RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C RRN7P40992 514 aa10.2□□□□□ -0.78
ATG17YLR423C PAC1P39946 494 aaKnown RBP10.18□□□□□ -0.78
ATG17YLR423C MRX12P47084 519 aa10.18□□□□□ -0.78
ATG17YLR423C FIG4P42837 879 aa10.17□□□□□ -0.78
ATG17YLR423C HAT1Q12341 374 aa10.17□□□□□ -0.78
ATG17YLR423C PDC1P06169 563 aaKnown RBP10.16□□□□□ -0.78
ATG17YLR423C SPT16P32558 1035 aaKnown RBP10.16□□□□□ -0.78
ATG17YLR423C UBX7P38349 436 aa10.16□□□□□ -0.78
ATG17YLR423C GAL2P13181 574 aa10.15□□□□□ -0.78
ATG17YLR423C FRA1Q07825 749 aa10.15□□□□□ -0.78
ATG17YLR423C SSF1P38789 453 aaPredicted RBP10.13□□□□□ -0.79
ATG17YLR423C YPR015CQ12531 247 aa10.12□□□□□ -0.79
ATG17YLR423C SOH1P38633 127 aa10.11□□□□□ -0.79
ATG17YLR423C HXT10P43581 546 aa10.11□□□□□ -0.79
ATG17YLR423C AIR2Q12476 344 aaKnown RBP10.11□□□□□ -0.79
ATG17YLR423C BUD31P25337 157 aaPredicted RBP10.09□□□□□ -0.79
ATG17YLR423C YML082WQ04533 649 aaKnown RBP10.09□□□□□ -0.79
ATG17YLR423C PRE3P38624 215 aa10.08□□□□□ -0.8
ATG17YLR423C YPR084WQ06821 456 aa10.08□□□□□ -0.8
ATG17YLR423C BMT6Q12291 365 aa10.08□□□□□ -0.8
ATG17YLR423C PHO87P25360 923 aa10.07□□□□□ -0.8
ATG17YLR423C YJL171CP46992 396 aa10.07□□□□□ -0.8
ATG17YLR423C UTP13Q05946 817 aaKnown RBP10.07□□□□□ -0.8
ATG17YLR423C GYP1Q08484 637 aa10.07□□□□□ -0.8
ATG17YLR423C YEL077CQ3E7X8 1277 aa10.07□□□□□ -0.8
ATG17YLR423C HAP4P14064 554 aa10.06□□□□□ -0.8
ATG17YLR423C VAC17P25591 423 aa10.04□□□□□ -0.8
ATG17YLR423C RRD1P40454 393 aaKnown RBP10.04□□□□□ -0.8
ATG17YLR423C TPD3P31383 635 aa10.02□□□□□ -0.81
ATG17YLR423C CHL1P22516 861 aaPredicted RBP10.01□□□□□ -0.81
ATG17YLR423C ACS2P52910 683 aaKnown RBP10.01□□□□□ -0.81
ATG17YLR423C SAS4Q04003 481 aa10.01□□□□□ -0.81
ATG17YLR423C PUF6Q04373 656 aaKnown RBP10.01□□□□□ -0.81
ATG17YLR423C KAR5Q04746 504 aa10.01□□□□□ -0.81
ATG17YLR423C APL6P46682 809 aa10□□□□□ -0.81
ATG17YLR423C YBL113CQ7M4S9 792 aa10□□□□□ -0.81
ATG17YLR423C PDI1P17967 522 aaKnown RBP9.99□□□□□ -0.81
ATG17YLR423C KIP2P28743 706 aa9.99□□□□□ -0.81
ATG17YLR423C ISR1Q06098 443 aaKnown RBP9.99□□□□□ -0.81
ATG17YLR423C TSC13Q99190 310 aa9.99□□□□□ -0.81
ATG17YLR423C HEM3P28789 327 aa9.98□□□□□ -0.81
ATG17YLR423C IXR1P33417 597 aa9.98□□□□□ -0.81
ATG17YLR423C STM1P39015 273 aaKnown RBP9.98□□□□□ -0.81
ATG17YLR423C YFL034WP43564 1073 aa9.98□□□□□ -0.81
ATG17YLR423C GAS4Q08271 471 aa9.98□□□□□ -0.81
ATG17YLR423C SEN54Q02825 467 aaPredicted RBP9.97□□□□□ -0.81
ATG17YLR423C MIP1P15801 1254 aa9.96□□□□□ -0.82
ATG17YLR423C CBC2Q08920 208 aaKnown RBP RIP-Chip data9.96□□□□□ -0.82not detected
ATG17YLR423C ROM1P53046 1155 aa9.95□□□□□ -0.82
ATG17YLR423C NOP7P53261 605 aaKnown RBP9.95□□□□□ -0.82
ATG17YLR423C CWC15Q03772 175 aaKnown RBP9.95□□□□□ -0.82
ATG17YLR423C ITT1Q04638 464 aa9.95□□□□□ -0.82
ATG17YLR423C PUN1Q06991 263 aa9.95□□□□□ -0.82
ATG17YLR423C ATG20Q07528 640 aa9.95□□□□□ -0.82
ATG17YLR423C MOD5P07884 428 aa9.94□□□□□ -0.82
ATG17YLR423C VAN1P23642 535 aa9.94□□□□□ -0.82
ATG17YLR423C MRF1P30775 413 aaPredicted RBP9.94□□□□□ -0.82
ATG17YLR423C SNU71P53207 620 aaKnown RBP9.94□□□□□ -0.82
ATG17YLR423C TPS3P38426 1054 aaKnown RBP9.93□□□□□ -0.82
ATG17YLR423C ERP5P38819 212 aa9.93□□□□□ -0.82
ATG17YLR423C PNP1Q05788 311 aa9.93□□□□□ -0.82
ATG17YLR423C SEC20P28791 383 aa9.92□□□□□ -0.82
ATG17YLR423C AIM9P40053 627 aaKnown RBP9.92□□□□□ -0.82
ATG17YLR423C GRS1P38088 690 aaKnown RBP9.91□□□□□ -0.82
ATG17YLR423C HAL5P38970 855 aaKnown RBP9.91□□□□□ -0.82
ATG17YLR423C TRS33Q99394 268 aa9.91□□□□□ -0.82
ATG17YLR423C FUR4P05316 633 aaKnown RBP9.9□□□□□ -0.82
ATG17YLR423C SRS2P12954 1174 aa9.9□□□□□ -0.82
ATG17YLR423C SIS1P25294 352 aaKnown RBP9.9□□□□□ -0.82
ATG17YLR423C IPL1P38991 367 aa9.89□□□□□ -0.83
ATG17YLR423C HDA3Q06623 655 aa9.89□□□□□ -0.83
ATG17YLR423C SYH1Q02875 849 aaKnown RBP9.88□□□□□ -0.83
ATG17YLR423C NTH2P35172 780 aa9.87□□□□□ -0.83
ATG17YLR423C APP1P53933 587 aa9.87□□□□□ -0.83
ATG17YLR423C PUS5Q06244 254 aa9.87□□□□□ -0.83
ATG17YLR423C CWH41P53008 833 aa9.86□□□□□ -0.83
ATG17YLR423C ASF1P32447 279 aa9.85□□□□□ -0.83
ATG17YLR423C RRN6P32786 894 aa9.85□□□□□ -0.83
ATG17YLR423C MSC6Q08818 692 aaKnown RBP9.85□□□□□ -0.83
ATG17YLR423C FRK1Q03002 865 aaPredicted RBP9.84□□□□□ -0.83
ATG17YLR423C GLO3P38682 493 aaKnown RBP9.83□□□□□ -0.84
ATG17YLR423C YHL050CP38721 697 aa9.83□□□□□ -0.84
ATG17YLR423C YHR219WP38900 624 aa9.83□□□□□ -0.84
ATG17YLR423C BDP1P46678 594 aa9.83□□□□□ -0.84
ATG17YLR423C UTR2P32623 467 aa9.82□□□□□ -0.84
ATG17YLR423C BOL3P39724 118 aa9.82□□□□□ -0.84
ATG17YLR423C EMW1P42842 904 aaKnown RBP9.82□□□□□ -0.84
ATG17YLR423C ALD4P46367 519 aaKnown RBP9.82□□□□□ -0.84
ATG17YLR423C ATG1P53104 897 aa9.82□□□□□ -0.84
ATG17YLR423C CYT1P07143 309 aa9.81□□□□□ -0.84
ATG17YLR423C TRL1P09880 827 aaKnown RBP9.81□□□□□ -0.84
ATG17YLR423C RPS6AP0CX37 236 aaKnown RBP9.81□□□□□ -0.84
ATG17YLR423C RPS6BP0CX38 236 aaPredicted RBP9.81□□□□□ -0.84
ATG17YLR423C DAT1P13483 248 aaKnown RBP9.81□□□□□ -0.84
ATG17YLR423C TBS1P38114 1094 aa9.81□□□□□ -0.84
ATG17YLR423C THI12P42883 340 aa9.81□□□□□ -0.84
ATG17YLR423C THI5P43534 340 aa9.81□□□□□ -0.84
ATG17YLR423C THI11P47183 340 aa9.81□□□□□ -0.84
ATG17YLR423C THI13Q07748 340 aa9.81□□□□□ -0.84
ATG17YLR423C MKS1P34072 584 aa9.8□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 36.9 ms