RNA–Protein interactions for RNA: YGL011C

SCL1, Transcript of Alpha 1 subunit of the 20S proteasome, yeastyeast

Gene SCL1, Length 759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SCL1YGL011C EMP47P43555 445 aa8.09□□□□□ -1.11
SCL1YGL011C YPP1P46951 817 aa8.09□□□□□ -1.11
SCL1YGL011C YPR084WQ06821 456 aa8.09□□□□□ -1.11
SCL1YGL011C RDS2P19541 446 aaKnown RBP8.08□□□□□ -1.12
SCL1YGL011C GUT2P32191 649 aa8.06□□□□□ -1.12
SCL1YGL011C BCK2P33306 851 aa8.06□□□□□ -1.12
SCL1YGL011C VAC17P25591 423 aa8.05□□□□□ -1.12
SCL1YGL011C MRF1P30775 413 aaPredicted RBP8.05□□□□□ -1.12
SCL1YGL011C FRA1Q07825 749 aa8.05□□□□□ -1.12
SCL1YGL011C STE20Q03497 939 aaKnown RBP8.04□□□□□ -1.12
SCL1YGL011C SSA1P10591 642 aaKnown RBP8.03□□□□□ -1.12
SCL1YGL011C PEP12P32854 288 aa8.03□□□□□ -1.12
SCL1YGL011C SIS2P36024 562 aa8.03□□□□□ -1.12
SCL1YGL011C ITT1Q04638 464 aa8.03□□□□□ -1.12
SCL1YGL011C CST6P40535 587 aa8.02□□□□□ -1.13
SCL1YGL011C BDP1P46678 594 aa8.02□□□□□ -1.13
SCL1YGL011C PUS5Q06244 254 aa8.02□□□□□ -1.13
SCL1YGL011C NOB1Q08444 459 aaKnown RBP8.02□□□□□ -1.13
SCL1YGL011C FRK1Q03002 865 aaPredicted RBP8.01□□□□□ -1.13
SCL1YGL011C PUP1P25043 261 aa8□□□□□ -1.13
SCL1YGL011C KTR7P40504 517 aa8□□□□□ -1.13
SCL1YGL011C YML083CQ04526 418 aa8□□□□□ -1.13
SCL1YGL011C TGL4P36165 910 aa7.99□□□□□ -1.13
SCL1YGL011C APL6P46682 809 aa7.99□□□□□ -1.13
SCL1YGL011C MRX12P47084 519 aa7.99□□□□□ -1.13
SCL1YGL011C ENV9Q08651 330 aa7.99□□□□□ -1.13
SCL1YGL011C GEF1P37020 779 aa7.98□□□□□ -1.13
SCL1YGL011C KIP2P28743 706 aa7.97□□□□□ -1.13
SCL1YGL011C SOH1P38633 127 aa7.97□□□□□ -1.13
SCL1YGL011C XDJ1P39102 459 aa7.97□□□□□ -1.13
SCL1YGL011C YEL077CQ3E7X8 1277 aa7.96□□□□□ -1.14
SCL1YGL011C IXR1P33417 597 aa7.95□□□□□ -1.14
SCL1YGL011C ATG3P40344 310 aa7.95□□□□□ -1.14
SCL1YGL011C SYH1Q02875 849 aaKnown RBP7.93□□□□□ -1.14
SCL1YGL011C APP1P53933 587 aa7.92□□□□□ -1.14
SCL1YGL011C ECM23Q02710 187 aa7.92□□□□□ -1.14
SCL1YGL011C UTP13Q05946 817 aaKnown RBP7.92□□□□□ -1.14
SCL1YGL011C AMS1P22855 1083 aa7.91□□□□□ -1.14
SCL1YGL011C HAL5P38970 855 aaKnown RBP7.91□□□□□ -1.14
SCL1YGL011C GAL2P13181 574 aa7.9□□□□□ -1.14
SCL1YGL011C ISR1Q06098 443 aaKnown RBP7.9□□□□□ -1.14
SCL1YGL011C RPL34AP87262 121 aaPredicted RBP7.89□□□□□ -1.15
SCL1YGL011C ATG20Q07528 640 aa7.89□□□□□ -1.15
SCL1YGL011C EMW1P42842 904 aaKnown RBP7.88□□□□□ -1.15
SCL1YGL011C UBX7P38349 436 aa7.87□□□□□ -1.15
SCL1YGL011C CLA4P48562 842 aa7.87□□□□□ -1.15
SCL1YGL011C RAS1P01119 309 aa7.86□□□□□ -1.15
SCL1YGL011C PHO87P25360 923 aa7.86□□□□□ -1.15
SCL1YGL011C MIP1P15801 1254 aa7.85□□□□□ -1.15
SCL1YGL011C ACS2P52910 683 aaKnown RBP7.85□□□□□ -1.15
SCL1YGL011C CBC2Q08920 208 aaKnown RBP RIP-Chip data7.85□□□□□ -1.15not detected
SCL1YGL011C HED1Q03937 162 aa7.84□□□□□ -1.15
SCL1YGL011C PDI1P17967 522 aaKnown RBP7.83□□□□□ -1.16
SCL1YGL011C MRT4P33201 236 aaKnown RBP7.83□□□□□ -1.16
SCL1YGL011C MKS1P34072 584 aa7.82□□□□□ -1.16
SCL1YGL011C HDA3Q06623 655 aa7.82□□□□□ -1.16
SCL1YGL011C HAP4P14064 554 aa7.81□□□□□ -1.16
SCL1YGL011C FBP26P32604 452 aa7.81□□□□□ -1.16
SCL1YGL011C ROM1P53046 1155 aa7.81□□□□□ -1.16
SCL1YGL011C TSC13Q99190 310 aa7.81□□□□□ -1.16
SCL1YGL011C CDC3P32457 520 aaKnown RBP7.8□□□□□ -1.16
SCL1YGL011C AIM9P40053 627 aaKnown RBP7.8□□□□□ -1.16
SCL1YGL011C SLX8P40072 274 aa7.8□□□□□ -1.16
SCL1YGL011C ISU1Q03020 165 aa7.8□□□□□ -1.16
SCL1YGL011C YML020WQ03722 664 aa7.8□□□□□ -1.16
SCL1YGL011C MET32Q12041 191 aa7.8□□□□□ -1.16
SCL1YGL011C YBL086CP38177 466 aa7.79□□□□□ -1.16
SCL1YGL011C DFG5Q05031 458 aa7.79□□□□□ -1.16
SCL1YGL011C AIR1P40507 360 aaKnown RBP7.78□□□□□ -1.16
SCL1YGL011C GAS4Q08271 471 aa7.78□□□□□ -1.16
SCL1YGL011C UTR2P32623 467 aa7.77□□□□□ -1.17
SCL1YGL011C YFL034WP43564 1073 aa7.77□□□□□ -1.17
SCL1YGL011C DPS1P04802 557 aaKnown RBP7.76□□□□□ -1.17
SCL1YGL011C SPT2P06843 333 aaPredicted RBP7.76□□□□□ -1.17
SCL1YGL011C TPS3P38426 1054 aaKnown RBP7.76□□□□□ -1.17
SCL1YGL011C NTH2P35172 780 aa7.75□□□□□ -1.17
SCL1YGL011C STE6P12866 1290 aa7.74□□□□□ -1.17
SCL1YGL011C CDC4P07834 779 aa7.73□□□□□ -1.17
SCL1YGL011C RPS6AP0CX37 236 aaKnown RBP7.73□□□□□ -1.17
SCL1YGL011C RPS6BP0CX38 236 aaPredicted RBP7.73□□□□□ -1.17
SCL1YGL011C DAT1P13483 248 aaKnown RBP7.73□□□□□ -1.17
SCL1YGL011C CWC15Q03772 175 aaKnown RBP7.73□□□□□ -1.17
SCL1YGL011C NOP8Q08287 484 aaPredicted RBP7.73□□□□□ -1.17
SCL1YGL011C SWI5P08153 709 aa7.72□□□□□ -1.17
SCL1YGL011C PUF6Q04373 656 aaKnown RBP7.72□□□□□ -1.17
SCL1YGL011C BDS1Q08347 646 aa7.72□□□□□ -1.17
SCL1YGL011C WTM2Q12206 467 aa7.72□□□□□ -1.17
SCL1YGL011C HAT1Q12341 374 aa7.72□□□□□ -1.17
SCL1YGL011C CYT1P07143 309 aa7.71□□□□□ -1.18
SCL1YGL011C VAN1P23642 535 aa7.71□□□□□ -1.18
SCL1YGL011C TBS1P38114 1094 aa7.7□□□□□ -1.18
SCL1YGL011C SSF1P38789 453 aaPredicted RBP7.69□□□□□ -1.18
SCL1YGL011C PUN1Q06991 263 aa7.69□□□□□ -1.18
SCL1YGL011C AFT1P22149 690 aa7.68□□□□□ -1.18
SCL1YGL011C UBP1P25037 809 aa7.68□□□□□ -1.18
SCL1YGL011C SUV3P32580 737 aa7.68□□□□□ -1.18
SCL1YGL011C ASH1P34233 588 aa7.68□□□□□ -1.18
SCL1YGL011C TRS33Q99394 268 aa7.68□□□□□ -1.18
SCL1YGL011C RPP2BP02400 110 aaKnown RBP7.67□□□□□ -1.18
SCL1YGL011C UGA3P26370 528 aa7.67□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms