RNA–Protein interactions for RNA: YIL071C

PCI8, Transcript of Possible shared subunit of Cop9 signalosome (CSN) and eIF3, yeastyeast

Gene PCI8, Length 1,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCI8YIL071C GLN1P32288 370 aaKnown RBP8.16□□□□□ -1.1
PCI8YIL071C UBP2Q01476 1272 aa8.16□□□□□ -1.1
PCI8YIL071C HPF1Q05164 967 aa8.16□□□□□ -1.1
PCI8YIL071C VAC17P25591 423 aa8.13□□□□□ -1.11
PCI8YIL071C AAD14P42884 376 aa8.13□□□□□ -1.11
PCI8YIL071C ATF2P53296 535 aa8.13□□□□□ -1.11
PCI8YIL071C DMA1P38823 416 aa8.12□□□□□ -1.11
PCI8YIL071C ESS1P22696 170 aa8.1□□□□□ -1.11
PCI8YIL071C YBL086CP38177 466 aa8.1□□□□□ -1.11
PCI8YIL071C YPR204WQ08995 1032 aa8.09□□□□□ -1.11
PCI8YIL071C YJR098CP47139 656 aa8.07□□□□□ -1.12
PCI8YIL071C DLD1P32891 587 aa8.06□□□□□ -1.12
PCI8YIL071C APP1P53933 587 aa8.05□□□□□ -1.12
PCI8YIL071C YJU3P28321 313 aa8.04□□□□□ -1.12
PCI8YIL071C TCB1Q12466 1186 aa8.04□□□□□ -1.12
PCI8YIL071C EMW1P42842 904 aaKnown RBP8.02□□□□□ -1.13
PCI8YIL071C ROG3P43602 733 aa8.02□□□□□ -1.13
PCI8YIL071C DPH6Q12429 685 aa8.02□□□□□ -1.13
PCI8YIL071C OSH7P38755 437 aa8.01□□□□□ -1.13
PCI8YIL071C ICP55P40051 511 aa8□□□□□ -1.13
PCI8YIL071C TY1A-MR1Q04215 440 aa8□□□□□ -1.13
PCI8YIL071C PUS1Q12211 544 aaKnown RBP8□□□□□ -1.13
PCI8YIL071C RSC30P38781 883 aa7.99□□□□□ -1.13
PCI8YIL071C ITT1Q04638 464 aa7.99□□□□□ -1.13
PCI8YIL071C PKH3Q03306 898 aaPredicted RBP7.98□□□□□ -1.13
PCI8YIL071C YNR021WP53723 404 aaKnown RBP7.97□□□□□ -1.13
PCI8YIL071C ARG8P18544 423 aa7.96□□□□□ -1.14
PCI8YIL071C GLC3P32775 704 aa7.96□□□□□ -1.14
PCI8YIL071C MKS1P34072 584 aa7.96□□□□□ -1.14
PCI8YIL071C LYS5P50113 272 aa7.95□□□□□ -1.14
PCI8YIL071C DFG5Q05031 458 aa7.93□□□□□ -1.14
PCI8YIL071C BDS1Q08347 646 aa7.92□□□□□ -1.14
PCI8YIL071C PHM7Q12252 991 aa7.92□□□□□ -1.14
PCI8YIL071C CCP1P00431 361 aa7.91□□□□□ -1.14
PCI8YIL071C FIG4P42837 879 aa7.91□□□□□ -1.14
PCI8YIL071C LSB3P43603 459 aaKnown RBP7.89□□□□□ -1.15
PCI8YIL071C KTR1P27810 393 aaKnown RBP7.88□□□□□ -1.15
PCI8YIL071C JJJ3P47138 172 aa7.88□□□□□ -1.15
PCI8YIL071C TEC1P18412 486 aa7.86□□□□□ -1.15
PCI8YIL071C FBP26P32604 452 aa7.86□□□□□ -1.15
PCI8YIL071C CSN12P47130 423 aa7.85□□□□□ -1.15
PCI8YIL071C AIM7Q12156 149 aa7.85□□□□□ -1.15
PCI8YIL071C CDC19P00549 500 aaKnown RBP7.82□□□□□ -1.16
PCI8YIL071C MDJ1P35191 511 aa7.82□□□□□ -1.16
PCI8YIL071C NSG2P53898 299 aa7.82□□□□□ -1.16
PCI8YIL071C STE6P12866 1290 aa7.81□□□□□ -1.16
PCI8YIL071C VTC4P47075 721 aa7.81□□□□□ -1.16
PCI8YIL071C NAM8Q00539 523 aaKnown RBP7.81□□□□□ -1.16
PCI8YIL071C RAD59Q12223 238 aa7.81□□□□□ -1.16
PCI8YIL071C RPP2BP02400 110 aaKnown RBP7.78□□□□□ -1.16
PCI8YIL071C AI1P03875 834 aa7.78□□□□□ -1.16
PCI8YIL071C THI72Q08579 599 aa7.78□□□□□ -1.16
PCI8YIL071C DLD3P39976 496 aaKnown RBP7.77□□□□□ -1.17
PCI8YIL071C CUZ1P53899 274 aa7.77□□□□□ -1.17
PCI8YIL071C YPR084WQ06821 456 aa7.77□□□□□ -1.17
PCI8YIL071C CEM1P39525 442 aa7.76□□□□□ -1.17
PCI8YIL071C GUT2P32191 649 aa7.75□□□□□ -1.17
PCI8YIL071C DAL1P32375 460 aa7.75□□□□□ -1.17
PCI8YIL071C ISU1Q03020 165 aa7.75□□□□□ -1.17
PCI8YIL071C ATG20Q07528 640 aa7.75□□□□□ -1.17
PCI8YIL071C MAK16P10962 306 aaPredicted RBP7.71□□□□□ -1.18
PCI8YIL071C SSA2P10592 639 aaKnown RBP7.7□□□□□ -1.18
PCI8YIL071C STE20Q03497 939 aaKnown RBP7.69□□□□□ -1.18
PCI8YIL071C YFL066CP43538 392 aa7.68□□□□□ -1.18
PCI8YIL071C UBP15P50101 1230 aa7.68□□□□□ -1.18
PCI8YIL071C NAF1P53919 492 aaKnown RBP7.67□□□□□ -1.18
PCI8YIL071C ADE12P80210 433 aaKnown RBP7.67□□□□□ -1.18
PCI8YIL071C YMR265CQ03508 461 aaKnown RBP7.67□□□□□ -1.18
PCI8YIL071C YPR053CQ6Q5F3 151 aa7.67□□□□□ -1.18
PCI8YIL071C CCT8P47079 568 aaKnown RBP7.66□□□□□ -1.18
PCI8YIL071C NRD1P53617 575 aaKnown RBP RIP-Chip data7.66□□□□□ -1.18not detected
PCI8YIL071C DIT1P21623 536 aa7.65□□□□□ -1.18
PCI8YIL071C FRA1Q07825 749 aa7.65□□□□□ -1.18
PCI8YIL071C MSN5P52918 1224 aa7.63□□□□□ -1.19
PCI8YIL071C SYT1Q06836 1226 aa7.63□□□□□ -1.19
PCI8YIL071C SBP1P10080 294 aaKnown RBP7.61□□□□□ -1.19
PCI8YIL071C KRE33P53914 1056 aaKnown RBP7.61□□□□□ -1.19
PCI8YIL071C AHP1P38013 176 aaKnown RBP7.6□□□□□ -1.19
PCI8YIL071C YDR461C-AQ2V2P7 80 aa7.6□□□□□ -1.19
PCI8YIL071C WTM2Q12206 467 aa7.59□□□□□ -1.19
PCI8YIL071C DAT1P13483 248 aaKnown RBP7.58□□□□□ -1.2
PCI8YIL071C SSN3P39073 555 aa7.58□□□□□ -1.2
PCI8YIL071C MRX12P47084 519 aa7.57□□□□□ -1.2
PCI8YIL071C ISR1Q06098 443 aaKnown RBP7.57□□□□□ -1.2
PCI8YIL071C TDA6Q06466 467 aa7.57□□□□□ -1.2
PCI8YIL071C UTR2P32623 467 aa7.56□□□□□ -1.2
PCI8YIL071C SLA1P32790 1244 aa7.56□□□□□ -1.2
PCI8YIL071C SBE2P42223 864 aaKnown RBP7.56□□□□□ -1.2
PCI8YIL071C YMR187CQ03236 431 aa7.56□□□□□ -1.2
PCI8YIL071C TBS1P38114 1094 aa7.55□□□□□ -1.2
PCI8YIL071C SKN7P38889 622 aa7.55□□□□□ -1.2
PCI8YIL071C SPT2P06843 333 aaPredicted RBP7.54□□□□□ -1.2
PCI8YIL071C YNR014WP53719 212 aa7.54□□□□□ -1.2
PCI8YIL071C EMP47P43555 445 aa7.53□□□□□ -1.2
PCI8YIL071C TY1A-DR3Q12441 440 aa7.53□□□□□ -1.2
PCI8YIL071C CSE4P36012 229 aa7.52□□□□□ -1.2
PCI8YIL071C KIN1P13185 1064 aa7.52□□□□□ -1.21
PCI8YIL071C ALA1P40825 983 aaKnown RBP7.52□□□□□ -1.21
PCI8YIL071C SPT5P27692 1063 aaKnown RBP7.5□□□□□ -1.21
PCI8YIL071C ISF1P32488 338 aa7.5□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 102.6 ms