RNA–Protein interactions for RNA: YGR279C

SCW4, Transcript of Cell wall protein with similarity to glucanases, yeastyeast

Gene SCW4, Length 1,161 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCW4YGR279C CDC45Q08032 650 aa6.78□□□□□ -1.32
SCW4YGR279C YRF1-4O13559 1382 aa6.78□□□□□ -1.32
SCW4YGR279C HOP09932 586 aa6.77□□□□□ -1.33
SCW4YGR279C PRP40P33203 583 aaKnown RBP6.77□□□□□ -1.33
SCW4YGR279C NTH2P35172 780 aa6.77□□□□□ -1.33
SCW4YGR279C DOT5P40553 215 aa6.77□□□□□ -1.33
SCW4YGR279C RRP46P53256 223 aaPredicted RBP6.77□□□□□ -1.33
SCW4YGR279C NST1P53935 1240 aa6.77□□□□□ -1.33
SCW4YGR279C TFC8Q12308 588 aa6.77□□□□□ -1.33
SCW4YGR279C YRF1-3P0CX14 1859 aa6.77□□□□□ -1.33
SCW4YGR279C YRF1-7P0CX15 1859 aa6.77□□□□□ -1.33
SCW4YGR279C YRF1-6P53819 1859 aa6.77□□□□□ -1.33
SCW4YGR279C HSP104P31539 908 aaKnown RBP6.76□□□□□ -1.33
SCW4YGR279C YJL181WP46987 611 aa6.76□□□□□ -1.33
SCW4YGR279C MDG1P53885 366 aa6.76□□□□□ -1.33
SCW4YGR279C LYS2P07702 1392 aa6.76□□□□□ -1.33
SCW4YGR279C URB1P34241 1764 aaKnown RBP6.76□□□□□ -1.33
SCW4YGR279C SNF2P22082 1703 aa6.76□□□□□ -1.33
SCW4YGR279C GRX1P25373 110 aaKnown RBP6.75□□□□□ -1.33
SCW4YGR279C KCC4P25389 1037 aa6.75□□□□□ -1.33
SCW4YGR279C NSE3Q05541 303 aa6.75□□□□□ -1.33
SCW4YGR279C ATG13Q06628 738 aa6.75□□□□□ -1.33
SCW4YGR279C INP54Q08227 384 aaKnown RBP6.75□□□□□ -1.33
SCW4YGR279C DCD1P06773 312 aa6.74□□□□□ -1.33
SCW4YGR279C OSM1P21375 501 aaKnown RBP6.74□□□□□ -1.33
SCW4YGR279C BUB1P41695 1021 aaKnown RBP RIP-Chip data6.74□□□□□ -1.33not detected
SCW4YGR279C ZDS1P50111 915 aaKnown RBP6.74□□□□□ -1.33
SCW4YGR279C FOX2Q02207 900 aaKnown RBP6.74□□□□□ -1.33
SCW4YGR279C YDL144CQ07589 356 aa6.74□□□□□ -1.33
SCW4YGR279C YIL177CP40434 1758 aa6.74□□□□□ -1.33
SCW4YGR279C YJL225CP40889 1758 aa6.74□□□□□ -1.33
SCW4YGR279C NUP145P49687 1317 aa6.73□□□□□ -1.33
SCW4YGR279C GYP7P48365 746 aa6.72□□□□□ -1.33
SCW4YGR279C ADE16P54113 591 aaKnown RBP6.72□□□□□ -1.33
SCW4YGR279C COBP00163 385 aa6.71□□□□□ -1.34
SCW4YGR279C RAD4P14736 754 aa6.71□□□□□ -1.34
SCW4YGR279C YKR075CP36155 307 aa6.71□□□□□ -1.34
SCW4YGR279C MAK21Q12176 1025 aaKnown RBP6.71□□□□□ -1.34
SCW4YGR279C MSB4Q12317 492 aa6.71□□□□□ -1.34
SCW4YGR279C OXP1P28273 1286 aa6.7□□□□□ -1.34
SCW4YGR279C PRS1P32895 427 aaKnown RBP6.7□□□□□ -1.34
SCW4YGR279C RPN11P43588 306 aaKnown RBP6.7□□□□□ -1.34
SCW4YGR279C YBP2P53169 641 aa6.7□□□□□ -1.34
SCW4YGR279C THI22Q06490 572 aa6.7□□□□□ -1.34
SCW4YGR279C BUD31P25337 157 aaPredicted RBP6.69□□□□□ -1.34
SCW4YGR279C MPP10P47083 593 aaKnown RBP6.69□□□□□ -1.34
SCW4YGR279C ALD2P47771 506 aa6.69□□□□□ -1.34
SCW4YGR279C FRK1Q03002 865 aaPredicted RBP6.69□□□□□ -1.34
SCW4YGR279C BDF1P35817 686 aa6.68□□□□□ -1.34
SCW4YGR279C UGA2P38067 497 aa6.68□□□□□ -1.34
SCW4YGR279C BUD27P43573 796 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34not detected
SCW4YGR279C UTP22P53254 1237 aaPredicted RBP6.68□□□□□ -1.34
SCW4YGR279C HEF3P53978 1044 aaKnown RBP6.68□□□□□ -1.34
SCW4YGR279C RMT2Q03305 412 aa6.68□□□□□ -1.34
SCW4YGR279C NAB6Q03735 1134 aaKnown RBP RIP-Chip data6.68□□□□□ -1.34 RIP-Chip
SCW4YGR279C SSP2Q08646 371 aa6.68□□□□□ -1.34
SCW4YGR279C PHM7Q12252 991 aa6.68□□□□□ -1.34
SCW4YGR279C YGL015CP33199 130 aa6.67□□□□□ -1.34
SCW4YGR279C NPR2P39923 615 aa6.67□□□□□ -1.34
SCW4YGR279C SAP155P43612 1002 aa6.67□□□□□ -1.34
SCW4YGR279C NSR1P27476 414 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SCW4YGR279C BMS1Q08965 1183 aaKnown RBP6.66□□□□□ -1.34
SCW4YGR279C TPD3P31383 635 aa6.65□□□□□ -1.34
SCW4YGR279C YJR008WP47085 338 aa6.65□□□□□ -1.34
SCW4YGR279C DNM1P54861 757 aa6.65□□□□□ -1.34
SCW4YGR279C RTT109Q07794 436 aa6.65□□□□□ -1.34
SCW4YGR279C YOL057WQ08225 711 aa6.65□□□□□ -1.34
SCW4YGR279C NOP53Q12080 455 aaKnown RBP6.65□□□□□ -1.34
SCW4YGR279C SUI2P20459 304 aaKnown RBP6.64□□□□□ -1.35
SCW4YGR279C ALD3P54114 506 aa6.64□□□□□ -1.35
SCW4YGR279C BUG1Q12191 341 aa6.64□□□□□ -1.35
SCW4YGR279C RRT14P40470 206 aa6.63□□□□□ -1.35
SCW4YGR279C DIB1Q06819 143 aaPredicted RBP6.63□□□□□ -1.35
SCW4YGR279C GRE2Q12068 342 aaKnown RBP6.63□□□□□ -1.35
SCW4YGR279C RVB2Q12464 471 aaKnown RBP6.63□□□□□ -1.35
SCW4YGR279C RAD2P07276 1031 aa6.62□□□□□ -1.35
SCW4YGR279C SRT1Q03175 343 aa6.62□□□□□ -1.35
SCW4YGR279C COQ4O13525 335 aa6.61□□□□□ -1.35
SCW4YGR279C HGH1P48362 394 aaKnown RBP6.61□□□□□ -1.35
SCW4YGR279C SSK22P25390 1331 aaPredicted RBP6.6□□□□□ -1.35
SCW4YGR279C SSA2P10592 639 aaKnown RBP6.6□□□□□ -1.35
SCW4YGR279C YBL086CP38177 466 aa6.6□□□□□ -1.35
SCW4YGR279C CST6P40535 587 aa6.6□□□□□ -1.35
SCW4YGR279C TUM1Q08686 304 aaKnown RBP6.6□□□□□ -1.35
SCW4YGR279C SUP35P05453 685 aaKnown RBP6.59□□□□□ -1.35
SCW4YGR279C RPS19AP07280 144 aaKnown RBP6.59□□□□□ -1.35
SCW4YGR279C RPS19BP07281 144 aaPredicted RBP6.59□□□□□ -1.35
SCW4YGR279C YPP1P46951 817 aa6.59□□□□□ -1.35
SCW4YGR279C LYS4P49367 693 aaPredicted RBP6.59□□□□□ -1.35
SCW4YGR279C YLR271WQ06152 274 aa6.59□□□□□ -1.35
SCW4YGR279C YDR306CQ06640 478 aa6.59□□□□□ -1.35
SCW4YGR279C ALE1Q08548 619 aa6.59□□□□□ -1.35
SCW4YGR279C NYV1Q12255 253 aa6.59□□□□□ -1.35
SCW4YGR279C RPS9BP05755 195 aaKnown RBP6.58□□□□□ -1.36
SCW4YGR279C SET1P38827 1080 aaKnown RBP6.58□□□□□ -1.36
SCW4YGR279C RAT1Q02792 1006 aaKnown RBP6.58□□□□□ -1.36
SCW4YGR279C RIM15P43565 1770 aa6.58□□□□□ -1.36
SCW4YGR279C MAP2P38174 421 aaKnown RBP6.57□□□□□ -1.36
SCW4YGR279C TOS1P38288 455 aa6.57□□□□□ -1.36
SCW4YGR279C YIL092WP40497 633 aa6.57□□□□□ -1.36
Retrieved 100 of 5,963 RNA–protein pairs in 37.3 ms