RNA–Protein interactions for RNA: YHR108W

GGA2, Transcript of Protein that regulates Arf1p, Arf2p to facilitate Golgi trafficking, yeastyeast

Gene GGA2, Length 1,758 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GGA2YHR108W XKS1P42826 600 aa10.11□□□□□ -0.79
GGA2YHR108W NSE3Q05541 303 aa10.11□□□□□ -0.79
GGA2YHR108W BMS1Q08965 1183 aaKnown RBP10.11□□□□□ -0.79
GGA2YHR108W TRP5P00931 707 aaKnown RBP10.11□□□□□ -0.79
GGA2YHR108W UGA3P26370 528 aa10.11□□□□□ -0.79
GGA2YHR108W RCR1P38212 213 aa10.1□□□□□ -0.79
GGA2YHR108W YPP1P46951 817 aa10.09□□□□□ -0.79
GGA2YHR108W KCC4P25389 1037 aa10.09□□□□□ -0.79
GGA2YHR108W COQ4O13525 335 aa10.08□□□□□ -0.8
GGA2YHR108W RSF2P46974 1380 aa10.07□□□□□ -0.8
GGA2YHR108W LYS2P07702 1392 aa10.06□□□□□ -0.8
GGA2YHR108W YIR014WP40570 242 aa10.06□□□□□ -0.8
GGA2YHR108W ECM16Q04217 1267 aaKnown RBP10.06□□□□□ -0.8
GGA2YHR108W CSI1Q04368 295 aa10.06□□□□□ -0.8
GGA2YHR108W NUP145P49687 1317 aa10.05□□□□□ -0.8
GGA2YHR108W YNG2P38806 282 aaKnown RBP10.05□□□□□ -0.8
GGA2YHR108W NOP8Q08287 484 aaPredicted RBP10.04□□□□□ -0.8
GGA2YHR108W OPY1P38271 328 aa10.03□□□□□ -0.8
GGA2YHR108W MEC3Q02574 474 aa10.03□□□□□ -0.8
GGA2YHR108W YOL057WQ08225 711 aa10.03□□□□□ -0.8
GGA2YHR108W INP54Q08227 384 aaKnown RBP10.03□□□□□ -0.8
GGA2YHR108W RPS19AP07280 144 aaKnown RBP10.02□□□□□ -0.81
GGA2YHR108W RPS19BP07281 144 aaPredicted RBP10.02□□□□□ -0.81
GGA2YHR108W REB1P21538 810 aa10.01□□□□□ -0.81
GGA2YHR108W IME2P32581 645 aa10.01□□□□□ -0.81
GGA2YHR108W SPO1P53541 631 aa10.01□□□□□ -0.81
GGA2YHR108W ENT1Q12518 454 aa10.01□□□□□ -0.81
GGA2YHR108W RAD4P14736 754 aa10.01□□□□□ -0.81
GGA2YHR108W MRP7P12687 371 aa10□□□□□ -0.81
GGA2YHR108W ILV3P39522 585 aaKnown RBP9.99□□□□□ -0.81
GGA2YHR108W EAF7P53911 425 aaKnown RBP9.99□□□□□ -0.81
GGA2YHR108W NMD2P38798 1089 aaKnown RBP9.98□□□□□ -0.81
GGA2YHR108W IES2P40154 320 aa9.98□□□□□ -0.81
GGA2YHR108W RAD24P32641 659 aa9.98□□□□□ -0.81
GGA2YHR108W ALE1Q08548 619 aa9.98□□□□□ -0.81
GGA2YHR108W ADE16P54113 591 aaKnown RBP9.97□□□□□ -0.81
GGA2YHR108W OSM1P21375 501 aaKnown RBP9.96□□□□□ -0.81
GGA2YHR108W RFC1P38630 861 aaKnown RBP9.96□□□□□ -0.82
GGA2YHR108W YGR122WP53272 402 aa9.96□□□□□ -0.82
GGA2YHR108W NKP2Q06162 153 aa9.96□□□□□ -0.82
GGA2YHR108W ATG13Q06628 738 aa9.96□□□□□ -0.82
GGA2YHR108W YDR306CQ06640 478 aa9.96□□□□□ -0.82
GGA2YHR108W ENV9Q08651 330 aa9.96□□□□□ -0.82
GGA2YHR108W RAD50P12753 1312 aa9.95□□□□□ -0.82
GGA2YHR108W YKL133CP36066 463 aa9.95□□□□□ -0.82
GGA2YHR108W HGH1P48362 394 aaKnown RBP9.95□□□□□ -0.82
GGA2YHR108W DNM1P54861 757 aa9.95□□□□□ -0.82
GGA2YHR108W YRF1-3P0CX14 1859 aa9.94□□□□□ -0.82
GGA2YHR108W YRF1-7P0CX15 1859 aa9.94□□□□□ -0.82
GGA2YHR108W YRF1-6P53819 1859 aa9.94□□□□□ -0.82
GGA2YHR108W BOI2P39969 1040 aa9.93□□□□□ -0.82
GGA2YHR108W PCT1P13259 424 aa9.93□□□□□ -0.82
GGA2YHR108W GCD7P32502 381 aaPredicted RBP9.93□□□□□ -0.82
GGA2YHR108W CST6P40535 587 aa9.93□□□□□ -0.82
GGA2YHR108W YBP2P53169 641 aa9.93□□□□□ -0.82
GGA2YHR108W ZDS2P54786 942 aa9.93□□□□□ -0.82
GGA2YHR108W FRK1Q03002 865 aaPredicted RBP9.93□□□□□ -0.82
GGA2YHR108W RMT2Q03305 412 aa9.93□□□□□ -0.82
GGA2YHR108W SWC3P31376 625 aa9.91□□□□□ -0.82
GGA2YHR108W NUP133P36161 1157 aa9.91□□□□□ -0.82
GGA2YHR108W YAH1Q12184 172 aaKnown RBP9.91□□□□□ -0.82
GGA2YHR108W APP1P53933 587 aa9.91□□□□□ -0.82
GGA2YHR108W IMH1Q06704 911 aaKnown RBP9.91□□□□□ -0.82
GGA2YHR108W ROM2P51862 1356 aaKnown RBP9.9□□□□□ -0.82
GGA2YHR108W SWI1P09547 1314 aa9.88□□□□□ -0.83
GGA2YHR108W CDC16P09798 840 aa9.88□□□□□ -0.83
GGA2YHR108W YFR006WP43590 535 aa9.88□□□□□ -0.83
GGA2YHR108W BDP1P46678 594 aa9.88□□□□□ -0.83
GGA2YHR108W YJR008WP47085 338 aa9.88□□□□□ -0.83
GGA2YHR108W GCR2Q01722 534 aa9.88□□□□□ -0.83
GGA2YHR108W VPS64Q03944 604 aa9.88□□□□□ -0.83
GGA2YHR108W SSP2Q08646 371 aa9.88□□□□□ -0.83
GGA2YHR108W NOP53Q12080 455 aaKnown RBP9.88□□□□□ -0.83
GGA2YHR108W CLC1P17891 233 aa9.87□□□□□ -0.83
GGA2YHR108W DLD1P32891 587 aa9.87□□□□□ -0.83
GGA2YHR108W RLF2Q12495 606 aa9.87□□□□□ -0.83
GGA2YHR108W VPS24P36095 224 aaKnown RBP9.86□□□□□ -0.83
GGA2YHR108W NCB2Q92317 146 aa9.86□□□□□ -0.83
GGA2YHR108W BRN1P38170 754 aa9.85□□□□□ -0.83
GGA2YHR108W SNF7P39929 240 aaKnown RBP9.85□□□□□ -0.83
GGA2YHR108W VAS1P07806 1104 aaKnown RBP9.84□□□□□ -0.83
GGA2YHR108W SSF1P38789 453 aaPredicted RBP9.84□□□□□ -0.83
GGA2YHR108W UBP12P39538 1254 aa9.84□□□□□ -0.83
GGA2YHR108W MDG1P53885 366 aa9.84□□□□□ -0.83
GGA2YHR108W LPD1P09624 499 aaKnown RBP9.83□□□□□ -0.84
GGA2YHR108W LSP1Q12230 341 aaKnown RBP9.83□□□□□ -0.84
GGA2YHR108W GRX1P25373 110 aaKnown RBP9.83□□□□□ -0.84
GGA2YHR108W COBP00163 385 aa9.82□□□□□ -0.84
GGA2YHR108W APL2P36000 726 aaPredicted RBP9.82□□□□□ -0.84
GGA2YHR108W ITC1P53125 1264 aa9.82□□□□□ -0.84
GGA2YHR108W SRS2P12954 1174 aa9.81□□□□□ -0.84
GGA2YHR108W ROX1P25042 368 aa9.8□□□□□ -0.84
GGA2YHR108W SET1P38827 1080 aaKnown RBP9.8□□□□□ -0.84
GGA2YHR108W DOT5P40553 215 aa9.8□□□□□ -0.84
GGA2YHR108W DJP1P40564 432 aa9.8□□□□□ -0.84
GGA2YHR108W FOX2Q02207 900 aaKnown RBP9.8□□□□□ -0.84
GGA2YHR108W PKH1Q03407 766 aa9.8□□□□□ -0.84
GGA2YHR108W YLR271WQ06152 274 aa9.8□□□□□ -0.84
GGA2YHR108W TUM1Q08686 304 aaKnown RBP9.8□□□□□ -0.84
GGA2YHR108W PHM7Q12252 991 aa9.8□□□□□ -0.84
Retrieved 100 of 5,963 RNA–protein pairs in 35.6 ms