RNA–Protein interactions for RNA: YKL146W

AVT3, Transcript of Vacuolar transporter, yeastyeast

Gene AVT3, Length 2,079 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
AVT3YKL146W AOS1Q06624 347 aa6.48□□□□□ -1.37
AVT3YKL146W YKL133CP36066 463 aa6.48□□□□□ -1.37
AVT3YKL146W YIL055CP40523 627 aaKnown RBP6.48□□□□□ -1.37
AVT3YKL146W YRB30P53107 440 aaPredicted RBP6.48□□□□□ -1.37
AVT3YKL146W YNL050CP53952 270 aa6.48□□□□□ -1.37
AVT3YKL146W MEC3Q02574 474 aa6.48□□□□□ -1.37
AVT3YKL146W RTT109Q07794 436 aa6.48□□□□□ -1.37
AVT3YKL146W ZDS1P50111 915 aaKnown RBP6.46□□□□□ -1.37
AVT3YKL146W HEF3P53978 1044 aaKnown RBP6.46□□□□□ -1.37
AVT3YKL146W FUN12P39730 1002 aaKnown RBP6.45□□□□□ -1.38
AVT3YKL146W INP54Q08227 384 aaKnown RBP6.45□□□□□ -1.38
AVT3YKL146W ROM2P51862 1356 aaKnown RBP6.45□□□□□ -1.38
AVT3YKL146W SSP1P38871 571 aa6.45□□□□□ -1.38
AVT3YKL146W MAM1P40065 302 aa6.45□□□□□ -1.38
AVT3YKL146W ADE16P54113 591 aaKnown RBP6.45□□□□□ -1.38
AVT3YKL146W RIM101P33400 625 aa6.44□□□□□ -1.38
AVT3YKL146W RRT14P40470 206 aa6.44□□□□□ -1.38
AVT3YKL146W GYP7P48365 746 aa6.44□□□□□ -1.38
AVT3YKL146W KCC4P25389 1037 aa6.43□□□□□ -1.38
AVT3YKL146W DOT5P40553 215 aa6.43□□□□□ -1.38
AVT3YKL146W FRK1Q03002 865 aaPredicted RBP6.43□□□□□ -1.38
AVT3YKL146W ATG13Q06628 738 aa6.43□□□□□ -1.38
AVT3YKL146W NUP145P49687 1317 aa6.43□□□□□ -1.38
AVT3YKL146W NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.43□□□□□ -1.38not detected
AVT3YKL146W NSE3Q05541 303 aa6.43□□□□□ -1.38
AVT3YKL146W OSM1P21375 501 aaKnown RBP6.42□□□□□ -1.38
AVT3YKL146W UGA3P26370 528 aa6.42□□□□□ -1.38
AVT3YKL146W YBR287WP38355 427 aa6.42□□□□□ -1.38
AVT3YKL146W RLF2Q12495 606 aa6.42□□□□□ -1.38
AVT3YKL146W COBP00163 385 aa6.41□□□□□ -1.38
AVT3YKL146W FOX2Q02207 900 aaKnown RBP6.41□□□□□ -1.38
AVT3YKL146W AAD16Q02895 342 aa6.41□□□□□ -1.38
AVT3YKL146W BMS1Q08965 1183 aaKnown RBP6.41□□□□□ -1.38
AVT3YKL146W RAD2P07276 1031 aa6.41□□□□□ -1.38
AVT3YKL146W MAK21Q12176 1025 aaKnown RBP6.41□□□□□ -1.38
AVT3YKL146W EDE1P34216 1381 aa6.4□□□□□ -1.39
AVT3YKL146W COQ4O13525 335 aa6.4□□□□□ -1.39
AVT3YKL146W YBP2P53169 641 aa6.4□□□□□ -1.39
AVT3YKL146W SRT1Q03175 343 aa6.4□□□□□ -1.39
AVT3YKL146W LAM6Q08001 693 aa6.4□□□□□ -1.39
AVT3YKL146W RIM15P43565 1770 aa6.39□□□□□ -1.39
AVT3YKL146W DAL5P15365 543 aa6.39□□□□□ -1.39
AVT3YKL146W SPT21P35209 758 aa6.39□□□□□ -1.39
AVT3YKL146W RPN1P38764 993 aaKnown RBP6.39□□□□□ -1.39
AVT3YKL146W ALE1Q08548 619 aa6.39□□□□□ -1.39
AVT3YKL146W FPR3P38911 411 aaKnown RBP6.38□□□□□ -1.39
AVT3YKL146W YIL092WP40497 633 aa6.38□□□□□ -1.39
AVT3YKL146W BUD27P43573 796 aaKnown RBP RIP-Chip data6.38□□□□□ -1.39not detected
AVT3YKL146W YFR016CP43597 1233 aaKnown RBP6.38□□□□□ -1.39
AVT3YKL146W YMR074CQ04773 145 aa6.38□□□□□ -1.39
AVT3YKL146W GLN1P32288 370 aaKnown RBP6.38□□□□□ -1.39
AVT3YKL146W YKR075CP36155 307 aa6.38□□□□□ -1.39
AVT3YKL146W RPN11P43588 306 aaKnown RBP6.38□□□□□ -1.39
AVT3YKL146W YJL181WP46987 611 aa6.38□□□□□ -1.39
AVT3YKL146W PRP40P33203 583 aaKnown RBP6.37□□□□□ -1.39
AVT3YKL146W NOP2P40991 618 aaKnown RBP6.37□□□□□ -1.39
AVT3YKL146W RMT2Q03305 412 aa6.37□□□□□ -1.39
AVT3YKL146W LYS2P07702 1392 aa6.37□□□□□ -1.39
AVT3YKL146W RAD4P14736 754 aa6.37□□□□□ -1.39
AVT3YKL146W GRX1P25373 110 aaKnown RBP6.36□□□□□ -1.39
AVT3YKL146W YOL057WQ08225 711 aa6.36□□□□□ -1.39
AVT3YKL146W AIM44Q99299 758 aa6.36□□□□□ -1.39
AVT3YKL146W UBP1P25037 809 aa6.34□□□□□ -1.39
AVT3YKL146W NOP8Q08287 484 aaPredicted RBP6.34□□□□□ -1.39
AVT3YKL146W TUM1Q08686 304 aaKnown RBP6.34□□□□□ -1.39
AVT3YKL146W NOP53Q12080 455 aaKnown RBP6.34□□□□□ -1.39
AVT3YKL146W YPP1P46951 817 aa6.34□□□□□ -1.4
AVT3YKL146W POL32P47110 350 aa6.33□□□□□ -1.4
AVT3YKL146W ZDS2P54786 942 aa6.33□□□□□ -1.4
AVT3YKL146W SSP2Q08646 371 aa6.33□□□□□ -1.4
AVT3YKL146W MSB4Q12317 492 aa6.33□□□□□ -1.4
AVT3YKL146W TRP5P00931 707 aaKnown RBP6.32□□□□□ -1.4
AVT3YKL146W MRP7P12687 371 aa6.32□□□□□ -1.4
AVT3YKL146W CSI1Q04368 295 aa6.32□□□□□ -1.4
AVT3YKL146W PUF6Q04373 656 aaKnown RBP6.32□□□□□ -1.4
AVT3YKL146W BUD31P25337 157 aaPredicted RBP6.32□□□□□ -1.4
AVT3YKL146W NPR2P39923 615 aa6.32□□□□□ -1.4
AVT3YKL146W MDG1P53885 366 aa6.32□□□□□ -1.4
AVT3YKL146W DNM1P54861 757 aa6.32□□□□□ -1.4
AVT3YKL146W VPS64Q03944 604 aa6.32□□□□□ -1.4
AVT3YKL146W YDR306CQ06640 478 aa6.3□□□□□ -1.4
AVT3YKL146W RPS19AP07280 144 aaKnown RBP6.3□□□□□ -1.4
AVT3YKL146W RPS19BP07281 144 aaPredicted RBP6.3□□□□□ -1.4
AVT3YKL146W RAD24P32641 659 aa6.3□□□□□ -1.4
AVT3YKL146W CST6P40535 587 aa6.3□□□□□ -1.4
AVT3YKL146W YGR122WP53272 402 aa6.3□□□□□ -1.4
AVT3YKL146W GRE2Q12068 342 aaKnown RBP6.3□□□□□ -1.4
AVT3YKL146W PHM7Q12252 991 aa6.3□□□□□ -1.4
AVT3YKL146W APL2P36000 726 aaPredicted RBP6.29□□□□□ -1.4
AVT3YKL146W NUP133P36161 1157 aa6.29□□□□□ -1.4
AVT3YKL146W YNG2P38806 282 aaKnown RBP6.29□□□□□ -1.4
AVT3YKL146W OXP1P28273 1286 aa6.29□□□□□ -1.4
AVT3YKL146W SER1P33330 395 aaKnown RBP6.29□□□□□ -1.4
AVT3YKL146W TEA1P47988 759 aa6.29□□□□□ -1.4
AVT3YKL146W LYS4P49367 693 aaPredicted RBP6.29□□□□□ -1.4
AVT3YKL146W SWC3P31376 625 aa6.28□□□□□ -1.4
AVT3YKL146W SWI1P09547 1314 aa6.28□□□□□ -1.4
AVT3YKL146W YGL082WP53155 381 aa6.27□□□□□ -1.41
AVT3YKL146W SPO1P53541 631 aa6.27□□□□□ -1.41
AVT3YKL146W YPR204WQ08995 1032 aa6.27□□□□□ -1.41
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms