RNA–Protein interactions for RNA: YDL085W

NDE2, Transcript of Mitochondrial external NADH dehydrogenase, yeastyeast

Gene NDE2, Length 1,638 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NDE2YDL085W FKS3Q04952 1785 aa9.56□□□□□ -0.88
NDE2YDL085W RRP5Q05022 1729 aaKnown RBP9.56□□□□□ -0.88
NDE2YDL085W PRP45P28004 379 aaPredicted RBP9.56□□□□□ -0.88
NDE2YDL085W YPP1P46951 817 aa9.56□□□□□ -0.88
NDE2YDL085W SRT1Q03175 343 aa9.56□□□□□ -0.88
NDE2YDL085W PCT1P13259 424 aa9.54□□□□□ -0.88
NDE2YDL085W SIS2P36024 562 aa9.54□□□□□ -0.88
NDE2YDL085W TRP5P00931 707 aaKnown RBP9.53□□□□□ -0.88
NDE2YDL085W BMS1Q08965 1183 aaKnown RBP9.53□□□□□ -0.88
NDE2YDL085W TCB1Q12466 1186 aa9.53□□□□□ -0.88
NDE2YDL085W LYS2P07702 1392 aa9.53□□□□□ -0.88
NDE2YDL085W URB1P34241 1764 aaKnown RBP9.52□□□□□ -0.88
NDE2YDL085W YIL177CP40434 1758 aa9.52□□□□□ -0.89
NDE2YDL085W YJL225CP40889 1758 aa9.52□□□□□ -0.89
NDE2YDL085W ROX1P25042 368 aa9.52□□□□□ -0.89
NDE2YDL085W KCC4P25389 1037 aa9.52□□□□□ -0.89
NDE2YDL085W PTP3P40048 928 aa9.51□□□□□ -0.89
NDE2YDL085W NOP8Q08287 484 aaPredicted RBP9.51□□□□□ -0.89
NDE2YDL085W RPS19AP07280 144 aaKnown RBP9.5□□□□□ -0.89
NDE2YDL085W RPS19BP07281 144 aaPredicted RBP9.5□□□□□ -0.89
NDE2YDL085W YNG2P38806 282 aaKnown RBP9.5□□□□□ -0.89
NDE2YDL085W MSB3P48566 633 aaPredicted RBP9.5□□□□□ -0.89
NDE2YDL085W VPS24P36095 224 aaKnown RBP9.49□□□□□ -0.89
NDE2YDL085W COQ4O13525 335 aa9.49□□□□□ -0.89
NDE2YDL085W YBR287WP38355 427 aa9.49□□□□□ -0.89
NDE2YDL085W XKS1P42826 600 aa9.49□□□□□ -0.89
NDE2YDL085W RCR1P38212 213 aa9.48□□□□□ -0.89
NDE2YDL085W HGH1P48362 394 aaKnown RBP9.48□□□□□ -0.89
NDE2YDL085W CSI1Q04368 295 aa9.48□□□□□ -0.89
NDE2YDL085W YOL057WQ08225 711 aa9.47□□□□□ -0.89
NDE2YDL085W MEC3Q02574 474 aa9.46□□□□□ -0.89
NDE2YDL085W RSF2P46974 1380 aa9.46□□□□□ -0.9
NDE2YDL085W MIF2P35201 549 aa9.45□□□□□ -0.9
NDE2YDL085W DJP1P40564 432 aa9.45□□□□□ -0.9
NDE2YDL085W LSP1Q12230 341 aaKnown RBP9.45□□□□□ -0.9
NDE2YDL085W NMD2P38798 1089 aaKnown RBP9.44□□□□□ -0.9
NDE2YDL085W SPO1P53541 631 aa9.44□□□□□ -0.9
NDE2YDL085W RAD50P12753 1312 aa9.44□□□□□ -0.9
NDE2YDL085W NUP145P49687 1317 aa9.44□□□□□ -0.9
NDE2YDL085W MRP7P12687 371 aa9.42□□□□□ -0.9
NDE2YDL085W RAD4P14736 754 aa9.42□□□□□ -0.9
NDE2YDL085W MSP1P28737 362 aa9.42□□□□□ -0.9
NDE2YDL085W RFC1P38630 861 aaKnown RBP9.42□□□□□ -0.9
NDE2YDL085W DNM1P54861 757 aa9.42□□□□□ -0.9
NDE2YDL085W NKP2Q06162 153 aa9.42□□□□□ -0.9
NDE2YDL085W INP54Q08227 384 aaKnown RBP9.42□□□□□ -0.9
NDE2YDL085W SLN1P39928 1220 aaPredicted RBP9.41□□□□□ -0.9
NDE2YDL085W GCD7P32502 381 aaPredicted RBP9.4□□□□□ -0.9
NDE2YDL085W RLF2Q12495 606 aa9.4□□□□□ -0.9
NDE2YDL085W MNN4P36044 1178 aa9.39□□□□□ -0.91
NDE2YDL085W YDR306CQ06640 478 aa9.39□□□□□ -0.91
NDE2YDL085W RAD24P32641 659 aa9.38□□□□□ -0.91
NDE2YDL085W CST6P40535 587 aa9.38□□□□□ -0.91
NDE2YDL085W CDC16P09798 840 aa9.38□□□□□ -0.91
NDE2YDL085W BOI2P39969 1040 aa9.38□□□□□ -0.91
NDE2YDL085W ITC1P53125 1264 aa9.38□□□□□ -0.91
NDE2YDL085W OSM1P21375 501 aaKnown RBP9.37□□□□□ -0.91
NDE2YDL085W ILV3P39522 585 aaKnown RBP9.37□□□□□ -0.91
NDE2YDL085W IES2P40154 320 aa9.37□□□□□ -0.91
NDE2YDL085W GCR2Q01722 534 aa9.37□□□□□ -0.91
NDE2YDL085W ATG13Q06628 738 aa9.37□□□□□ -0.91
NDE2YDL085W ENT1Q12518 454 aa9.37□□□□□ -0.91
NDE2YDL085W ARL1P38116 183 aaKnown RBP9.36□□□□□ -0.91
NDE2YDL085W ALE1Q08548 619 aa9.36□□□□□ -0.91
NDE2YDL085W ROM2P51862 1356 aaKnown RBP9.36□□□□□ -0.91
NDE2YDL085W YJR008WP47085 338 aa9.35□□□□□ -0.91
NDE2YDL085W RMT2Q03305 412 aa9.35□□□□□ -0.91
NDE2YDL085W NCB2Q92317 146 aa9.35□□□□□ -0.91
NDE2YDL085W SRS2P12954 1174 aa9.34□□□□□ -0.91
NDE2YDL085W DLD1P32891 587 aa9.34□□□□□ -0.91
NDE2YDL085W YBP2P53169 641 aa9.34□□□□□ -0.91
NDE2YDL085W REB1P21538 810 aa9.34□□□□□ -0.91
NDE2YDL085W YKL133CP36066 463 aa9.34□□□□□ -0.91
NDE2YDL085W SSF1P38789 453 aaPredicted RBP9.34□□□□□ -0.91
NDE2YDL085W NUP133P36161 1157 aa9.33□□□□□ -0.92
NDE2YDL085W BDP1P46678 594 aa9.33□□□□□ -0.92
NDE2YDL085W TEA1P47988 759 aa9.33□□□□□ -0.92
NDE2YDL085W TCB2P48231 1178 aa9.33□□□□□ -0.92
NDE2YDL085W YGR122WP53272 402 aa9.33□□□□□ -0.92
NDE2YDL085W MDG1P53885 366 aa9.33□□□□□ -0.92
NDE2YDL085W ADE16P54113 591 aaKnown RBP9.33□□□□□ -0.92
NDE2YDL085W SSP2Q08646 371 aa9.33□□□□□ -0.92
NDE2YDL085W NOT3P06102 836 aaKnown RBP9.32□□□□□ -0.92
NDE2YDL085W VAS1P07806 1104 aaKnown RBP9.32□□□□□ -0.92
NDE2YDL085W COG8Q04632 607 aa9.32□□□□□ -0.92
NDE2YDL085W YRF1-3P0CX14 1859 aa9.32□□□□□ -0.92
NDE2YDL085W YRF1-7P0CX15 1859 aa9.32□□□□□ -0.92
NDE2YDL085W YRF1-6P53819 1859 aa9.32□□□□□ -0.92
NDE2YDL085W ENV9Q08651 330 aa9.31□□□□□ -0.92
NDE2YDL085W SUP35P05453 685 aaKnown RBP9.31□□□□□ -0.92
NDE2YDL085W BRN1P38170 754 aa9.31□□□□□ -0.92
NDE2YDL085W YAH1Q12184 172 aaKnown RBP9.31□□□□□ -0.92
NDE2YDL085W SWC3P31376 625 aa9.3□□□□□ -0.92
NDE2YDL085W UBP12P39538 1254 aa9.3□□□□□ -0.92
NDE2YDL085W NOP53Q12080 455 aaKnown RBP9.3□□□□□ -0.92
NDE2YDL085W SWI1P09547 1314 aa9.29□□□□□ -0.92
NDE2YDL085W RNR2P09938 399 aaKnown RBP9.29□□□□□ -0.92
NDE2YDL085W ZDS2P54786 942 aa9.29□□□□□ -0.92
NDE2YDL085W KNS1P32350 737 aaPredicted RBP9.28□□□□□ -0.92
NDE2YDL085W HAP5Q02516 242 aa9.28□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms