RNA–Protein interactions for RNA: YCR035C

RRP43, Transcript of Exosome non-catalytic core component, yeastyeast

Gene RRP43, Length 1,185 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RRP43YCR035C CST9Q06032 482 aa9.54□□□□□ -0.88
RRP43YCR035C YDL144CQ07589 356 aa9.54□□□□□ -0.88
RRP43YCR035C MPP10P47083 593 aaKnown RBP9.53□□□□□ -0.88
RRP43YCR035C YIL177CP40434 1758 aa9.52□□□□□ -0.88
RRP43YCR035C YJL225CP40889 1758 aa9.52□□□□□ -0.88
RRP43YCR035C PRD1P25375 712 aa9.51□□□□□ -0.89
RRP43YCR035C HSP104P31539 908 aaKnown RBP9.51□□□□□ -0.89
RRP43YCR035C YKL133CP36066 463 aa9.51□□□□□ -0.89
RRP43YCR035C PRS1P32895 427 aaKnown RBP9.5□□□□□ -0.89
RRP43YCR035C DOT5P40553 215 aa9.49□□□□□ -0.89
RRP43YCR035C URB1P34241 1764 aaKnown RBP9.48□□□□□ -0.89
RRP43YCR035C RPP0P05317 312 aaKnown RBP9.48□□□□□ -0.89
RRP43YCR035C MEC3Q02574 474 aa9.48□□□□□ -0.89
RRP43YCR035C FKS3Q04952 1785 aa9.47□□□□□ -0.89
RRP43YCR035C GLN1P32288 370 aaKnown RBP9.47□□□□□ -0.89
RRP43YCR035C NTH2P35172 780 aa9.47□□□□□ -0.89
RRP43YCR035C VPS27P40343 622 aaKnown RBP9.47□□□□□ -0.89
RRP43YCR035C CTF4Q01454 927 aa9.47□□□□□ -0.89
RRP43YCR035C THI22Q06490 572 aa9.47□□□□□ -0.89
RRP43YCR035C SIR4P11978 1358 aa9.47□□□□□ -0.89
RRP43YCR035C APC1P53886 1748 aa9.46□□□□□ -0.89
RRP43YCR035C BUD31P25337 157 aaPredicted RBP9.46□□□□□ -0.9
RRP43YCR035C SLX5P32828 619 aaKnown RBP9.46□□□□□ -0.9
RRP43YCR035C SAP155P43612 1002 aa9.46□□□□□ -0.9
RRP43YCR035C ADE16P54113 591 aaKnown RBP9.46□□□□□ -0.9
RRP43YCR035C AOS1Q06624 347 aa9.46□□□□□ -0.9
RRP43YCR035C YRF1-4O13559 1382 aa9.46□□□□□ -0.9
RRP43YCR035C TPD3P31383 635 aa9.45□□□□□ -0.9
RRP43YCR035C FOX2Q02207 900 aaKnown RBP9.45□□□□□ -0.9
RRP43YCR035C FRK1Q03002 865 aaPredicted RBP9.45□□□□□ -0.9
RRP43YCR035C CDC45Q08032 650 aa9.45□□□□□ -0.9
RRP43YCR035C INP54Q08227 384 aaKnown RBP9.45□□□□□ -0.9
RRP43YCR035C ROM2P51862 1356 aaKnown RBP9.45□□□□□ -0.9
RRP43YCR035C SNF2P22082 1703 aa9.45□□□□□ -0.9
RRP43YCR035C COBP00163 385 aa9.44□□□□□ -0.9
RRP43YCR035C SUI2P20459 304 aaKnown RBP9.44□□□□□ -0.9
RRP43YCR035C YNL050CP53952 270 aa9.44□□□□□ -0.9
RRP43YCR035C YMR074CQ04773 145 aa9.44□□□□□ -0.9
RRP43YCR035C YRF1-3P0CX14 1859 aa9.44□□□□□ -0.9
RRP43YCR035C YRF1-7P0CX15 1859 aa9.44□□□□□ -0.9
RRP43YCR035C YRF1-6P53819 1859 aa9.44□□□□□ -0.9
RRP43YCR035C DMA1P38823 416 aa9.43□□□□□ -0.9
RRP43YCR035C ATG13Q06628 738 aa9.43□□□□□ -0.9
RRP43YCR035C RTT109Q07794 436 aa9.43□□□□□ -0.9
RRP43YCR035C OSM1P21375 501 aaKnown RBP9.42□□□□□ -0.9
RRP43YCR035C RVB2Q12464 471 aaKnown RBP9.42□□□□□ -0.9
RRP43YCR035C NUP145P49687 1317 aa9.41□□□□□ -0.9
RRP43YCR035C RPN11P43588 306 aaKnown RBP9.41□□□□□ -0.9
RRP43YCR035C ZDS1P50111 915 aaKnown RBP9.41□□□□□ -0.9
RRP43YCR035C LAM6Q08001 693 aa9.4□□□□□ -0.9
RRP43YCR035C KCC4P25389 1037 aa9.39□□□□□ -0.91
RRP43YCR035C RRT14P40470 206 aa9.39□□□□□ -0.91
RRP43YCR035C YJL181WP46987 611 aa9.39□□□□□ -0.91
RRP43YCR035C HEF3P53978 1044 aaKnown RBP9.39□□□□□ -0.91
RRP43YCR035C YKR075CP36155 307 aa9.38□□□□□ -0.91
RRP43YCR035C YBR287WP38355 427 aa9.38□□□□□ -0.91
RRP43YCR035C MAM1P40065 302 aa9.38□□□□□ -0.91
RRP43YCR035C PRP40P33203 583 aaKnown RBP9.37□□□□□ -0.91
RRP43YCR035C GYP7P48365 746 aa9.37□□□□□ -0.91
RRP43YCR035C YBP2P53169 641 aa9.37□□□□□ -0.91
RRP43YCR035C NSE3Q05541 303 aa9.37□□□□□ -0.91
RRP43YCR035C MRM1P25270 412 aa9.36□□□□□ -0.91
RRP43YCR035C UGA3P26370 528 aa9.36□□□□□ -0.91
RRP43YCR035C FUN12P39730 1002 aaKnown RBP9.36□□□□□ -0.91
RRP43YCR035C BMS1Q08965 1183 aaKnown RBP9.35□□□□□ -0.91
RRP43YCR035C UBP1P25037 809 aa9.34□□□□□ -0.91
RRP43YCR035C NPR2P39923 615 aa9.34□□□□□ -0.91
RRP43YCR035C YRB30P53107 440 aaPredicted RBP9.34□□□□□ -0.91
RRP43YCR035C ALE1Q08548 619 aa9.34□□□□□ -0.91
RRP43YCR035C COQ4O13525 335 aa9.33□□□□□ -0.92
RRP43YCR035C GRX1P25373 110 aaKnown RBP9.32□□□□□ -0.92
RRP43YCR035C TUM1Q08686 304 aaKnown RBP9.32□□□□□ -0.92
RRP43YCR035C SRT1Q03175 343 aa9.31□□□□□ -0.92
RRP43YCR035C RMT2Q03305 412 aa9.31□□□□□ -0.92
RRP43YCR035C NAB6Q03735 1134 aaKnown RBP RIP-Chip data9.31□□□□□ -0.92not detected
RRP43YCR035C LYS4P49367 693 aaPredicted RBP9.3□□□□□ -0.92
RRP43YCR035C RAD4P14736 754 aa9.29□□□□□ -0.92
RRP43YCR035C DAL5P15365 543 aa9.29□□□□□ -0.92
RRP43YCR035C MAK21Q12176 1025 aaKnown RBP9.29□□□□□ -0.92
RRP43YCR035C MSB4Q12317 492 aa9.29□□□□□ -0.92
RRP43YCR035C EDE1P34216 1381 aa9.28□□□□□ -0.92
RRP43YCR035C TIF4632P39936 914 aaKnown RBP9.28□□□□□ -0.92
RRP43YCR035C YOL057WQ08225 711 aa9.28□□□□□ -0.92
RRP43YCR035C NOP53Q12080 455 aaKnown RBP9.28□□□□□ -0.92
RRP43YCR035C RAD2P07276 1031 aa9.27□□□□□ -0.93
RRP43YCR035C ZDS2P54786 942 aa9.27□□□□□ -0.93
RRP43YCR035C YIL092WP40497 633 aa9.26□□□□□ -0.93
RRP43YCR035C GRE2Q12068 342 aaKnown RBP9.26□□□□□ -0.93
RRP43YCR035C LYS2P07702 1392 aa9.24□□□□□ -0.93
RRP43YCR035C TGL3P40308 642 aa9.24□□□□□ -0.93
RRP43YCR035C BUD27P43573 796 aaKnown RBP RIP-Chip data9.24□□□□□ -0.93not detected
RRP43YCR035C YFR016CP43597 1233 aaKnown RBP9.24□□□□□ -0.93
RRP43YCR035C VPS64Q03944 604 aa9.24□□□□□ -0.93
RRP43YCR035C APL2P36000 726 aaPredicted RBP9.23□□□□□ -0.93
RRP43YCR035C SSP2Q08646 371 aa9.23□□□□□ -0.93
RRP43YCR035C RAM2P29703 316 aa9.22□□□□□ -0.93
RRP43YCR035C TEA1P47988 759 aa9.22□□□□□ -0.93
RRP43YCR035C MDG1P53885 366 aa9.22□□□□□ -0.93
RRP43YCR035C NOP8Q08287 484 aaPredicted RBP9.22□□□□□ -0.93
RRP43YCR035C PHM7Q12252 991 aa9.22□□□□□ -0.93
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms