RNA–Protein interactions for RNA: YDR427W

RPN9, Transcript of Non-ATPase regulatory subunit of the 26S proteasome, yeastyeast

Gene RPN9, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN9YDR427W ARG82P07250 355 aa8.36□□□□□ -1.07
RPN9YDR427W YIR007WP40566 764 aa8.35□□□□□ -1.07
RPN9YDR427W TY1A-BLQ12266 440 aa8.35□□□□□ -1.07
RPN9YDR427W LSC2P53312 427 aa8.34□□□□□ -1.07
RPN9YDR427W VAC17P25591 423 aa8.33□□□□□ -1.08
RPN9YDR427W UBP2Q01476 1272 aa8.33□□□□□ -1.08
RPN9YDR427W AAD14P42884 376 aa8.31□□□□□ -1.08
RPN9YDR427W ESS1P22696 170 aa8.3□□□□□ -1.08
RPN9YDR427W YBL086CP38177 466 aa8.3□□□□□ -1.08
RPN9YDR427W HPF1Q05164 967 aa8.3□□□□□ -1.08
RPN9YDR427W YJU3P28321 313 aa8.25□□□□□ -1.09
RPN9YDR427W YJR098CP47139 656 aa8.24□□□□□ -1.09
RPN9YDR427W YNR021WP53723 404 aaKnown RBP8.24□□□□□ -1.09
RPN9YDR427W YPR204WQ08995 1032 aa8.24□□□□□ -1.09
RPN9YDR427W EMW1P42842 904 aaKnown RBP8.22□□□□□ -1.09
RPN9YDR427W APP1P53933 587 aa8.22□□□□□ -1.09
RPN9YDR427W DLD1P32891 587 aa8.21□□□□□ -1.1
RPN9YDR427W RSC30P38781 883 aa8.21□□□□□ -1.1
RPN9YDR427W TCB1Q12466 1186 aa8.21□□□□□ -1.1
RPN9YDR427W GLC3P32775 704 aa8.19□□□□□ -1.1
RPN9YDR427W ROG3P43602 733 aa8.19□□□□□ -1.1
RPN9YDR427W PKH3Q03306 898 aaPredicted RBP8.19□□□□□ -1.1
RPN9YDR427W DPH6Q12429 685 aa8.18□□□□□ -1.1
RPN9YDR427W ARG8P18544 423 aa8.17□□□□□ -1.1
RPN9YDR427W OSH7P38755 437 aa8.17□□□□□ -1.1
RPN9YDR427W TY1A-MR1Q04215 440 aa8.16□□□□□ -1.1
RPN9YDR427W MKS1P34072 584 aa8.15□□□□□ -1.1
RPN9YDR427W ITT1Q04638 464 aa8.15□□□□□ -1.1
RPN9YDR427W ICP55P40051 511 aa8.14□□□□□ -1.11
RPN9YDR427W FIG4P42837 879 aa8.12□□□□□ -1.11
RPN9YDR427W AIM7Q12156 149 aa8.12□□□□□ -1.11
RPN9YDR427W PUS1Q12211 544 aaKnown RBP8.12□□□□□ -1.11
RPN9YDR427W LYS5P50113 272 aa8.11□□□□□ -1.11
RPN9YDR427W DFG5Q05031 458 aa8.11□□□□□ -1.11
RPN9YDR427W KTR1P27810 393 aaKnown RBP8.1□□□□□ -1.11
RPN9YDR427W CSN12P47130 423 aa8.1□□□□□ -1.11
RPN9YDR427W BDS1Q08347 646 aa8.1□□□□□ -1.11
RPN9YDR427W TEC1P18412 486 aa8.08□□□□□ -1.12
RPN9YDR427W CCP1P00431 361 aa8.07□□□□□ -1.12
RPN9YDR427W FBP26P32604 452 aa8.06□□□□□ -1.12
RPN9YDR427W PHM7Q12252 991 aa8.06□□□□□ -1.12
RPN9YDR427W JJJ3P47138 172 aa8.04□□□□□ -1.12
RPN9YDR427W RAD59Q12223 238 aa8.04□□□□□ -1.12
RPN9YDR427W STE6P12866 1290 aa8.01□□□□□ -1.13
RPN9YDR427W LSB3P43603 459 aaKnown RBP8.01□□□□□ -1.13
RPN9YDR427W VTC4P47075 721 aa8.01□□□□□ -1.13
RPN9YDR427W CDC19P00549 500 aaKnown RBP8□□□□□ -1.13
RPN9YDR427W RPP2BP02400 110 aaKnown RBP7.98□□□□□ -1.13
RPN9YDR427W YPR084WQ06821 456 aa7.98□□□□□ -1.13
RPN9YDR427W GUT2P32191 649 aa7.97□□□□□ -1.13
RPN9YDR427W NAM8Q00539 523 aaKnown RBP7.97□□□□□ -1.13
RPN9YDR427W NSG2P53898 299 aa7.96□□□□□ -1.14
RPN9YDR427W ATG20Q07528 640 aa7.96□□□□□ -1.14
RPN9YDR427W MDJ1P35191 511 aa7.95□□□□□ -1.14
RPN9YDR427W DLD3P39976 496 aaKnown RBP7.95□□□□□ -1.14
RPN9YDR427W ISU1Q03020 165 aa7.95□□□□□ -1.14
RPN9YDR427W SSA2P10592 639 aaKnown RBP7.94□□□□□ -1.14
RPN9YDR427W DAL1P32375 460 aa7.94□□□□□ -1.14
RPN9YDR427W MAK16P10962 306 aaPredicted RBP7.93□□□□□ -1.14
RPN9YDR427W CUZ1P53899 274 aa7.93□□□□□ -1.14
RPN9YDR427W AI1P03875 834 aa7.92□□□□□ -1.14
RPN9YDR427W CEM1P39525 442 aa7.91□□□□□ -1.14
RPN9YDR427W NAF1P53919 492 aaKnown RBP7.9□□□□□ -1.14
RPN9YDR427W STE20Q03497 939 aaKnown RBP7.9□□□□□ -1.14
RPN9YDR427W THI72Q08579 599 aa7.9□□□□□ -1.14
RPN9YDR427W FRA1Q07825 749 aa7.87□□□□□ -1.15
RPN9YDR427W UBP15P50101 1230 aa7.86□□□□□ -1.15
RPN9YDR427W YMR265CQ03508 461 aaKnown RBP7.84□□□□□ -1.15
RPN9YDR427W LEU3P08638 886 aa7.83□□□□□ -1.16
RPN9YDR427W YFL066CP43538 392 aa7.83□□□□□ -1.16
RPN9YDR427W MSN5P52918 1224 aa7.83□□□□□ -1.16
RPN9YDR427W ADE12P80210 433 aaKnown RBP7.83□□□□□ -1.16
RPN9YDR427W DIT1P21623 536 aa7.82□□□□□ -1.16
RPN9YDR427W MRX12P47084 519 aa7.81□□□□□ -1.16
RPN9YDR427W SYT1Q06836 1226 aa7.81□□□□□ -1.16
RPN9YDR427W YPR053CQ6Q5F3 151 aa7.81□□□□□ -1.16
RPN9YDR427W CCT8P47079 568 aaKnown RBP7.8□□□□□ -1.16
RPN9YDR427W WTM2Q12206 467 aa7.79□□□□□ -1.16
RPN9YDR427W CSE4P36012 229 aa7.78□□□□□ -1.16
RPN9YDR427W AHP1P38013 176 aaKnown RBP7.78□□□□□ -1.16
RPN9YDR427W KRE33P53914 1056 aaKnown RBP7.78□□□□□ -1.16
RPN9YDR427W YDR461C-AQ2V2P7 80 aa7.78□□□□□ -1.16
RPN9YDR427W KIN1P13185 1064 aa7.77□□□□□ -1.17
RPN9YDR427W DAT1P13483 248 aaKnown RBP7.77□□□□□ -1.17
RPN9YDR427W SSN3P39073 555 aa7.77□□□□□ -1.17
RPN9YDR427W ISR1Q06098 443 aaKnown RBP7.77□□□□□ -1.17
RPN9YDR427W SPT2P06843 333 aaPredicted RBP7.76□□□□□ -1.17
RPN9YDR427W UTR2P32623 467 aa7.76□□□□□ -1.17
RPN9YDR427W SLA1P32790 1244 aa7.76□□□□□ -1.17
RPN9YDR427W TBS1P38114 1094 aa7.76□□□□□ -1.17
RPN9YDR427W NRD1P53617 575 aaKnown RBP RIP-Chip data7.76□□□□□ -1.17not detected
RPN9YDR427W SPT5P27692 1063 aaKnown RBP7.74□□□□□ -1.17
RPN9YDR427W EMP47P43555 445 aa7.74□□□□□ -1.17
RPN9YDR427W SBP1P10080 294 aaKnown RBP7.72□□□□□ -1.17
RPN9YDR427W SKN7P38889 622 aa7.71□□□□□ -1.18
RPN9YDR427W SBE2P42223 864 aaKnown RBP7.71□□□□□ -1.18
RPN9YDR427W APL6P46682 809 aa7.71□□□□□ -1.18
RPN9YDR427W YMR187CQ03236 431 aa7.71□□□□□ -1.18
RPN9YDR427W TDA6Q06466 467 aa7.71□□□□□ -1.18
RPN9YDR427W MCM16Q12262 181 aa7.71□□□□□ -1.18
Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms