RNA–Protein interactions for RNA: YJR109C

CPA2, Transcript of Large subunit of carbamoyl phosphate synthetase, yeast

Gene CPA2, Length 3,357 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
CPA2	YJR109C	VHR2	P40041	505 aa		4.28	□□□□□ -1.72
CPA2	YJR109C	YOL057W	Q08225	711 aa		4.28	□□□□□ -1.72
CPA2	YJR109C	RPS0A	P32905	252 aa	Known RBP	4.27	□□□□□ -1.73
CPA2	YJR109C	DPS1	P04802	557 aa	Known RBP	4.27	□□□□□ -1.73
CPA2	YJR109C	MRC1	P25588	1096 aa		4.27	□□□□□ -1.73
CPA2	YJR109C	BOL3	P39724	118 aa		4.27	□□□□□ -1.73
CPA2	YJR109C	IES5	P40060	125 aa		4.27	□□□□□ -1.73
CPA2	YJR109C	OYE2	Q03558	400 aa	Known RBP	4.27	□□□□□ -1.73
CPA2	YJR109C	NUT2	Q06213	157 aa		4.27	□□□□□ -1.73
CPA2	YJR109C	TSR4	P25040	408 aa		4.27	□□□□□ -1.73
CPA2	YJR109C	ESF2	P53743	316 aa	Known RBP	4.27	□□□□□ -1.73
CPA2	YJR109C	GUT1	P32190	709 aa		4.26	□□□□□ -1.73
CPA2	YJR109C	MNR2	P35724	969 aa		4.26	□□□□□ -1.73
CPA2	YJR109C	PHO4	P07270	312 aa	Known RBP	4.26	□□□□□ -1.73
CPA2	YJR109C	GAL11	P19659	1081 aa		4.26	□□□□□ -1.73
CPA2	YJR109C	UTP13	Q05946	817 aa	Known RBP	4.26	□□□□□ -1.73
CPA2	YJR109C	GPI13	Q07830	1017 aa		4.26	□□□□□ -1.73
CPA2	YJR109C	LSO1	Q3E827	93 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	PBP2	P38151	413 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CPA2	YJR109C	VPS27	P40343	622 aa	Known RBP	4.25	□□□□□ -1.73
CPA2	YJR109C	FAF1	P40546	346 aa	Predicted RBP	4.25	□□□□□ -1.73
CPA2	YJR109C	UBP3	Q01477	912 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CPA2	YJR109C	MMP1	Q12372	583 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	CDC11	P32458	415 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	MET1	P36150	593 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	MGE1	P38523	228 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	BUB1	P41695	1021 aa	Known RBP RIP-Chip data	4.25	□□□□□ -1.73	not detected
CPA2	YJR109C	YJR142W	P47173	342 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	KIP3	P53086	805 aa	Known RBP	4.25	□□□□□ -1.73
CPA2	YJR109C	ESF1	Q06344	628 aa	Known RBP	4.25	□□□□□ -1.73
CPA2	YJR109C	APC11	Q12157	165 aa		4.25	□□□□□ -1.73
CPA2	YJR109C	HSC82	P15108	705 aa	Known RBP	4.24	□□□□□ -1.73
CPA2	YJR109C	MRPL32	P25348	183 aa		4.24	□□□□□ -1.73
CPA2	YJR109C	YHR020W	P38708	688 aa	Known RBP	4.24	□□□□□ -1.73
CPA2	YJR109C	RTT106	P40161	455 aa		4.24	□□□□□ -1.73
CPA2	YJR109C	GDE1	Q02979	1223 aa		4.24	□□□□□ -1.73
CPA2	YJR109C	SRS2	P12954	1174 aa		4.24	□□□□□ -1.73
CPA2	YJR109C	DBP1	P24784	617 aa	Known RBP	4.24	□□□□□ -1.73
CPA2	YJR109C	GLO3	P38682	493 aa	Known RBP	4.24	□□□□□ -1.73
CPA2	YJR109C	KAR5	Q04746	504 aa		4.24	□□□□□ -1.73
CPA2	YJR109C	PHO87	P25360	923 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	YGR053C	P53234	283 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	DNM1	P54861	757 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	SAM3	Q08986	587 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	ATP4	P05626	244 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	BOI1	P38041	980 aa	Known RBP	4.23	□□□□□ -1.73
CPA2	YJR109C	VAC8	P39968	578 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	FYV10	P40492	516 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	ROM1	P53046	1155 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	ECM23	Q02710	187 aa		4.23	□□□□□ -1.73
CPA2	YJR109C	YJU3	P28321	313 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	SRP40	P32583	406 aa	Predicted RBP	4.22	□□□□□ -1.73
CPA2	YJR109C	PEX8	P53248	589 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	PPG1	P32838	368 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	RAD54	P32863	898 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	RPT2	P40327	437 aa	Known RBP	4.22	□□□□□ -1.73
CPA2	YJR109C	HOS4	P40480	1083 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	RRI2	Q12348	645 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	HIF1	Q12373	385 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	UBP1	P25037	809 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	DPB3	P27344	201 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	CHZ1	P40019	153 aa	Predicted RBP	4.22	□□□□□ -1.73
CPA2	YJR109C	PKH3	Q03306	898 aa	Predicted RBP	4.22	□□□□□ -1.73
CPA2	YJR109C	PNP1	Q05788	311 aa		4.22	□□□□□ -1.73
CPA2	YJR109C	FUI1	P38196	639 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	YGR021W	P53212	290 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	YOR378W	Q08902	515 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	MCM16	Q12262	181 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	RTP1	Q12751	981 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	ESS1	P22696	170 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	SEC6	P32844	805 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	RKM3	P38222	552 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	QDR1	P40475	563 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	COG4	Q06096	861 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	YPR084W	Q06821	456 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	PSH1	Q12161	406 aa		4.21	□□□□□ -1.74
CPA2	YJR109C	MIP1	P15801	1254 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	CLN2	P20438	545 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	MCM2	P29469	868 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	KTR2	P33550	425 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	KIC1	P38692	1080 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	SNF7	P39929	240 aa	Known RBP	4.2	□□□□□ -1.74
CPA2	YJR109C	YGR122W	P53272	402 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	ALD6	P54115	500 aa	Known RBP	4.2	□□□□□ -1.74
CPA2	YJR109C	CSC1	Q06538	782 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	AI4	P03878	556 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	THS1	P04801	734 aa	Known RBP	4.2	□□□□□ -1.74
CPA2	YJR109C	HAP4	P14064	554 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	MNN1	P39106	762 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	TRS120	Q04183	1289 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	YKL091C	P33324	310 aa	Known RBP	4.2	□□□□□ -1.74
CPA2	YJR109C	NOC2	P39744	710 aa	Known RBP	4.2	□□□□□ -1.74
CPA2	YJR109C	DAK2	P43550	591 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	TGL2	P54857	326 aa		4.2	□□□□□ -1.74
CPA2	YJR109C	KAR1	P11927	433 aa		4.19	□□□□□ -1.74
CPA2	YJR109C	SCJ1	P25303	377 aa		4.19	□□□□□ -1.74
CPA2	YJR109C	SUV3	P32580	737 aa		4.19	□□□□□ -1.74
CPA2	YJR109C	YNR029C	P53729	429 aa	Known RBP	4.19	□□□□□ -1.74
CPA2	YJR109C	FRA1	Q07825	749 aa		4.19	□□□□□ -1.74
CPA2	YJR109C	HAA1	Q12753	694 aa	Known RBP	4.19	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 16.1 ms