RNA–Protein interactions for RNA: YJL134W

LCB3, Transcript of Long-chain base-1-phosphate phosphatase, yeastyeast

Gene LCB3, Length 1,230 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LCB3YJL134W EDE1P34216 1381 aa7.93□□□□□ -1.14
LCB3YJL134W DPS1P04802 557 aaKnown RBP7.92□□□□□ -1.14
LCB3YJL134W SUI2P20459 304 aaKnown RBP7.92□□□□□ -1.14
LCB3YJL134W FUN12P39730 1002 aaKnown RBP7.92□□□□□ -1.14
LCB3YJL134W YRB30P53107 440 aaPredicted RBP7.92□□□□□ -1.14
LCB3YJL134W GAS4Q08271 471 aa7.92□□□□□ -1.14
LCB3YJL134W RPO41P13433 1351 aaKnown RBP7.92□□□□□ -1.14
LCB3YJL134W MAK11P20484 414 aaKnown RBP7.91□□□□□ -1.14
LCB3YJL134W YRF1-2P40105 1681 aa7.9□□□□□ -1.14
LCB3YJL134W RCR1P38212 213 aa7.9□□□□□ -1.14
LCB3YJL134W RLF2Q12495 606 aa7.9□□□□□ -1.14
LCB3YJL134W PRD1P25375 712 aa7.89□□□□□ -1.15
LCB3YJL134W DSF2P38213 736 aa7.89□□□□□ -1.15
LCB3YJL134W BUD31P25337 157 aaPredicted RBP7.88□□□□□ -1.15
LCB3YJL134W SAP155P43612 1002 aa7.88□□□□□ -1.15
LCB3YJL134W UBP1P25037 809 aa7.87□□□□□ -1.15
LCB3YJL134W TPD3P31383 635 aa7.87□□□□□ -1.15
LCB3YJL134W BDF1P35817 686 aa7.87□□□□□ -1.15
LCB3YJL134W GTT3P39996 337 aa7.87□□□□□ -1.15
LCB3YJL134W THI22Q06490 572 aa7.87□□□□□ -1.15
LCB3YJL134W APC1P53886 1748 aa7.86□□□□□ -1.15
LCB3YJL134W RRP5Q05022 1729 aaKnown RBP7.86□□□□□ -1.15
LCB3YJL134W PBS2P08018 668 aa7.86□□□□□ -1.15
LCB3YJL134W FPR3P38911 411 aaKnown RBP7.86□□□□□ -1.15
LCB3YJL134W YIL177CP40434 1758 aa7.86□□□□□ -1.15
LCB3YJL134W YJL225CP40889 1758 aa7.86□□□□□ -1.15
LCB3YJL134W FKS3Q04952 1785 aa7.85□□□□□ -1.15
LCB3YJL134W BUB1P41695 1021 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
LCB3YJL134W NAB6Q03735 1134 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
LCB3YJL134W SIR4P11978 1358 aa7.84□□□□□ -1.15
LCB3YJL134W PRP45P28004 379 aaPredicted RBP7.84□□□□□ -1.15
LCB3YJL134W AKL1P38080 1108 aaKnown RBP7.84□□□□□ -1.15
LCB3YJL134W YNR021WP53723 404 aaKnown RBP7.84□□□□□ -1.15
LCB3YJL134W HEF3P53978 1044 aaKnown RBP7.83□□□□□ -1.16
LCB3YJL134W RTT109Q07794 436 aa7.83□□□□□ -1.16
LCB3YJL134W YRF1-4O13559 1382 aa7.83□□□□□ -1.16
LCB3YJL134W URB1P34241 1764 aaKnown RBP7.82□□□□□ -1.16
LCB3YJL134W RAD2P07276 1031 aa7.82□□□□□ -1.16
LCB3YJL134W PRP5P21372 849 aaPredicted RBP7.82□□□□□ -1.16
LCB3YJL134W BUD27P43573 796 aaKnown RBP RIP-Chip data7.81□□□□□ -1.16not detected
LCB3YJL134W NOP53Q12080 455 aaKnown RBP7.81□□□□□ -1.16
LCB3YJL134W DAL5P15365 543 aa7.8□□□□□ -1.16
LCB3YJL134W HGH1P48362 394 aaKnown RBP7.8□□□□□ -1.16
LCB3YJL134W DSD1P53095 428 aa7.8□□□□□ -1.16
LCB3YJL134W MAK21Q12176 1025 aaKnown RBP7.8□□□□□ -1.16
LCB3YJL134W KIN1P13185 1064 aa7.79□□□□□ -1.16
LCB3YJL134W COQ8P27697 501 aa7.79□□□□□ -1.16
LCB3YJL134W MSB3P48566 633 aaPredicted RBP7.79□□□□□ -1.16
LCB3YJL134W SLM3Q12093 417 aa7.79□□□□□ -1.16
LCB3YJL134W UGA2P38067 497 aa7.78□□□□□ -1.16
LCB3YJL134W YIL092WP40497 633 aa7.78□□□□□ -1.16
LCB3YJL134W YNL050CP53952 270 aa7.78□□□□□ -1.16
LCB3YJL134W ROM2P51862 1356 aaKnown RBP7.78□□□□□ -1.16
LCB3YJL134W HSP104P31539 908 aaKnown RBP7.77□□□□□ -1.17
LCB3YJL134W NTH2P35172 780 aa7.77□□□□□ -1.17
LCB3YJL134W SCY1P53009 804 aa7.77□□□□□ -1.17
LCB3YJL134W TCB1Q12466 1186 aa7.77□□□□□ -1.17
LCB3YJL134W GYP7P48365 746 aa7.76□□□□□ -1.17
LCB3YJL134W AOS1Q06624 347 aa7.76□□□□□ -1.17
LCB3YJL134W AIM7Q12156 149 aa7.76□□□□□ -1.17
LCB3YJL134W MAM3Q12296 706 aa7.76□□□□□ -1.17
LCB3YJL134W RSF2P46974 1380 aa7.75□□□□□ -1.17
LCB3YJL134W VPS29P38759 282 aa7.75□□□□□ -1.17
LCB3YJL134W MAM1P40065 302 aa7.75□□□□□ -1.17
LCB3YJL134W RRT14P40470 206 aa7.75□□□□□ -1.17
LCB3YJL134W XKS1P42826 600 aa7.75□□□□□ -1.17
LCB3YJL134W ZDS1P50111 915 aaKnown RBP7.75□□□□□ -1.17
LCB3YJL134W RPC31P17890 251 aa7.74□□□□□ -1.17
LCB3YJL134W YBL086CP38177 466 aa7.74□□□□□ -1.17
LCB3YJL134W REF2P42073 533 aaPredicted RBP7.74□□□□□ -1.17
LCB3YJL134W ALD2P47771 506 aa7.74□□□□□ -1.17
LCB3YJL134W CTF4Q01454 927 aa7.74□□□□□ -1.17
LCB3YJL134W SSA1P10591 642 aaKnown RBP7.73□□□□□ -1.17
LCB3YJL134W IES2P40154 320 aa7.73□□□□□ -1.17
LCB3YJL134W YBR287WP38355 427 aa7.72□□□□□ -1.17
LCB3YJL134W DOT5P40553 215 aa7.72□□□□□ -1.17
LCB3YJL134W RPN11P43588 306 aaKnown RBP7.72□□□□□ -1.17
LCB3YJL134W POL32P47110 350 aa7.72□□□□□ -1.17
LCB3YJL134W KCC4P25389 1037 aa7.71□□□□□ -1.18
LCB3YJL134W UGA3P26370 528 aa7.71□□□□□ -1.18
LCB3YJL134W GLC3P32775 704 aa7.71□□□□□ -1.18
LCB3YJL134W YFR016CP43597 1233 aaKnown RBP7.71□□□□□ -1.18
LCB3YJL134W YJL181WP46987 611 aa7.71□□□□□ -1.18
LCB3YJL134W UBP10P53874 792 aaPredicted RBP7.71□□□□□ -1.18
LCB3YJL134W SRT1Q03175 343 aa7.7□□□□□ -1.18
LCB3YJL134W NSE3Q05541 303 aa7.7□□□□□ -1.18
LCB3YJL134W BMS1Q08965 1183 aaKnown RBP7.7□□□□□ -1.18
LCB3YJL134W LYS2P07702 1392 aa7.7□□□□□ -1.18
LCB3YJL134W TRP5P00931 707 aaKnown RBP7.69□□□□□ -1.18
LCB3YJL134W PRP40P33203 583 aaKnown RBP7.69□□□□□ -1.18
LCB3YJL134W YMR1P47147 688 aaKnown RBP RIP-Chip data7.69□□□□□ -1.18not detected
LCB3YJL134W PUF6Q04373 656 aaKnown RBP7.69□□□□□ -1.18
LCB3YJL134W LAM6Q08001 693 aa7.69□□□□□ -1.18
LCB3YJL134W NUP145P49687 1317 aa7.69□□□□□ -1.18
LCB3YJL134W COQ4O13525 335 aa7.68□□□□□ -1.18
LCB3YJL134W MEC3Q02574 474 aa7.68□□□□□ -1.18
LCB3YJL134W INP54Q08227 384 aaKnown RBP7.68□□□□□ -1.18
LCB3YJL134W SSA2P10592 639 aaKnown RBP7.67□□□□□ -1.18
LCB3YJL134W YPP1P46951 817 aa7.67□□□□□ -1.18
LCB3YJL134W FOX2Q02207 900 aaKnown RBP7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 23.8 ms