RNA–Protein interactions for RNA: YGR244C

LSC2, Transcript of Beta subunit of succinyl-CoA ligase, yeastyeast

Gene LSC2, Length 1,284 nt, Biotype protein coding, Subcellular localisation Mitochondria .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSC2YGR244C NSE3Q05541 303 aa12.43□□□□□ -0.42
LSC2YGR244C KCC4P25389 1037 aa12.42□□□□□ -0.42
LSC2YGR244C HEF3P53978 1044 aaKnown RBP12.42□□□□□ -0.42
LSC2YGR244C MAK21Q12176 1025 aaKnown RBP12.42□□□□□ -0.42
LSC2YGR244C RAD2P07276 1031 aa12.41□□□□□ -0.42
LSC2YGR244C YBR287WP38355 427 aa12.41□□□□□ -0.42
LSC2YGR244C FPR3P38911 411 aaKnown RBP12.41□□□□□ -0.42
LSC2YGR244C FRK1Q03002 865 aaPredicted RBP12.41□□□□□ -0.42
LSC2YGR244C INP54Q08227 384 aaKnown RBP12.41□□□□□ -0.42
LSC2YGR244C UGA3P26370 528 aa12.4□□□□□ -0.42
LSC2YGR244C ADE16P54113 591 aaKnown RBP12.4□□□□□ -0.42
LSC2YGR244C NAB6Q03735 1134 aaKnown RBP RIP-Chip data12.39□□□□□ -0.43not detected
LSC2YGR244C NUP145P49687 1317 aa12.38□□□□□ -0.43
LSC2YGR244C OSM1P21375 501 aaKnown RBP12.38□□□□□ -0.43
LSC2YGR244C DOT5P40553 215 aa12.38□□□□□ -0.43
LSC2YGR244C YJL181WP46987 611 aa12.38□□□□□ -0.43
LSC2YGR244C LAM6Q08001 693 aa12.38□□□□□ -0.43
LSC2YGR244C BMS1Q08965 1183 aaKnown RBP12.37□□□□□ -0.43
LSC2YGR244C YRF1-3P0CX14 1859 aa12.36□□□□□ -0.43
LSC2YGR244C YRF1-7P0CX15 1859 aa12.36□□□□□ -0.43
LSC2YGR244C YRF1-6P53819 1859 aa12.36□□□□□ -0.43
LSC2YGR244C COBP00163 385 aa12.36□□□□□ -0.43
LSC2YGR244C DAL5P15365 543 aa12.36□□□□□ -0.43
LSC2YGR244C YBP2P53169 641 aa12.36□□□□□ -0.43
LSC2YGR244C NOP2P40991 618 aaKnown RBP12.35□□□□□ -0.43
LSC2YGR244C BUD27P43573 796 aaKnown RBP RIP-Chip data12.35□□□□□ -0.43not detected
LSC2YGR244C YFR016CP43597 1233 aaKnown RBP12.35□□□□□ -0.43
LSC2YGR244C PRP40P33203 583 aaKnown RBP12.34□□□□□ -0.43
LSC2YGR244C FOX2Q02207 900 aaKnown RBP12.34□□□□□ -0.43
LSC2YGR244C COQ4O13525 335 aa12.33□□□□□ -0.44
LSC2YGR244C ALE1Q08548 619 aa12.33□□□□□ -0.44
LSC2YGR244C EDE1P34216 1381 aa12.32□□□□□ -0.44
LSC2YGR244C SRT1Q03175 343 aa12.32□□□□□ -0.44
LSC2YGR244C RMT2Q03305 412 aa12.31□□□□□ -0.44
LSC2YGR244C YIL092WP40497 633 aa12.3□□□□□ -0.44
LSC2YGR244C RPN11P43588 306 aaKnown RBP12.3□□□□□ -0.44
LSC2YGR244C YMR074CQ04773 145 aa12.3□□□□□ -0.44
LSC2YGR244C NOP8Q08287 484 aaPredicted RBP12.3□□□□□ -0.44
LSC2YGR244C RAD4P14736 754 aa12.29□□□□□ -0.44
LSC2YGR244C UBP1P25037 809 aa12.29□□□□□ -0.44
LSC2YGR244C GRX1P25373 110 aaKnown RBP12.27□□□□□ -0.45
LSC2YGR244C GLN1P32288 370 aaKnown RBP12.27□□□□□ -0.45
LSC2YGR244C YKR075CP36155 307 aa12.26□□□□□ -0.45
LSC2YGR244C YOL057WQ08225 711 aa12.26□□□□□ -0.45
LSC2YGR244C LYS2P07702 1392 aa12.26□□□□□ -0.45
LSC2YGR244C YPP1P46951 817 aa12.24□□□□□ -0.45
LSC2YGR244C NOP53Q12080 455 aaKnown RBP12.24□□□□□ -0.45
LSC2YGR244C SSP2Q08646 371 aa12.22□□□□□ -0.45
LSC2YGR244C MSB4Q12317 492 aa12.22□□□□□ -0.45
LSC2YGR244C MRP7P12687 371 aa12.21□□□□□ -0.45
LSC2YGR244C MDG1P53885 366 aa12.21□□□□□ -0.45
LSC2YGR244C VPS64Q03944 604 aa12.21□□□□□ -0.45
LSC2YGR244C PUF6Q04373 656 aaKnown RBP12.21□□□□□ -0.45
LSC2YGR244C TRP5P00931 707 aaKnown RBP12.2□□□□□ -0.46
LSC2YGR244C POL32P47110 350 aa12.2□□□□□ -0.46
LSC2YGR244C ZDS2P54786 942 aa12.2□□□□□ -0.46
LSC2YGR244C DNM1P54861 757 aa12.2□□□□□ -0.46
LSC2YGR244C CSI1Q04368 295 aa12.19□□□□□ -0.46
LSC2YGR244C TUM1Q08686 304 aaKnown RBP12.19□□□□□ -0.46
LSC2YGR244C BUD31P25337 157 aaPredicted RBP12.18□□□□□ -0.46
LSC2YGR244C YNG2P38806 282 aaKnown RBP12.17□□□□□ -0.46
LSC2YGR244C DIP2Q12220 943 aaPredicted RBP12.17□□□□□ -0.46
LSC2YGR244C RIM15P43565 1770 aa12.16□□□□□ -0.46
LSC2YGR244C NUP133P36161 1157 aa12.16□□□□□ -0.46
LSC2YGR244C NPR2P39923 615 aa12.16□□□□□ -0.46
LSC2YGR244C CST6P40535 587 aa12.16□□□□□ -0.46
LSC2YGR244C RAD24P32641 659 aa12.15□□□□□ -0.46
LSC2YGR244C PKH1Q03407 766 aa12.15□□□□□ -0.46
LSC2YGR244C GRE2Q12068 342 aaKnown RBP12.15□□□□□ -0.46
LSC2YGR244C PHM7Q12252 991 aa12.15□□□□□ -0.46
LSC2YGR244C SER1P33330 395 aaKnown RBP12.14□□□□□ -0.47
LSC2YGR244C TEA1P47988 759 aa12.14□□□□□ -0.47
LSC2YGR244C RPS19AP07280 144 aaKnown RBP12.13□□□□□ -0.47
LSC2YGR244C RPS19BP07281 144 aaPredicted RBP12.13□□□□□ -0.47
LSC2YGR244C APL2P36000 726 aaPredicted RBP12.13□□□□□ -0.47
LSC2YGR244C YGR122WP53272 402 aa12.13□□□□□ -0.47
LSC2YGR244C YDR306CQ06640 478 aa12.13□□□□□ -0.47
LSC2YGR244C YGL082WP53155 381 aa12.12□□□□□ -0.47
LSC2YGR244C BUG1Q12191 341 aa12.12□□□□□ -0.47
LSC2YGR244C PRI1P10363 409 aa12.11□□□□□ -0.47
LSC2YGR244C SPO1P53541 631 aa12.11□□□□□ -0.47
LSC2YGR244C SWC3P31376 625 aa12.1□□□□□ -0.47
LSC2YGR244C LYS4P49367 693 aaPredicted RBP12.1□□□□□ -0.47
LSC2YGR244C SWI1P09547 1314 aa12.1□□□□□ -0.47
LSC2YGR244C BOI2P39969 1040 aa12.08□□□□□ -0.48
LSC2YGR244C ALD2P47771 506 aa12.08□□□□□ -0.48
LSC2YGR244C NMD2P38798 1089 aaKnown RBP12.07□□□□□ -0.48
LSC2YGR244C YPR204WQ08995 1032 aa12.07□□□□□ -0.48
LSC2YGR244C BDF1P35817 686 aa12.06□□□□□ -0.48
LSC2YGR244C YLR271WQ06152 274 aa12.06□□□□□ -0.48
LSC2YGR244C NYV1Q12255 253 aa12.06□□□□□ -0.48
LSC2YGR244C SUP35P05453 685 aaKnown RBP12.05□□□□□ -0.48
LSC2YGR244C RPC31P17890 251 aa12.05□□□□□ -0.48
LSC2YGR244C ALD3P54114 506 aa12.05□□□□□ -0.48
LSC2YGR244C ECM16Q04217 1267 aaKnown RBP12.05□□□□□ -0.48
LSC2YGR244C LPD1P09624 499 aaKnown RBP12.04□□□□□ -0.48
LSC2YGR244C ARG8P18544 423 aa12.04□□□□□ -0.48
LSC2YGR244C YJR008WP47085 338 aa12.04□□□□□ -0.48
LSC2YGR244C HGH1P48362 394 aaKnown RBP12.04□□□□□ -0.48
LSC2YGR244C UGA2P38067 497 aa12.03□□□□□ -0.48
Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms