RNA–Protein interactions for RNA: YLR383W

SMC6, Transcript of Component of the SMC5-SMC6 complex, yeastyeast

Gene SMC6, Length 3,345 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMC6YLR383W GTT3P39996 337 aa3.31□□□□□ -1.88
SMC6YLR383W NAP1P25293 417 aaKnown RBP3.3□□□□□ -1.88
SMC6YLR383W IES2P40154 320 aa3.3□□□□□ -1.88
SMC6YLR383W YMR1P47147 688 aaKnown RBP RIP-Chip data3.3□□□□□ -1.88not detected
SMC6YLR383W YEF3P16521 1044 aaKnown RBP3.29□□□□□ -1.88
SMC6YLR383W PTC3P34221 468 aaKnown RBP3.29□□□□□ -1.88
SMC6YLR383W SOL3P38858 249 aa3.29□□□□□ -1.88
SMC6YLR383W REF2P42073 533 aaPredicted RBP3.29□□□□□ -1.88
SMC6YLR383W NOP7P53261 605 aaKnown RBP3.29□□□□□ -1.88
SMC6YLR383W MAM3Q12296 706 aa3.29□□□□□ -1.88
SMC6YLR383W NSR1P27476 414 aaKnown RBP RIP-Chip data3.28□□□□□ -1.88not detected
SMC6YLR383W GRX4P32642 244 aa3.28□□□□□ -1.88
SMC6YLR383W THI12P42883 340 aa3.28□□□□□ -1.88
SMC6YLR383W THI5P43534 340 aa3.28□□□□□ -1.88
SMC6YLR383W THI11P47183 340 aa3.28□□□□□ -1.88
SMC6YLR383W THI13Q07748 340 aa3.28□□□□□ -1.88
SMC6YLR383W DBP1P24784 617 aaKnown RBP3.28□□□□□ -1.88
SMC6YLR383W AIM44Q99299 758 aa3.28□□□□□ -1.88
SMC6YLR383W GLN1P32288 370 aaKnown RBP3.27□□□□□ -1.89
SMC6YLR383W DUR1,2P32528 1835 aaKnown RBP3.27□□□□□ -1.89
SMC6YLR383W YLR326WQ06170 240 aaKnown RBP3.27□□□□□ -1.89
SMC6YLR383W KTR1P27810 393 aaKnown RBP3.27□□□□□ -1.89
SMC6YLR383W YJR008WP47085 338 aa3.27□□□□□ -1.89
SMC6YLR383W HPC2Q01448 625 aa3.27□□□□□ -1.89
SMC6YLR383W NOP8Q08287 484 aaPredicted RBP3.27□□□□□ -1.89
SMC6YLR383W PKC1P24583 1151 aa3.26□□□□□ -1.89
SMC6YLR383W SPE2P21182 396 aa3.25□□□□□ -1.89
SMC6YLR383W SIS1P25294 352 aaKnown RBP3.25□□□□□ -1.89
SMC6YLR383W MAK21Q12176 1025 aaKnown RBP3.25□□□□□ -1.89
SMC6YLR383W SSK22P25390 1331 aaPredicted RBP3.25□□□□□ -1.89
SMC6YLR383W TFB3Q03290 321 aa3.24□□□□□ -1.89
SMC6YLR383W GAP1P19145 602 aaPredicted RBP3.24□□□□□ -1.89
SMC6YLR383W PPH3P32345 308 aa3.24□□□□□ -1.89
SMC6YLR383W PCS60P38137 543 aaKnown RBP RIP-Chip data3.24□□□□□ -1.89 RIP-Chip
SMC6YLR383W YRB30P53107 440 aaPredicted RBP3.24□□□□□ -1.89
SMC6YLR383W LEU2P04173 364 aaPredicted RBP3.23□□□□□ -1.89
SMC6YLR383W BUD31P25337 157 aaPredicted RBP3.23□□□□□ -1.89
SMC6YLR383W SLM3Q12093 417 aa3.23□□□□□ -1.89
SMC6YLR383W VMA1P17255 1071 aaKnown RBP3.23□□□□□ -1.89
SMC6YLR383W ORC6P38826 435 aa3.23□□□□□ -1.89
SMC6YLR383W MRX12P47084 519 aa3.23□□□□□ -1.89
SMC6YLR383W SLX5P32828 619 aaKnown RBP3.22□□□□□ -1.89
SMC6YLR383W CAB1Q04430 367 aa3.22□□□□□ -1.89
SMC6YLR383W YMR074CQ04773 145 aa3.22□□□□□ -1.89
SMC6YLR383W SUB2Q07478 446 aaKnown RBP3.22□□□□□ -1.89
SMC6YLR383W YOR238WQ08634 303 aa3.22□□□□□ -1.89
SMC6YLR383W RIA1P53893 1110 aa3.22□□□□□ -1.89
SMC6YLR383W ORC1P54784 914 aaPredicted RBP3.22□□□□□ -1.89
SMC6YLR383W YGR273CP53329 174 aa3.21□□□□□ -1.9
SMC6YLR383W TAF8Q03750 510 aa3.21□□□□□ -1.9
SMC6YLR383W SAM3Q08986 587 aa3.21□□□□□ -1.9
SMC6YLR383W MST1P07236 462 aa3.21□□□□□ -1.9
SMC6YLR383W ILV3P39522 585 aaKnown RBP3.21□□□□□ -1.9
SMC6YLR383W VHR2P40041 505 aa3.21□□□□□ -1.9
SMC6YLR383W RPS9BP05755 195 aaKnown RBP3.21□□□□□ -1.9
SMC6YLR383W KEX1P09620 729 aa3.2□□□□□ -1.9
SMC6YLR383W PSE1P32337 1089 aaKnown RBP3.2□□□□□ -1.9
SMC6YLR383W POL5P39985 1022 aaKnown RBP3.2□□□□□ -1.9
SMC6YLR383W ATG32P40458 529 aa3.19□□□□□ -1.9
SMC6YLR383W HGH1P48362 394 aaKnown RBP3.19□□□□□ -1.9
SMC6YLR383W PDI1P17967 522 aaKnown RBP3.19□□□□□ -1.9
SMC6YLR383W RGR1P19263 1082 aa3.18□□□□□ -1.9
SMC6YLR383W YML020WQ03722 664 aa3.18□□□□□ -1.9
SMC6YLR383W GUT1P32190 709 aa3.18□□□□□ -1.9
SMC6YLR383W BIM1P40013 344 aa3.18□□□□□ -1.9
SMC6YLR383W NUP145P49687 1317 aa3.17□□□□□ -1.9
SMC6YLR383W ERG12P07277 443 aa3.17□□□□□ -1.9
SMC6YLR383W BIO2P32451 375 aa3.17□□□□□ -1.9
SMC6YLR383W TAF5P38129 798 aa3.17□□□□□ -1.9
SMC6YLR383W NOB1Q08444 459 aaKnown RBP3.17□□□□□ -1.9
SMC6YLR383W SAC3P46674 1301 aa3.17□□□□□ -1.9
SMC6YLR383W PRP5P21372 849 aaPredicted RBP3.17□□□□□ -1.9
SMC6YLR383W KIP3P53086 805 aaKnown RBP3.17□□□□□ -1.9
SMC6YLR383W MDG1P53885 366 aa3.17□□□□□ -1.9
SMC6YLR383W YNL050CP53952 270 aa3.17□□□□□ -1.9
SMC6YLR383W PIB1Q06651 286 aa3.17□□□□□ -1.9
SMC6YLR383W YKR075CP36155 307 aa3.16□□□□□ -1.9
SMC6YLR383W MVP1P40959 511 aaKnown RBP3.16□□□□□ -1.9
SMC6YLR383W RAD4P14736 754 aa3.16□□□□□ -1.9
SMC6YLR383W RSC30P38781 883 aa3.16□□□□□ -1.9
SMC6YLR383W MAM1P40065 302 aa3.16□□□□□ -1.9
SMC6YLR383W NIS1P53939 407 aa3.16□□□□□ -1.9
SMC6YLR383W TIF1P10081 395 aaKnown RBP3.16□□□□□ -1.9
SMC6YLR383W RTF1P53064 558 aa3.16□□□□□ -1.9
SMC6YLR383W ENP1P38333 483 aaKnown RBP3.15□□□□□ -1.9
SMC6YLR383W TGL3P40308 642 aa3.15□□□□□ -1.9
SMC6YLR383W RCM1P53972 490 aa3.15□□□□□ -1.9
SMC6YLR383W ENV9Q08651 330 aa3.15□□□□□ -1.9
SMC6YLR383W TYW1Q08960 810 aaKnown RBP3.15□□□□□ -1.9
SMC6YLR383W GEF1P37020 779 aa3.15□□□□□ -1.91
SMC6YLR383W CSN12P47130 423 aa3.15□□□□□ -1.91
SMC6YLR383W PDS5Q04264 1277 aa3.15□□□□□ -1.91
SMC6YLR383W IMH1Q06704 911 aaKnown RBP3.15□□□□□ -1.91
SMC6YLR383W TCB1Q12466 1186 aa3.15□□□□□ -1.91
SMC6YLR383W SUP45P12385 437 aaKnown RBP3.14□□□□□ -1.91
SMC6YLR383W YAP5P40574 245 aa3.14□□□□□ -1.91
SMC6YLR383W UTP22P53254 1237 aaPredicted RBP3.14□□□□□ -1.91
SMC6YLR383W RRP46P53256 223 aaPredicted RBP3.14□□□□□ -1.91
SMC6YLR383W ATF2P53296 535 aa3.14□□□□□ -1.91
SMC6YLR383W HEF3P53978 1044 aaKnown RBP3.14□□□□□ -1.91
Retrieved 100 of 5,963 RNA–protein pairs in 93.5 ms