RNA–Protein interactions for RNA: YDR405W

MRP20, Transcript of Mitochondrial ribosomal protein of the large subunit, yeast

Gene MRP20, Length 792 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MRP20	YDR405W	PSD2	P53037	1138 aa	Known RBP	12.94	□□□□□ -0.34
MRP20	YDR405W	GRX1	P25373	110 aa	Known RBP	12.93	□□□□□ -0.34
MRP20	YDR405W	HSP104	P31539	908 aa	Known RBP	12.93	□□□□□ -0.34
MRP20	YDR405W	NST1	P53935	1240 aa		12.93	□□□□□ -0.34
MRP20	YDR405W	BDF1	P35817	686 aa		12.92	□□□□□ -0.34
MRP20	YDR405W	CTH1	P47976	325 aa		12.92	□□□□□ -0.34
MRP20	YDR405W	AOS1	Q06624	347 aa		12.9	□□□□□ -0.34
MRP20	YDR405W	RAD4	P14736	754 aa		12.89	□□□□□ -0.35
MRP20	YDR405W	YBP2	P53169	641 aa		12.89	□□□□□ -0.35
MRP20	YDR405W	ALD3	P54114	506 aa		12.88	□□□□□ -0.35
MRP20	YDR405W	NUP145	P49687	1317 aa		12.88	□□□□□ -0.35
MRP20	YDR405W	BUG1	Q12191	341 aa		12.85	□□□□□ -0.35
MRP20	YDR405W	NTH2	P35172	780 aa		12.84	□□□□□ -0.35
MRP20	YDR405W	GRE2	Q12068	342 aa	Known RBP	12.84	□□□□□ -0.35
MRP20	YDR405W	KCC4	P25389	1037 aa		12.83	□□□□□ -0.36
MRP20	YDR405W	UTP22	P53254	1237 aa	Predicted RBP	12.83	□□□□□ -0.36
MRP20	YDR405W	RPG1	P38249	964 aa	Known RBP	12.82	□□□□□ -0.36
MRP20	YDR405W	RRP46	P53256	223 aa	Predicted RBP	12.82	□□□□□ -0.36
MRP20	YDR405W	RTR1	P40084	226 aa	Predicted RBP	12.8	□□□□□ -0.36
MRP20	YDR405W	YNL050C	P53952	270 aa		12.8	□□□□□ -0.36
MRP20	YDR405W	RMT2	Q03305	412 aa		12.79	□□□□□ -0.36
MRP20	YDR405W	UGA3	P26370	528 aa		12.78	□□□□□ -0.36
MRP20	YDR405W	MDG1	P53885	366 aa		12.78	□□□□□ -0.36
MRP20	YDR405W	PRD1	P25375	712 aa		12.77	□□□□□ -0.37
MRP20	YDR405W	TUM1	Q08686	304 aa	Known RBP	12.77	□□□□□ -0.37
MRP20	YDR405W	RIM15	P43565	1770 aa		12.75	□□□□□ -0.37
MRP20	YDR405W	NSE3	Q05541	303 aa		12.75	□□□□□ -0.37
MRP20	YDR405W	TOS1	P38288	455 aa		12.74	□□□□□ -0.37
MRP20	YDR405W	NOP53	Q12080	455 aa	Known RBP	12.73	□□□□□ -0.37
MRP20	YDR405W	MAM1	P40065	302 aa		12.72	□□□□□ -0.37
MRP20	YDR405W	SAP155	P43612	1002 aa		12.72	□□□□□ -0.37
MRP20	YDR405W	ZDS1	P50111	915 aa	Known RBP	12.71	□□□□□ -0.37
MRP20	YDR405W	ALE1	Q08548	619 aa		12.71	□□□□□ -0.37
MRP20	YDR405W	PHM7	Q12252	991 aa		12.71	□□□□□ -0.37
MRP20	YDR405W	HPC2	Q01448	625 aa		12.7	□□□□□ -0.38
MRP20	YDR405W	NYV1	Q12255	253 aa		12.7	□□□□□ -0.38
MRP20	YDR405W	LYS2	P07702	1392 aa		12.69	□□□□□ -0.38
MRP20	YDR405W	SSA1	P10591	642 aa	Known RBP	12.69	□□□□□ -0.38
MRP20	YDR405W	SSP2	Q08646	371 aa		12.69	□□□□□ -0.38
MRP20	YDR405W	YFR016C	P43597	1233 aa	Known RBP	12.68	□□□□□ -0.38
MRP20	YDR405W	TEA1	P47988	759 aa		12.68	□□□□□ -0.38
MRP20	YDR405W	RRT14	P40470	206 aa		12.67	□□□□□ -0.38
MRP20	YDR405W	BUD27	P43573	796 aa	Known RBP RIP-Chip data	12.66	□□□□□ -0.38	not detected
MRP20	YDR405W	THI22	Q06490	572 aa		12.66	□□□□□ -0.38
MRP20	YDR405W	YDL144C	Q07589	356 aa		12.66	□□□□□ -0.38
MRP20	YDR405W	MPP10	P47083	593 aa	Known RBP	12.65	□□□□□ -0.38
MRP20	YDR405W	RPP0	P05317	312 aa	Known RBP	12.64	□□□□□ -0.39
MRP20	YDR405W	GYP7	P48365	746 aa		12.64	□□□□□ -0.39
MRP20	YDR405W	NSR1	P27476	414 aa	Known RBP RIP-Chip data	12.63	□□□□□ -0.39	not detected
MRP20	YDR405W	BMS1	Q08965	1183 aa	Known RBP	12.63	□□□□□ -0.39
MRP20	YDR405W	SER1	P33330	395 aa	Known RBP	12.61	□□□□□ -0.39
MRP20	YDR405W	YKL222C	P35995	705 aa		12.61	□□□□□ -0.39
MRP20	YDR405W	MSN5	P52918	1224 aa		12.61	□□□□□ -0.39
MRP20	YDR405W	RIX7	Q07844	837 aa	Known RBP	12.61	□□□□□ -0.39
MRP20	YDR405W	COQ4	O13525	335 aa		12.6	□□□□□ -0.39
MRP20	YDR405W	CTT1	P06115	562 aa		12.6	□□□□□ -0.39
MRP20	YDR405W	LPD1	P09624	499 aa	Known RBP	12.6	□□□□□ -0.39
MRP20	YDR405W	RAT1	Q02792	1006 aa	Known RBP	12.6	□□□□□ -0.39
MRP20	YDR405W	RTT109	Q07794	436 aa		12.6	□□□□□ -0.39
MRP20	YDR405W	EAF6	P47128	113 aa		12.59	□□□□□ -0.39
MRP20	YDR405W	ERT1	P38140	529 aa		12.58	□□□□□ -0.4
MRP20	YDR405W	HEF3	P53978	1044 aa	Known RBP	12.58	□□□□□ -0.4
MRP20	YDR405W	DIB1	Q06819	143 aa	Predicted RBP	12.58	□□□□□ -0.4
MRP20	YDR405W	YGL082W	P53155	381 aa		12.57	□□□□□ -0.4
MRP20	YDR405W	CTI6	Q08923	506 aa		12.57	□□□□□ -0.4
MRP20	YDR405W	TPD3	P31383	635 aa		12.56	□□□□□ -0.4
MRP20	YDR405W	PFF1	P38244	976 aa		12.56	□□□□□ -0.4
MRP20	YDR405W	YOL057W	Q08225	711 aa		12.56	□□□□□ -0.4
MRP20	YDR405W	ARG8	P18544	423 aa		12.55	□□□□□ -0.4
MRP20	YDR405W	VPS27	P40343	622 aa	Known RBP	12.55	□□□□□ -0.4
MRP20	YDR405W	YPR204W	Q08995	1032 aa		12.54	□□□□□ -0.4
MRP20	YDR405W	YER156C	P40093	338 aa	Known RBP	12.53	□□□□□ -0.4
MRP20	YDR405W	DNM1	P54861	757 aa		12.53	□□□□□ -0.4
MRP20	YDR405W	YBR287W	P38355	427 aa		12.52	□□□□□ -0.41
MRP20	YDR405W	CWH41	P53008	833 aa		12.51	□□□□□ -0.41
MRP20	YDR405W	BDF2	Q07442	638 aa		12.51	□□□□□ -0.41
MRP20	YDR405W	SSK22	P25390	1331 aa	Predicted RBP	12.51	□□□□□ -0.41
MRP20	YDR405W	SRT1	Q03175	343 aa		12.5	□□□□□ -0.41
MRP20	YDR405W	YLR271W	Q06152	274 aa		12.5	□□□□□ -0.41
MRP20	YDR405W	CDC45	Q08032	650 aa		12.5	□□□□□ -0.41
MRP20	YDR405W	HAT1	Q12341	374 aa		12.5	□□□□□ -0.41
MRP20	YDR405W	DCD1	P06773	312 aa		12.49	□□□□□ -0.41
MRP20	YDR405W	APL2	P36000	726 aa	Predicted RBP	12.49	□□□□□ -0.41
MRP20	YDR405W	ZDS2	P54786	942 aa		12.49	□□□□□ -0.41
MRP20	YDR405W	VPS64	Q03944	604 aa		12.49	□□□□□ -0.41
MRP20	YDR405W	IRC3	Q06683	689 aa		12.49	□□□□□ -0.41
MRP20	YDR405W	RPS9B	P05755	195 aa	Known RBP	12.48	□□□□□ -0.41
MRP20	YDR405W	CST6	P40535	587 aa		12.48	□□□□□ -0.41
MRP20	YDR405W	KIN4	Q01919	800 aa		12.48	□□□□□ -0.41
MRP20	YDR405W	UTP10	P42945	1769 aa	Known RBP	12.48	□□□□□ -0.41
MRP20	YDR405W	SUI2	P20459	304 aa	Known RBP	12.47	□□□□□ -0.41
MRP20	YDR405W	SIT4	P20604	311 aa		12.47	□□□□□ -0.41
MRP20	YDR405W	YJR008W	P47085	338 aa		12.47	□□□□□ -0.41
MRP20	YDR405W	YRB30	P53107	440 aa	Predicted RBP	12.47	□□□□□ -0.41
MRP20	YDR405W	ERO1	Q03103	563 aa		12.47	□□□□□ -0.41
MRP20	YDR405W	YDR306C	Q06640	478 aa		12.46	□□□□□ -0.41
MRP20	YDR405W	SMY1	P32364	656 aa	Known RBP	12.45	□□□□□ -0.42
MRP20	YDR405W	MAK21	Q12176	1025 aa	Known RBP	12.45	□□□□□ -0.42
MRP20	YDR405W	PKH1	Q03407	766 aa		12.44	□□□□□ -0.42
MRP20	YDR405W	SYF1	Q04048	859 aa	Predicted RBP	12.44	□□□□□ -0.42

Retrieved 100 of 5,963 RNA–protein pairs in 101.3 ms