446 aaKnown RBP5.36□□□□□ -1.55
PDP3YLR455W SLX8P40072 274 aa5.36□□□□□ -1.55
PDP3YLR455W SLA1P32790 1244 aa5.35□□□□□ -1.55
PDP3YLR455W CBC2Q08920 208 aaKnown RBP RIP-Chip data5.35□□□□□ -1.55not detected
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms