RNA–Protein interactions for RNA: YGR112W

SHY1, Transcript of Mitochondrial inner membrane protein required for complex IV assembly, yeastyeast

Gene SHY1, Length 1,170 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHY1YGR112W COQ4O13525 335 aa11.56□□□□□ -0.56
SHY1YGR112W IME2P32581 645 aa11.56□□□□□ -0.56
SHY1YGR112W RCR1P38212 213 aa11.56□□□□□ -0.56
SHY1YGR112W YIR014WP40570 242 aa11.56□□□□□ -0.56
SHY1YGR112W XKS1P42826 600 aa11.56□□□□□ -0.56
SHY1YGR112W TCB1Q12466 1186 aa11.56□□□□□ -0.56
SHY1YGR112W YFR016CP43597 1233 aaKnown RBP11.55□□□□□ -0.56
SHY1YGR112W YPP1P46951 817 aa11.55□□□□□ -0.56
SHY1YGR112W CSI1Q04368 295 aa11.54□□□□□ -0.56
SHY1YGR112W MIF2P35201 549 aa11.53□□□□□ -0.56
SHY1YGR112W NSE3Q05541 303 aa11.53□□□□□ -0.56
SHY1YGR112W UGA3P26370 528 aa11.52□□□□□ -0.57
SHY1YGR112W ILV3P39522 585 aaKnown RBP11.52□□□□□ -0.57
SHY1YGR112W KCC4P25389 1037 aa11.51□□□□□ -0.57
SHY1YGR112W YNG2P38806 282 aaKnown RBP11.5□□□□□ -0.57
SHY1YGR112W NUP145P49687 1317 aa11.5□□□□□ -0.57
SHY1YGR112W INP54Q08227 384 aaKnown RBP11.49□□□□□ -0.57
SHY1YGR112W RSF2P46974 1380 aa11.49□□□□□ -0.57
SHY1YGR112W RPS19AP07280 144 aaKnown RBP11.48□□□□□ -0.57
SHY1YGR112W RPS19BP07281 144 aaPredicted RBP11.48□□□□□ -0.57
SHY1YGR112W SPO1P53541 631 aa11.48□□□□□ -0.57
SHY1YGR112W YOL057WQ08225 711 aa11.48□□□□□ -0.57
SHY1YGR112W LYS2P07702 1392 aa11.48□□□□□ -0.57
SHY1YGR112W ECM16Q04217 1267 aaKnown RBP11.47□□□□□ -0.57
SHY1YGR112W RAD4P14736 754 aa11.46□□□□□ -0.57
SHY1YGR112W YGR122WP53272 402 aa11.46□□□□□ -0.57
SHY1YGR112W NOP8Q08287 484 aaPredicted RBP11.46□□□□□ -0.57
SHY1YGR112W RAD24P32641 659 aa11.45□□□□□ -0.58
SHY1YGR112W REB1P21538 810 aa11.44□□□□□ -0.58
SHY1YGR112W ENT1Q12518 454 aa11.44□□□□□ -0.58
SHY1YGR112W MRP7P12687 371 aa11.43□□□□□ -0.58
SHY1YGR112W EAF7P53911 425 aaKnown RBP11.43□□□□□ -0.58
SHY1YGR112W NKP2Q06162 153 aa11.43□□□□□ -0.58
SHY1YGR112W NMD2P38798 1089 aaKnown RBP11.42□□□□□ -0.58
SHY1YGR112W YDR306CQ06640 478 aa11.42□□□□□ -0.58
SHY1YGR112W ALE1Q08548 619 aa11.42□□□□□ -0.58
SHY1YGR112W PCT1P13259 424 aa11.41□□□□□ -0.58
SHY1YGR112W IES2P40154 320 aa11.41□□□□□ -0.58
SHY1YGR112W ADE16P54113 591 aaKnown RBP11.41□□□□□ -0.58
SHY1YGR112W OSM1P21375 501 aaKnown RBP11.4□□□□□ -0.58
SHY1YGR112W RFC1P38630 861 aaKnown RBP11.4□□□□□ -0.58
SHY1YGR112W ZDS2P54786 942 aa11.4□□□□□ -0.58
SHY1YGR112W MEC3Q02574 474 aa11.4□□□□□ -0.58
SHY1YGR112W YRF1-3P0CX14 1859 aa11.4□□□□□ -0.59
SHY1YGR112W YRF1-7P0CX15 1859 aa11.4□□□□□ -0.59
SHY1YGR112W YRF1-6P53819 1859 aa11.4□□□□□ -0.59
SHY1YGR112W RAD50P12753 1312 aa11.38□□□□□ -0.59
SHY1YGR112W SWC3P31376 625 aa11.38□□□□□ -0.59
SHY1YGR112W GCD7P32502 381 aaPredicted RBP11.38□□□□□ -0.59
SHY1YGR112W BOI2P39969 1040 aa11.38□□□□□ -0.59
SHY1YGR112W ENV9Q08651 330 aa11.38□□□□□ -0.59
SHY1YGR112W YKL133CP36066 463 aa11.36□□□□□ -0.59
SHY1YGR112W CLC1P17891 233 aa11.35□□□□□ -0.59
SHY1YGR112W HGH1P48362 394 aaKnown RBP11.35□□□□□ -0.59
SHY1YGR112W DNM1P54861 757 aa11.35□□□□□ -0.59
SHY1YGR112W NUP133P36161 1157 aa11.34□□□□□ -0.59
SHY1YGR112W CST6P40535 587 aa11.34□□□□□ -0.59
SHY1YGR112W FRK1Q03002 865 aaPredicted RBP11.34□□□□□ -0.59
SHY1YGR112W ATG13Q06628 738 aa11.34□□□□□ -0.59
SHY1YGR112W RLF2Q12495 606 aa11.34□□□□□ -0.59
SHY1YGR112W DLD1P32891 587 aa11.33□□□□□ -0.6
SHY1YGR112W YBP2P53169 641 aa11.33□□□□□ -0.6
SHY1YGR112W APP1P53933 587 aa11.33□□□□□ -0.6
SHY1YGR112W GCR2Q01722 534 aa11.33□□□□□ -0.6
SHY1YGR112W SWI1P09547 1314 aa11.33□□□□□ -0.6
SHY1YGR112W CDC16P09798 840 aa11.32□□□□□ -0.6
SHY1YGR112W SNF7P39929 240 aaKnown RBP11.32□□□□□ -0.6
SHY1YGR112W RMT2Q03305 412 aa11.32□□□□□ -0.6
SHY1YGR112W VPS24P36095 224 aaKnown RBP11.31□□□□□ -0.6
SHY1YGR112W BRN1P38170 754 aa11.31□□□□□ -0.6
SHY1YGR112W DJP1P40564 432 aa11.31□□□□□ -0.6
SHY1YGR112W BDP1P46678 594 aa11.31□□□□□ -0.6
SHY1YGR112W YJR008WP47085 338 aa11.31□□□□□ -0.6
SHY1YGR112W VPS64Q03944 604 aa11.3□□□□□ -0.6
SHY1YGR112W ROM2P51862 1356 aaKnown RBP11.29□□□□□ -0.6
SHY1YGR112W YAH1Q12184 172 aaKnown RBP11.29□□□□□ -0.6
SHY1YGR112W ROX1P25042 368 aa11.28□□□□□ -0.6
SHY1YGR112W NOP53Q12080 455 aaKnown RBP11.28□□□□□ -0.6
SHY1YGR112W LPD1P09624 499 aaKnown RBP11.27□□□□□ -0.61
SHY1YGR112W APL2P36000 726 aaPredicted RBP11.27□□□□□ -0.61
SHY1YGR112W UBP12P39538 1254 aa11.27□□□□□ -0.61
SHY1YGR112W HXT13P39924 564 aa11.27□□□□□ -0.61
SHY1YGR112W IMH1Q06704 911 aaKnown RBP11.27□□□□□ -0.61
SHY1YGR112W LSP1Q12230 341 aaKnown RBP11.27□□□□□ -0.61
SHY1YGR112W VAS1P07806 1104 aaKnown RBP11.26□□□□□ -0.61
SHY1YGR112W ITC1P53125 1264 aa11.26□□□□□ -0.61
SHY1YGR112W TUM1Q08686 304 aaKnown RBP11.26□□□□□ -0.61
SHY1YGR112W SRS2P12954 1174 aa11.25□□□□□ -0.61
SHY1YGR112W HXT17P53631 564 aa11.25□□□□□ -0.61
SHY1YGR112W SSP2Q08646 371 aa11.25□□□□□ -0.61
SHY1YGR112W COBP00163 385 aa11.24□□□□□ -0.61
SHY1YGR112W YFR006WP43590 535 aa11.24□□□□□ -0.61
SHY1YGR112W NCB2Q92317 146 aa11.24□□□□□ -0.61
SHY1YGR112W SET1P38827 1080 aaKnown RBP11.23□□□□□ -0.61
SHY1YGR112W YPR204WQ08995 1032 aa11.23□□□□□ -0.61
SHY1YGR112W MSP1P28737 362 aa11.22□□□□□ -0.61
SHY1YGR112W ECM21P38167 1117 aaKnown RBP11.22□□□□□ -0.61
SHY1YGR112W SSF1P38789 453 aaPredicted RBP11.22□□□□□ -0.61
SHY1YGR112W DOT5P40553 215 aa11.22□□□□□ -0.61
SHY1YGR112W FOX2Q02207 900 aaKnown RBP11.21□□□□□ -0.61
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms