RNA–Protein interactions for RNA: YDR477W

SNF1, Transcript of AMP-activated serine/threonine protein kinase, yeastyeast

Gene SNF1, Length 1,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF1YDR477W COG8Q04632 607 aa12.07□□□□□ -0.48
SNF1YDR477W BNI1P41832 1953 aa12.06□□□□□ -0.48
SNF1YDR477W BUB1P41695 1021 aaKnown RBP RIP-Chip data12.06□□□□□ -0.48not detected
SNF1YDR477W MTR4P47047 1073 aaKnown RBP12.06□□□□□ -0.48
SNF1YDR477W GYP7P48365 746 aa12.06□□□□□ -0.48
SNF1YDR477W RFC1P38630 861 aaKnown RBP12.05□□□□□ -0.48
SNF1YDR477W YNG2P38806 282 aaKnown RBP12.05□□□□□ -0.48
SNF1YDR477W SRT1Q03175 343 aa12.05□□□□□ -0.48
SNF1YDR477W CSI1Q04368 295 aa12.05□□□□□ -0.48
SNF1YDR477W GAS4Q08271 471 aa12.05□□□□□ -0.48
SNF1YDR477W HXT13P39924 564 aa12.05□□□□□ -0.48
SNF1YDR477W CIR1P42940 261 aa12.05□□□□□ -0.48
SNF1YDR477W RIA1P53893 1110 aa12.05□□□□□ -0.48
SNF1YDR477W AKL1P38080 1108 aaKnown RBP12.04□□□□□ -0.48
SNF1YDR477W PIL1P53252 339 aaKnown RBP12.04□□□□□ -0.48
SNF1YDR477W CPS1P27614 576 aa12.03□□□□□ -0.48
SNF1YDR477W YGL081WP53156 320 aa12.03□□□□□ -0.48
SNF1YDR477W BDH2P39713 417 aa12.03□□□□□ -0.48
SNF1YDR477W VPS20Q04272 221 aa12.03□□□□□ -0.48
SNF1YDR477W DUR1,2P32528 1835 aaKnown RBP12.02□□□□□ -0.48
SNF1YDR477W NMD2P38798 1089 aaKnown RBP12.02□□□□□ -0.49
SNF1YDR477W HXT17P53631 564 aa12.02□□□□□ -0.49
SNF1YDR477W MCM2P29469 868 aa12.01□□□□□ -0.49
SNF1YDR477W MDG1P53885 366 aa12.01□□□□□ -0.49
SNF1YDR477W RPS24AP0CX31 135 aaKnown RBP12□□□□□ -0.49
SNF1YDR477W RPS24BP0CX32 135 aaKnown RBP12□□□□□ -0.49
SNF1YDR477W YBR287WP38355 427 aa12□□□□□ -0.49
SNF1YDR477W RVS167P39743 482 aaKnown RBP12□□□□□ -0.49
SNF1YDR477W YNL050CP53952 270 aa12□□□□□ -0.49
SNF1YDR477W RPN12P32496 274 aa11.99□□□□□ -0.49
SNF1YDR477W DPS1P04802 557 aaKnown RBP11.98□□□□□ -0.49
SNF1YDR477W ZDS1P50111 915 aaKnown RBP11.98□□□□□ -0.49
SNF1YDR477W HST1P53685 503 aa11.98□□□□□ -0.49
SNF1YDR477W KRE33P53914 1056 aaKnown RBP11.98□□□□□ -0.49
SNF1YDR477W HRQ1Q05549 1077 aa11.98□□□□□ -0.49
SNF1YDR477W QCR6P00127 147 aa11.98□□□□□ -0.49
SNF1YDR477W ITT1Q04638 464 aa11.98□□□□□ -0.49
SNF1YDR477W RPS19AP07280 144 aaKnown RBP11.97□□□□□ -0.49
SNF1YDR477W RPS19BP07281 144 aaPredicted RBP11.97□□□□□ -0.49
SNF1YDR477W SIS2P36024 562 aa11.97□□□□□ -0.49
SNF1YDR477W AIM44Q99299 758 aa11.97□□□□□ -0.49
SNF1YDR477W RRP5Q05022 1729 aaKnown RBP11.96□□□□□ -0.49
SNF1YDR477W TRL1P09880 827 aaKnown RBP11.95□□□□□ -0.5
SNF1YDR477W NTH2P35172 780 aa11.95□□□□□ -0.5
SNF1YDR477W MAM1P40065 302 aa11.95□□□□□ -0.5
SNF1YDR477W YIL177CP40434 1758 aa11.95□□□□□ -0.5
SNF1YDR477W YJL225CP40889 1758 aa11.95□□□□□ -0.5
SNF1YDR477W RNR2P09938 399 aaKnown RBP11.94□□□□□ -0.5
SNF1YDR477W CDC16P09798 840 aa11.94□□□□□ -0.5
SNF1YDR477W LYS2P07702 1392 aa11.93□□□□□ -0.5
SNF1YDR477W BIK1P11709 440 aa11.93□□□□□ -0.5
SNF1YDR477W KEX1P09620 729 aa11.92□□□□□ -0.5
SNF1YDR477W MIC60P36112 540 aa11.92□□□□□ -0.5
SNF1YDR477W PRP43P53131 767 aaKnown RBP11.92□□□□□ -0.5
SNF1YDR477W YGR122WP53272 402 aa11.92□□□□□ -0.5
SNF1YDR477W ADE6P38972 1358 aaKnown RBP11.92□□□□□ -0.5
SNF1YDR477W BMS1Q08965 1183 aaKnown RBP11.92□□□□□ -0.5
SNF1YDR477W TPM2P40414 161 aa11.91□□□□□ -0.5
SNF1YDR477W APC11Q12157 165 aa11.91□□□□□ -0.5
SNF1YDR477W YRF1-2P40105 1681 aa11.9□□□□□ -0.5
SNF1YDR477W RAD24P32641 659 aa11.9□□□□□ -0.5
SNF1YDR477W HYR1P40581 163 aaKnown RBP11.9□□□□□ -0.5
SNF1YDR477W ESC2Q06340 456 aa11.9□□□□□ -0.5
SNF1YDR477W COQ4O13525 335 aa11.9□□□□□ -0.51
SNF1YDR477W VAS1P07806 1104 aaKnown RBP11.9□□□□□ -0.51
SNF1YDR477W RSM25P40496 264 aa11.9□□□□□ -0.51
SNF1YDR477W DID4P36108 232 aa11.89□□□□□ -0.51
SNF1YDR477W CWH41P53008 833 aa11.89□□□□□ -0.51
SNF1YDR477W YNR029CP53729 429 aaKnown RBP11.88□□□□□ -0.51
SNF1YDR477W GCD7P32502 381 aaPredicted RBP11.88□□□□□ -0.51
SNF1YDR477W RPN1P38764 993 aaKnown RBP11.88□□□□□ -0.51
SNF1YDR477W YGR130CP53278 816 aa11.87□□□□□ -0.51
SNF1YDR477W TY4B-HP0C2J7 1802 aa11.87□□□□□ -0.51
SNF1YDR477W TY4B-JP47024 1803 aa11.87□□□□□ -0.51
SNF1YDR477W HOS3Q02959 697 aaKnown RBP11.86□□□□□ -0.51
SNF1YDR477W SSL2Q00578 843 aa11.85□□□□□ -0.51
SNF1YDR477W BDP1P46678 594 aa11.84□□□□□ -0.51
SNF1YDR477W PEX19Q07418 342 aa11.84□□□□□ -0.51
SNF1YDR477W CYC8P14922 966 aa11.83□□□□□ -0.52
SNF1YDR477W MRPL10P36520 322 aa11.83□□□□□ -0.52
SNF1YDR477W KRI1P42846 591 aaKnown RBP11.83□□□□□ -0.52
SNF1YDR477W SWC3P31376 625 aa11.82□□□□□ -0.52
SNF1YDR477W HSP104P31539 908 aaKnown RBP11.82□□□□□ -0.52
SNF1YDR477W STU2P46675 888 aa11.82□□□□□ -0.52
SNF1YDR477W RAD26P40352 1085 aa11.82□□□□□ -0.52
SNF1YDR477W MPE1P35728 441 aaKnown RBP11.81□□□□□ -0.52
SNF1YDR477W NOP8Q08287 484 aaPredicted RBP11.81□□□□□ -0.52
SNF1YDR477W MBR1P23493 339 aa11.8□□□□□ -0.52
SNF1YDR477W TIM50Q02776 476 aa11.8□□□□□ -0.52
SNF1YDR477W BOI2P39969 1040 aa11.8□□□□□ -0.52
SNF1YDR477W PBY1P38254 753 aa11.78□□□□□ -0.52
SNF1YDR477W AOS1Q06624 347 aa11.78□□□□□ -0.52
SNF1YDR477W TCD1P38756 429 aa11.78□□□□□ -0.52
SNF1YDR477W RMD1Q03441 430 aa11.78□□□□□ -0.52
SNF1YDR477W URB1P34241 1764 aaKnown RBP11.78□□□□□ -0.52
SNF1YDR477W MRP7P12687 371 aa11.77□□□□□ -0.53
SNF1YDR477W FRS2P15625 503 aaKnown RBP11.77□□□□□ -0.53
SNF1YDR477W AAP1P37898 856 aaKnown RBP11.77□□□□□ -0.53
SNF1YDR477W CCT5P40413 562 aaKnown RBP11.77□□□□□ -0.53
SNF1YDR477W RPL19AP0CX82 189 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 12.1 ms