RNA–Protein interactions for RNA: YKR088C

TVP38, Transcript of Integral membrane protein, yeastyeast

Gene TVP38, Length 1,014 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TVP38YKR088C TY1A-BLQ12266 440 aa8.36□□□□□ -1.07
TVP38YKR088C ARG82P07250 355 aa8.35□□□□□ -1.07
TVP38YKR088C LSC2P53312 427 aa8.34□□□□□ -1.07
TVP38YKR088C ESS1P22696 170 aa8.33□□□□□ -1.08
TVP38YKR088C VAC17P25591 423 aa8.33□□□□□ -1.08
TVP38YKR088C UBP2Q01476 1272 aa8.33□□□□□ -1.08
TVP38YKR088C HPF1Q05164 967 aa8.32□□□□□ -1.08
TVP38YKR088C AAD14P42884 376 aa8.31□□□□□ -1.08
TVP38YKR088C YBL086CP38177 466 aa8.29□□□□□ -1.08
TVP38YKR088C YJU3P28321 313 aa8.27□□□□□ -1.09
TVP38YKR088C YJR098CP47139 656 aa8.25□□□□□ -1.09
TVP38YKR088C APP1P53933 587 aa8.25□□□□□ -1.09
TVP38YKR088C DLD1P32891 587 aa8.24□□□□□ -1.09
TVP38YKR088C EMW1P42842 904 aaKnown RBP8.23□□□□□ -1.09
TVP38YKR088C TCB1Q12466 1186 aa8.23□□□□□ -1.09
TVP38YKR088C RSC30P38781 883 aa8.22□□□□□ -1.09
TVP38YKR088C YNR021WP53723 404 aaKnown RBP8.22□□□□□ -1.09
TVP38YKR088C YPR204WQ08995 1032 aa8.22□□□□□ -1.09
TVP38YKR088C GLC3P32775 704 aa8.2□□□□□ -1.1
TVP38YKR088C PKH3Q03306 898 aaPredicted RBP8.2□□□□□ -1.1
TVP38YKR088C ITT1Q04638 464 aa8.2□□□□□ -1.1
TVP38YKR088C ARG8P18544 423 aa8.18□□□□□ -1.1
TVP38YKR088C OSH7P38755 437 aa8.18□□□□□ -1.1
TVP38YKR088C ROG3P43602 733 aa8.18□□□□□ -1.1
TVP38YKR088C DPH6Q12429 685 aa8.17□□□□□ -1.1
TVP38YKR088C TY1A-MR1Q04215 440 aa8.16□□□□□ -1.1
TVP38YKR088C MKS1P34072 584 aa8.15□□□□□ -1.1
TVP38YKR088C ICP55P40051 511 aa8.15□□□□□ -1.1
TVP38YKR088C KTR1P27810 393 aaKnown RBP8.13□□□□□ -1.11
TVP38YKR088C FIG4P42837 879 aa8.13□□□□□ -1.11
TVP38YKR088C DFG5Q05031 458 aa8.13□□□□□ -1.11
TVP38YKR088C PUS1Q12211 544 aaKnown RBP8.12□□□□□ -1.11
TVP38YKR088C LYS5P50113 272 aa8.11□□□□□ -1.11
TVP38YKR088C CSN12P47130 423 aa8.1□□□□□ -1.11
TVP38YKR088C BDS1Q08347 646 aa8.1□□□□□ -1.11
TVP38YKR088C AIM7Q12156 149 aa8.09□□□□□ -1.11
TVP38YKR088C CCP1P00431 361 aa8.08□□□□□ -1.12
TVP38YKR088C TEC1P18412 486 aa8.07□□□□□ -1.12
TVP38YKR088C PHM7Q12252 991 aa8.06□□□□□ -1.12
TVP38YKR088C FBP26P32604 452 aa8.05□□□□□ -1.12
TVP38YKR088C RAD59Q12223 238 aa8.04□□□□□ -1.12
TVP38YKR088C LSB3P43603 459 aaKnown RBP8.03□□□□□ -1.12
TVP38YKR088C JJJ3P47138 172 aa8.03□□□□□ -1.12
TVP38YKR088C CDC19P00549 500 aaKnown RBP8.01□□□□□ -1.13
TVP38YKR088C STE6P12866 1290 aa8.01□□□□□ -1.13
TVP38YKR088C NAM8Q00539 523 aaKnown RBP8□□□□□ -1.13
TVP38YKR088C MDJ1P35191 511 aa7.99□□□□□ -1.13
TVP38YKR088C VTC4P47075 721 aa7.99□□□□□ -1.13
TVP38YKR088C YPR084WQ06821 456 aa7.99□□□□□ -1.13
TVP38YKR088C GUT2P32191 649 aa7.97□□□□□ -1.13
TVP38YKR088C NSG2P53898 299 aa7.97□□□□□ -1.13
TVP38YKR088C RPP2BP02400 110 aaKnown RBP7.95□□□□□ -1.14
TVP38YKR088C ISU1Q03020 165 aa7.95□□□□□ -1.14
TVP38YKR088C ATG20Q07528 640 aa7.95□□□□□ -1.14
TVP38YKR088C DLD3P39976 496 aaKnown RBP7.94□□□□□ -1.14
TVP38YKR088C DAL1P32375 460 aa7.93□□□□□ -1.14
TVP38YKR088C CUZ1P53899 274 aa7.93□□□□□ -1.14
TVP38YKR088C AI1P03875 834 aa7.92□□□□□ -1.14
TVP38YKR088C MAK16P10962 306 aaPredicted RBP7.92□□□□□ -1.14
TVP38YKR088C CEM1P39525 442 aa7.92□□□□□ -1.14
TVP38YKR088C THI72Q08579 599 aa7.92□□□□□ -1.14
TVP38YKR088C SSA2P10592 639 aaKnown RBP7.91□□□□□ -1.14
TVP38YKR088C STE20Q03497 939 aaKnown RBP7.89□□□□□ -1.15
TVP38YKR088C NAF1P53919 492 aaKnown RBP7.88□□□□□ -1.15
TVP38YKR088C FRA1Q07825 749 aa7.87□□□□□ -1.15
TVP38YKR088C YFL066CP43538 392 aa7.85□□□□□ -1.15
TVP38YKR088C UBP15P50101 1230 aa7.84□□□□□ -1.15
TVP38YKR088C YMR265CQ03508 461 aaKnown RBP7.84□□□□□ -1.15
TVP38YKR088C ADE12P80210 433 aaKnown RBP7.83□□□□□ -1.16
TVP38YKR088C DIT1P21623 536 aa7.82□□□□□ -1.16
TVP38YKR088C MSN5P52918 1224 aa7.82□□□□□ -1.16
TVP38YKR088C CCT8P47079 568 aaKnown RBP7.81□□□□□ -1.16
TVP38YKR088C SYT1Q06836 1226 aa7.8□□□□□ -1.16
TVP38YKR088C WTM2Q12206 467 aa7.8□□□□□ -1.16
TVP38YKR088C YPR053CQ6Q5F3 151 aa7.8□□□□□ -1.16
TVP38YKR088C KRE33P53914 1056 aaKnown RBP7.79□□□□□ -1.16
TVP38YKR088C DAT1P13483 248 aaKnown RBP7.78□□□□□ -1.16
TVP38YKR088C SSN3P39073 555 aa7.78□□□□□ -1.16
TVP38YKR088C MRX12P47084 519 aa7.78□□□□□ -1.16
TVP38YKR088C NRD1P53617 575 aaKnown RBP RIP-Chip data7.78□□□□□ -1.16not detected
TVP38YKR088C KIN1P13185 1064 aa7.77□□□□□ -1.17
TVP38YKR088C AHP1P38013 176 aaKnown RBP7.77□□□□□ -1.17
TVP38YKR088C ISR1Q06098 443 aaKnown RBP7.77□□□□□ -1.17
TVP38YKR088C YDR461C-AQ2V2P7 80 aa7.77□□□□□ -1.17
TVP38YKR088C UTR2P32623 467 aa7.76□□□□□ -1.17
TVP38YKR088C SLA1P32790 1244 aa7.76□□□□□ -1.17
TVP38YKR088C CSE4P36012 229 aa7.76□□□□□ -1.17
TVP38YKR088C SPT2P06843 333 aaPredicted RBP7.75□□□□□ -1.17
TVP38YKR088C EMP47P43555 445 aa7.75□□□□□ -1.17
TVP38YKR088C TBS1P38114 1094 aa7.74□□□□□ -1.17
TVP38YKR088C SBP1P10080 294 aaKnown RBP7.73□□□□□ -1.17
TVP38YKR088C SBE2P42223 864 aaKnown RBP7.72□□□□□ -1.17
TVP38YKR088C YMR187CQ03236 431 aa7.72□□□□□ -1.17
TVP38YKR088C TDA6Q06466 467 aa7.72□□□□□ -1.17
TVP38YKR088C TY1A-DR3Q12441 440 aa7.72□□□□□ -1.17
TVP38YKR088C SPT5P27692 1063 aaKnown RBP7.71□□□□□ -1.18
TVP38YKR088C APL6P46682 809 aa7.71□□□□□ -1.18
TVP38YKR088C ISF1P32488 338 aa7.7□□□□□ -1.18
TVP38YKR088C SKN7P38889 622 aa7.7□□□□□ -1.18
TVP38YKR088C ALA1P40825 983 aaKnown RBP7.7□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms