RNA–Protein interactions for RNA: YDR378C

LSM6, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM6, Length 261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM6YDR378C EMP47P43555 445 aa8.48□□□□□ -1.05
LSM6YDR378C ISF1P32488 338 aa8.47□□□□□ -1.05
LSM6YDR378C ENV9Q08651 330 aa8.47□□□□□ -1.05
LSM6YDR378C SSA1P10591 642 aaKnown RBP8.46□□□□□ -1.06
LSM6YDR378C BCK2P33306 851 aa8.46□□□□□ -1.06
LSM6YDR378C RRD1P40454 393 aaKnown RBP8.46□□□□□ -1.06
LSM6YDR378C MOD5P07884 428 aa8.45□□□□□ -1.06
LSM6YDR378C MRX12P47084 519 aa8.45□□□□□ -1.06
LSM6YDR378C FRA1Q07825 749 aa8.44□□□□□ -1.06
LSM6YDR378C VAC17P25591 423 aa8.43□□□□□ -1.06
LSM6YDR378C ATG3P40344 310 aa8.43□□□□□ -1.06
LSM6YDR378C KIP2P28743 706 aa8.41□□□□□ -1.06
LSM6YDR378C YPR084WQ06821 456 aa8.41□□□□□ -1.06
LSM6YDR378C RDS2P19541 446 aaKnown RBP8.39□□□□□ -1.07
LSM6YDR378C GEF1P37020 779 aa8.39□□□□□ -1.07
LSM6YDR378C YEL077CQ3E7X8 1277 aa8.39□□□□□ -1.07
LSM6YDR378C PEP12P32854 288 aa8.38□□□□□ -1.07
LSM6YDR378C IXR1P33417 597 aa8.38□□□□□ -1.07
LSM6YDR378C TGL4P36165 910 aa8.38□□□□□ -1.07
LSM6YDR378C XDJ1P39102 459 aa8.38□□□□□ -1.07
LSM6YDR378C BDP1P46678 594 aa8.38□□□□□ -1.07
LSM6YDR378C KTR7P40504 517 aa8.37□□□□□ -1.07
LSM6YDR378C RPL34AP87262 121 aaPredicted RBP8.37□□□□□ -1.07
LSM6YDR378C FRK1Q03002 865 aaPredicted RBP8.37□□□□□ -1.07
LSM6YDR378C SDH2P21801 266 aa8.36□□□□□ -1.07
LSM6YDR378C SYH1Q02875 849 aaKnown RBP8.36□□□□□ -1.07
LSM6YDR378C PUS5Q06244 254 aa8.36□□□□□ -1.07
LSM6YDR378C NOB1Q08444 459 aaKnown RBP8.36□□□□□ -1.07
LSM6YDR378C PUP1P25043 261 aa8.35□□□□□ -1.07
LSM6YDR378C UTP13Q05946 817 aaKnown RBP8.35□□□□□ -1.07
LSM6YDR378C SOH1P38633 127 aa8.34□□□□□ -1.07
LSM6YDR378C CST6P40535 587 aa8.33□□□□□ -1.08
LSM6YDR378C ECM23Q02710 187 aa8.32□□□□□ -1.08
LSM6YDR378C APL6P46682 809 aa8.31□□□□□ -1.08
LSM6YDR378C ITT1Q04638 464 aa8.31□□□□□ -1.08
LSM6YDR378C GAL2P13181 574 aa8.3□□□□□ -1.08
LSM6YDR378C YML083CQ04526 418 aa8.3□□□□□ -1.08
LSM6YDR378C ISR1Q06098 443 aaKnown RBP8.29□□□□□ -1.08
LSM6YDR378C ATG20Q07528 640 aa8.29□□□□□ -1.08
LSM6YDR378C AMS1P22855 1083 aa8.28□□□□□ -1.08
LSM6YDR378C PHO87P25360 923 aa8.27□□□□□ -1.09
LSM6YDR378C APP1P53933 587 aa8.27□□□□□ -1.09
LSM6YDR378C UBX7P38349 436 aa8.26□□□□□ -1.09
LSM6YDR378C EMW1P42842 904 aaKnown RBP8.26□□□□□ -1.09
LSM6YDR378C HAP4P14064 554 aa8.25□□□□□ -1.09
LSM6YDR378C SLX8P40072 274 aa8.25□□□□□ -1.09
LSM6YDR378C HED1Q03937 162 aa8.25□□□□□ -1.09
LSM6YDR378C YFL034WP43564 1073 aa8.24□□□□□ -1.09
LSM6YDR378C TSC13Q99190 310 aa8.24□□□□□ -1.09
LSM6YDR378C CBC2Q08920 208 aaKnown RBP RIP-Chip data8.23□□□□□ -1.09not detected
LSM6YDR378C MIP1P15801 1254 aa8.22□□□□□ -1.09
LSM6YDR378C PDI1P17967 522 aaKnown RBP8.22□□□□□ -1.09
LSM6YDR378C CDC3P32457 520 aaKnown RBP8.22□□□□□ -1.09
LSM6YDR378C HAL5P38970 855 aaKnown RBP8.22□□□□□ -1.09
LSM6YDR378C MKS1P34072 584 aa8.21□□□□□ -1.1
LSM6YDR378C ACS2P52910 683 aaKnown RBP8.21□□□□□ -1.1
LSM6YDR378C HDA3Q06623 655 aa8.21□□□□□ -1.1
LSM6YDR378C MRT4P33201 236 aaKnown RBP8.2□□□□□ -1.1
LSM6YDR378C FBP26P32604 452 aa8.19□□□□□ -1.1
LSM6YDR378C AIM9P40053 627 aaKnown RBP8.19□□□□□ -1.1
LSM6YDR378C ISU1Q03020 165 aa8.19□□□□□ -1.1
LSM6YDR378C GAS4Q08271 471 aa8.19□□□□□ -1.1
LSM6YDR378C RAS1P01119 309 aa8.18□□□□□ -1.1
LSM6YDR378C RPP2BP02400 110 aaKnown RBP8.18□□□□□ -1.1
LSM6YDR378C PUF6Q04373 656 aaKnown RBP8.17□□□□□ -1.1
LSM6YDR378C DAT1P13483 248 aaKnown RBP8.16□□□□□ -1.1
LSM6YDR378C UTR2P32623 467 aa8.16□□□□□ -1.1
LSM6YDR378C TBS1P38114 1094 aa8.16□□□□□ -1.1
LSM6YDR378C ROM1P53046 1155 aa8.16□□□□□ -1.1
LSM6YDR378C YML020WQ03722 664 aa8.16□□□□□ -1.1
LSM6YDR378C SPT2P06843 333 aaPredicted RBP8.15□□□□□ -1.1
LSM6YDR378C VAN1P23642 535 aa8.15□□□□□ -1.1
LSM6YDR378C NTH2P35172 780 aa8.15□□□□□ -1.1
LSM6YDR378C YBL086CP38177 466 aa8.15□□□□□ -1.1
LSM6YDR378C RTT106P40161 455 aa8.15□□□□□ -1.1
LSM6YDR378C BDS1Q08347 646 aa8.15□□□□□ -1.1
LSM6YDR378C CLA4P48562 842 aa8.14□□□□□ -1.11
LSM6YDR378C DFG5Q05031 458 aa8.14□□□□□ -1.11
LSM6YDR378C DPS1P04802 557 aaKnown RBP8.13□□□□□ -1.11
LSM6YDR378C STE6P12866 1290 aa8.13□□□□□ -1.11
LSM6YDR378C CDC4P07834 779 aa8.11□□□□□ -1.11
LSM6YDR378C RPS6AP0CX37 236 aaKnown RBP8.11□□□□□ -1.11
LSM6YDR378C RPS6BP0CX38 236 aaPredicted RBP8.11□□□□□ -1.11
LSM6YDR378C HST3P53687 447 aa8.11□□□□□ -1.11
LSM6YDR378C CWC15Q03772 175 aaKnown RBP8.11□□□□□ -1.11
LSM6YDR378C PUN1Q06991 263 aa8.11□□□□□ -1.11
LSM6YDR378C MET32Q12041 191 aa8.11□□□□□ -1.11
LSM6YDR378C HAT1Q12341 374 aa8.11□□□□□ -1.11
LSM6YDR378C TRS33Q99394 268 aa8.11□□□□□ -1.11
LSM6YDR378C UGA3P26370 528 aa8.1□□□□□ -1.11
LSM6YDR378C WTM2Q12206 467 aa8.1□□□□□ -1.11
LSM6YDR378C CYT1P07143 309 aa8.09□□□□□ -1.11
LSM6YDR378C SWI5P08153 709 aa8.09□□□□□ -1.11
LSM6YDR378C SLD2P34252 453 aa8.09□□□□□ -1.11
LSM6YDR378C CWH41P53008 833 aa8.09□□□□□ -1.11
LSM6YDR378C DLD3P39976 496 aaKnown RBP8.08□□□□□ -1.12
LSM6YDR378C AIR1P40507 360 aaKnown RBP8.08□□□□□ -1.12
LSM6YDR378C SRS2P12954 1174 aa8.07□□□□□ -1.12
LSM6YDR378C ASH1P34233 588 aa8.07□□□□□ -1.12
LSM6YDR378C AFT1P22149 690 aa8.06□□□□□ -1.12
Retrieved 100 of 5,963 RNA–protein pairs in 11.9 ms