RNA–Protein interactions for RNA: YER058W

PET117, Transcript of Protein required for assembly of cytochrome c oxidase, yeastyeast

Gene PET117, Length 324 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PET117YER058W UGA3P26370 528 aa8.89□□□□□ -0.99
PET117YER058W INP54Q08227 384 aaKnown RBP8.89□□□□□ -0.99
PET117YER058W MAK21Q12176 1025 aaKnown RBP8.89□□□□□ -0.99
PET117YER058W KCC4P25389 1037 aa8.88□□□□□ -0.99
PET117YER058W NSE3Q05541 303 aa8.88□□□□□ -0.99
PET117YER058W NUP145P49687 1317 aa8.87□□□□□ -0.99
PET117YER058W BUD27P43573 796 aaKnown RBP RIP-Chip data8.87□□□□□ -0.99not detected
PET117YER058W LYS2P07702 1392 aa8.86□□□□□ -0.99
PET117YER058W RAD2P07276 1031 aa8.86□□□□□ -0.99
PET117YER058W RRT14P40470 206 aa8.86□□□□□ -0.99
PET117YER058W ADE16P54113 591 aaKnown RBP8.86□□□□□ -0.99
PET117YER058W ATG13Q06628 738 aa8.86□□□□□ -0.99
PET117YER058W OSM1P21375 501 aaKnown RBP8.84□□□□□ -0.99
PET117YER058W FRK1Q03002 865 aaPredicted RBP8.84□□□□□ -0.99
PET117YER058W FPR3P38911 411 aaKnown RBP8.83□□□□□ -1
PET117YER058W DOT5P40553 215 aa8.83□□□□□ -1
PET117YER058W NOP2P40991 618 aaKnown RBP8.83□□□□□ -1
PET117YER058W BMS1Q08965 1183 aaKnown RBP8.83□□□□□ -1
PET117YER058W FOX2Q02207 900 aaKnown RBP8.82□□□□□ -1
PET117YER058W YRF1-3P0CX14 1859 aa8.81□□□□□ -1
PET117YER058W YRF1-7P0CX15 1859 aa8.81□□□□□ -1
PET117YER058W YRF1-6P53819 1859 aa8.81□□□□□ -1
PET117YER058W YIL092WP40497 633 aa8.81□□□□□ -1
PET117YER058W YBP2P53169 641 aa8.81□□□□□ -1
PET117YER058W SRT1Q03175 343 aa8.81□□□□□ -1
PET117YER058W LAM6Q08001 693 aa8.81□□□□□ -1
PET117YER058W COQ4O13525 335 aa8.8□□□□□ -1
PET117YER058W COBP00163 385 aa8.8□□□□□ -1
PET117YER058W FUN12P39730 1002 aaKnown RBP8.8□□□□□ -1
PET117YER058W DAL5P15365 543 aa8.79□□□□□ -1
PET117YER058W PRP40P33203 583 aaKnown RBP8.79□□□□□ -1
PET117YER058W RMT2Q03305 412 aa8.79□□□□□ -1
PET117YER058W YMR074CQ04773 145 aa8.79□□□□□ -1
PET117YER058W GRX1P25373 110 aaKnown RBP8.78□□□□□ -1
PET117YER058W YKR075CP36155 307 aa8.78□□□□□ -1
PET117YER058W YBR287WP38355 427 aa8.78□□□□□ -1
PET117YER058W YJL181WP46987 611 aa8.78□□□□□ -1
PET117YER058W YOL057WQ08225 711 aa8.78□□□□□ -1
PET117YER058W ALE1Q08548 619 aa8.78□□□□□ -1
PET117YER058W RAD4P14736 754 aa8.76□□□□□ -1.01
PET117YER058W YPP1P46951 817 aa8.76□□□□□ -1.01
PET117YER058W MDG1P53885 366 aa8.76□□□□□ -1.01
PET117YER058W UBP1P25037 809 aa8.75□□□□□ -1.01
PET117YER058W RPN11P43588 306 aaKnown RBP8.75□□□□□ -1.01
PET117YER058W FAP1P53971 965 aa8.75□□□□□ -1.01
PET117YER058W GLN1P32288 370 aaKnown RBP8.74□□□□□ -1.01
PET117YER058W TFA1P36100 482 aa8.74□□□□□ -1.01
PET117YER058W DNM1P54861 757 aa8.74□□□□□ -1.01
PET117YER058W SSP2Q08646 371 aa8.74□□□□□ -1.01
PET117YER058W NOP53Q12080 455 aaKnown RBP8.74□□□□□ -1.01
PET117YER058W POL32P47110 350 aa8.73□□□□□ -1.01
PET117YER058W NOP8Q08287 484 aaPredicted RBP8.73□□□□□ -1.01
PET117YER058W MRP7P12687 371 aa8.72□□□□□ -1.01
PET117YER058W YDR306CQ06640 478 aa8.72□□□□□ -1.01
PET117YER058W MSB4Q12317 492 aa8.72□□□□□ -1.01
PET117YER058W RPS19AP07280 144 aaKnown RBP8.71□□□□□ -1.02
PET117YER058W RPS19BP07281 144 aaPredicted RBP8.71□□□□□ -1.02
PET117YER058W PHM7Q12252 991 aa8.71□□□□□ -1.02
PET117YER058W TRP5P00931 707 aaKnown RBP8.7□□□□□ -1.02
PET117YER058W CST6P40535 587 aa8.7□□□□□ -1.02
PET117YER058W CSI1Q04368 295 aa8.7□□□□□ -1.02
PET117YER058W PUF6Q04373 656 aaKnown RBP8.7□□□□□ -1.02
PET117YER058W TUM1Q08686 304 aaKnown RBP8.7□□□□□ -1.02
PET117YER058W BUD31P25337 157 aaPredicted RBP8.69□□□□□ -1.02
PET117YER058W NPR2P39923 615 aa8.69□□□□□ -1.02
PET117YER058W YJR008WP47085 338 aa8.69□□□□□ -1.02
PET117YER058W YNG2P38806 282 aaKnown RBP8.68□□□□□ -1.02
PET117YER058W RAD24P32641 659 aa8.67□□□□□ -1.02
PET117YER058W NUP133P36161 1157 aa8.67□□□□□ -1.02
PET117YER058W HGH1P48362 394 aaKnown RBP8.67□□□□□ -1.02
PET117YER058W ZDS2P54786 942 aa8.67□□□□□ -1.02
PET117YER058W SWI1P09547 1314 aa8.66□□□□□ -1.02
PET117YER058W VPS64Q03944 604 aa8.66□□□□□ -1.02
PET117YER058W GRE2Q12068 342 aaKnown RBP8.66□□□□□ -1.02
PET117YER058W BOI2P39969 1040 aa8.65□□□□□ -1.02
PET117YER058W TEA1P47988 759 aa8.65□□□□□ -1.02
PET117YER058W ECM16Q04217 1267 aaKnown RBP8.65□□□□□ -1.02
PET117YER058W YLR271WQ06152 274 aa8.65□□□□□ -1.02
PET117YER058W RIM15P43565 1770 aa8.65□□□□□ -1.02
PET117YER058W YGR122WP53272 402 aa8.64□□□□□ -1.03
PET117YER058W SPO1P53541 631 aa8.64□□□□□ -1.03
PET117YER058W YPR204WQ08995 1032 aa8.64□□□□□ -1.03
PET117YER058W BUG1Q12191 341 aa8.64□□□□□ -1.03
PET117YER058W ARG8P18544 423 aa8.63□□□□□ -1.03
PET117YER058W BDF1P35817 686 aa8.63□□□□□ -1.03
PET117YER058W SET1P38827 1080 aaKnown RBP8.63□□□□□ -1.03
PET117YER058W GTT3P39996 337 aa8.63□□□□□ -1.03
PET117YER058W GCD7P32502 381 aaPredicted RBP8.62□□□□□ -1.03
PET117YER058W SER1P33330 395 aaKnown RBP8.62□□□□□ -1.03
PET117YER058W APL2P36000 726 aaPredicted RBP8.62□□□□□ -1.03
PET117YER058W UTP22P53254 1237 aaPredicted RBP8.62□□□□□ -1.03
PET117YER058W PKH1Q03407 766 aa8.62□□□□□ -1.03
PET117YER058W NYV1Q12255 253 aa8.62□□□□□ -1.03
PET117YER058W PRI1P10363 409 aa8.61□□□□□ -1.03
PET117YER058W NMD2P38798 1089 aaKnown RBP8.61□□□□□ -1.03
PET117YER058W ALD2P47771 506 aa8.61□□□□□ -1.03
PET117YER058W SUP35P05453 685 aaKnown RBP8.6□□□□□ -1.03
PET117YER058W LPD1P09624 499 aaKnown RBP8.6□□□□□ -1.03
PET117YER058W SWC3P31376 625 aa8.6□□□□□ -1.03
PET117YER058W UBP12P39538 1254 aa8.6□□□□□ -1.03
Retrieved 100 of 5,963 RNA–protein pairs in 48.1 ms