RNA–Protein interactions for RNA: YDL111C

RRP42, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP42, Length 798 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP42YDL111C GLN1P32288 370 aaKnown RBP6.21□□□□□ -1.42
RRP42YDL111C MRT4P33201 236 aaKnown RBP6.21□□□□□ -1.42
RRP42YDL111C HPF1Q05164 967 aa6.21□□□□□ -1.42
RRP42YDL111C MIP1P15801 1254 aa6.2□□□□□ -1.42
RRP42YDL111C GLY1P37303 387 aaKnown RBP6.2□□□□□ -1.42
RRP42YDL111C RTT106P40161 455 aa6.2□□□□□ -1.42
RRP42YDL111C AIM7Q12156 149 aa6.2□□□□□ -1.42
RRP42YDL111C NUP85P46673 744 aa6.19□□□□□ -1.42
RRP42YDL111C ESS1P22696 170 aa6.18□□□□□ -1.42
RRP42YDL111C TY1A-BLQ12266 440 aa6.17□□□□□ -1.42
RRP42YDL111C KTR1P27810 393 aaKnown RBP6.15□□□□□ -1.42
RRP42YDL111C YJU3P28321 313 aa6.15□□□□□ -1.42
RRP42YDL111C RSC30P38781 883 aa6.15□□□□□ -1.42
RRP42YDL111C VAC17P25591 423 aa6.14□□□□□ -1.43
RRP42YDL111C LSC2P53312 427 aa6.12□□□□□ -1.43
RRP42YDL111C ARG82P07250 355 aa6.11□□□□□ -1.43
RRP42YDL111C DLD1P32891 587 aa6.11□□□□□ -1.43
RRP42YDL111C CSN12P47130 423 aa6.11□□□□□ -1.43
RRP42YDL111C AAD14P42884 376 aa6.1□□□□□ -1.43
RRP42YDL111C UBP2Q01476 1272 aa6.1□□□□□ -1.43
RRP42YDL111C PKH3Q03306 898 aaPredicted RBP6.09□□□□□ -1.43
RRP42YDL111C ITT1Q04638 464 aa6.09□□□□□ -1.43
RRP42YDL111C YBL086CP38177 466 aa6.08□□□□□ -1.44
RRP42YDL111C YPR204WQ08995 1032 aa6.08□□□□□ -1.44
RRP42YDL111C APP1P53933 587 aa6.07□□□□□ -1.44
RRP42YDL111C TCB1Q12466 1186 aa6.07□□□□□ -1.44
RRP42YDL111C ARG8P18544 423 aa6.06□□□□□ -1.44
RRP42YDL111C EMW1P42842 904 aaKnown RBP6.06□□□□□ -1.44
RRP42YDL111C RPN1P38764 993 aaKnown RBP6.05□□□□□ -1.44
RRP42YDL111C ROG3P43602 733 aa6.05□□□□□ -1.44
RRP42YDL111C YJR098CP47139 656 aa6.05□□□□□ -1.44
RRP42YDL111C PUS1Q12211 544 aaKnown RBP6.05□□□□□ -1.44
RRP42YDL111C KIN1P13185 1064 aa6.03□□□□□ -1.44
RRP42YDL111C ICP55P40051 511 aa6.03□□□□□ -1.44
RRP42YDL111C LSB3P43603 459 aaKnown RBP6.03□□□□□ -1.44
RRP42YDL111C RAD59Q12223 238 aa6.03□□□□□ -1.44
RRP42YDL111C FIG4P42837 879 aa6.02□□□□□ -1.45
RRP42YDL111C TY1A-MR1Q04215 440 aa6.01□□□□□ -1.45
RRP42YDL111C SSA2P10592 639 aaKnown RBP6□□□□□ -1.45
RRP42YDL111C OSH7P38755 437 aa6□□□□□ -1.45
RRP42YDL111C MDJ1P35191 511 aa5.99□□□□□ -1.45
RRP42YDL111C DPH6Q12429 685 aa5.99□□□□□ -1.45
RRP42YDL111C CCP1P00431 361 aa5.97□□□□□ -1.45
RRP42YDL111C MKS1P34072 584 aa5.97□□□□□ -1.45
RRP42YDL111C TEC1P18412 486 aa5.96□□□□□ -1.46
RRP42YDL111C DFG5Q05031 458 aa5.96□□□□□ -1.46
RRP42YDL111C YPR084WQ06821 456 aa5.96□□□□□ -1.46
RRP42YDL111C MAK16P10962 306 aaPredicted RBP5.95□□□□□ -1.46
RRP42YDL111C NSG2P53898 299 aa5.95□□□□□ -1.46
RRP42YDL111C PHM7Q12252 991 aa5.95□□□□□ -1.46
RRP42YDL111C GUA1P38625 525 aaKnown RBP5.94□□□□□ -1.46
RRP42YDL111C FBP26P32604 452 aa5.93□□□□□ -1.46
RRP42YDL111C LYS5P50113 272 aa5.93□□□□□ -1.46
RRP42YDL111C BDS1Q08347 646 aa5.93□□□□□ -1.46
RRP42YDL111C STE6P12866 1290 aa5.92□□□□□ -1.46
RRP42YDL111C GUT2P32191 649 aa5.91□□□□□ -1.46
RRP42YDL111C JJJ3P47138 172 aa5.91□□□□□ -1.46
RRP42YDL111C NAF1P53919 492 aaKnown RBP5.91□□□□□ -1.46
RRP42YDL111C DMA2P53924 522 aa5.9□□□□□ -1.46
RRP42YDL111C THI72Q08579 599 aa5.9□□□□□ -1.46
RRP42YDL111C CSE4P36012 229 aa5.89□□□□□ -1.47
RRP42YDL111C NAM8Q00539 523 aaKnown RBP5.89□□□□□ -1.47
RRP42YDL111C HPC2Q01448 625 aa5.89□□□□□ -1.47
RRP42YDL111C VTC4P47075 721 aa5.88□□□□□ -1.47
RRP42YDL111C CDC19P00549 500 aaKnown RBP5.87□□□□□ -1.47
RRP42YDL111C NRD1P53617 575 aaKnown RBP RIP-Chip data5.87□□□□□ -1.47 RIP-Chip
RRP42YDL111C ISU1Q03020 165 aa5.87□□□□□ -1.47
RRP42YDL111C FRA1Q07825 749 aa5.87□□□□□ -1.47
RRP42YDL111C ATG20Q07528 640 aa5.86□□□□□ -1.47
RRP42YDL111C STE20Q03497 939 aaKnown RBP5.85□□□□□ -1.47
RRP42YDL111C RPP2BP02400 110 aaKnown RBP5.84□□□□□ -1.47
RRP42YDL111C SPT5P27692 1063 aaKnown RBP5.84□□□□□ -1.47
RRP42YDL111C AI1P03875 834 aa5.83□□□□□ -1.48
RRP42YDL111C DAL1P32375 460 aa5.83□□□□□ -1.48
RRP42YDL111C CUZ1P53899 274 aa5.83□□□□□ -1.48
RRP42YDL111C MRX12P47084 519 aa5.82□□□□□ -1.48
RRP42YDL111C YBL036CP38197 257 aa5.81□□□□□ -1.48
RRP42YDL111C CEM1P39525 442 aa5.81□□□□□ -1.48
RRP42YDL111C DLD3P39976 496 aaKnown RBP5.81□□□□□ -1.48
RRP42YDL111C RLF2Q12495 606 aa5.81□□□□□ -1.48
RRP42YDL111C BRL1P38770 471 aa5.8□□□□□ -1.48
RRP42YDL111C APL6P46682 809 aa5.8□□□□□ -1.48
RRP42YDL111C TFB3Q03290 321 aa5.8□□□□□ -1.48
RRP42YDL111C YFL066CP43538 392 aa5.79□□□□□ -1.48
RRP42YDL111C EMP47P43555 445 aa5.79□□□□□ -1.48
RRP42YDL111C CCT8P47079 568 aaKnown RBP5.79□□□□□ -1.48
RRP42YDL111C MCM16Q12262 181 aa5.79□□□□□ -1.48
RRP42YDL111C SBP1P10080 294 aaKnown RBP5.78□□□□□ -1.48
RRP42YDL111C PKC1P24583 1151 aa5.78□□□□□ -1.48
RRP42YDL111C YDJ1P25491 409 aaKnown RBP5.78□□□□□ -1.48
RRP42YDL111C YPR053CQ6Q5F3 151 aa5.78□□□□□ -1.48
RRP42YDL111C SPT2P06843 333 aaPredicted RBP5.77□□□□□ -1.49
RRP42YDL111C ISF1P32488 338 aa5.77□□□□□ -1.49
RRP42YDL111C MSN5P52918 1224 aa5.77□□□□□ -1.49
RRP42YDL111C HGH1P48362 394 aaKnown RBP5.76□□□□□ -1.49
RRP42YDL111C ISR1Q06098 443 aaKnown RBP5.76□□□□□ -1.49
RRP42YDL111C WTM2Q12206 467 aa5.76□□□□□ -1.49
RRP42YDL111C SBE2P42223 864 aaKnown RBP5.75□□□□□ -1.49
RRP42YDL111C UBP15P50101 1230 aa5.75□□□□□ -1.49
RRP42YDL111C YMR265CQ03508 461 aaKnown RBP5.75□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 13.3 ms